BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000951-TA|BGIBMGA000951-PA|undefined (810 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical pr... 35 0.20 Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical pr... 35 0.20 L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 33 0.61 AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 33 0.81 AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 33 1.1 Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 32 1.9 Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 32 1.9 U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical pr... 31 2.5 Z81146-7|CAB03523.2| 517|Caenorhabditis elegans Hypothetical pr... 31 3.3 Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 31 4.3 Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical pr... 31 4.3 U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 31 4.3 U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 31 4.3 L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 31 4.3 Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 29 9.9 Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 9.9 Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 9.9 Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 9.9 U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical pr... 29 9.9 L07143-1|AAB37089.2| 532|Caenorhabditis elegans P granule abnor... 29 9.9 DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 29 9.9 AL032623-14|CAA21504.1| 465|Caenorhabditis elegans Hypothetical... 29 9.9 AB120730-1|BAC87887.1| 532|Caenorhabditis elegans PGL-2 protein. 29 9.9 >Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical protein W08G11.3b protein. Length = 511 Score = 35.1 bits (77), Expect = 0.20 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 734 NELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEI 783 NE+ SE + N +M++ IN LE+ ++ML ++ T NAT K+EEI Sbjct: 126 NEIMSER-RMMNDSKVEMANRINGLEVANRMLRDDVTQARNATEAKEEEI 174 >Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical protein W08G11.3a protein. Length = 510 Score = 35.1 bits (77), Expect = 0.20 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 734 NELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEI 783 NE+ SE + N +M++ IN LE+ ++ML ++ T NAT K+EEI Sbjct: 125 NEIMSER-RMMNDSKVEMANRINGLEVANRMLRDDVTQARNATEAKEEEI 173 >L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein C50C3.2 protein. Length = 2107 Score = 33.5 bits (73), Expect = 0.61 Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 146 TLKDCNPIQNDDRAVTFNIDYRLNQRRILMRRDVINKTDVFPAENKKTESQISLDDQSCA 205 T+K CN +DR T N++ + Q ++ VI + F ++++ ++ +D Sbjct: 376 TMKTCNEFL-EDRIQTINMEKLIFQTH---QKAVILAS--FLQNHEESPEDMNAEDIEKE 429 Query: 206 VSVAAEVRSIMDKILNSVEISIEQDTFFTGADDLERINPYQGRN-HDENYYKEVQGKIIN 264 + V + ++ +E +IE D + L +++ Y + +D N KEV +N Sbjct: 430 IRVIDGITVRCTSVVEQIE-NIE-DELRQKPEQLNQLSVYASKQVNDLNEMKEVLKTTVN 487 Query: 265 MEKNDRQ-LAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEII 306 K Q L L N E ++H D + + +K EI+ Sbjct: 488 SRKAILQRLLDVTYFLDNCCETRKHTDTMLSNVKSSRVKLEIV 530 >AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear anchorage protein1 protein. Length = 8545 Score = 33.1 bits (72), Expect = 0.81 Identities = 32/139 (23%), Positives = 67/139 (48%), Gaps = 9/139 (6%) Query: 180 INKTDVFPAENKKTESQISLDDQSCAVSVAAE--VRSIMDKILNSVEISIEQDTFFTGAD 237 + K + P ++ +++DQ + V + V+ +DK+ + E E D D Sbjct: 2649 LKKIEDMPISAVGSDVLATIEDQILQMPVQYQPSVKETLDKLKQAKE---EDDKLAGVYD 2705 Query: 238 DLERINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKEHDDCSVIEPE 297 +LE+I R++D ++ K+ ++ K+ Q+A+ K+++I K D + I+ Sbjct: 2706 ELEKIAKLPARDYDNKLLAKIDEKLNSLPKD--QIAETHRKVEDIKVTKA-DIVAQIDVL 2762 Query: 298 DKNIKFEIIDDNYENDLGE 316 DK + + ID++ N + E Sbjct: 2763 DK-LPAKDIDEHLLNSIEE 2780 >AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical protein Y73E7A.2 protein. Length = 463 Score = 32.7 bits (71), Expect = 1.1 Identities = 28/151 (18%), Positives = 65/151 (43%), Gaps = 10/151 (6%) Query: 164 IDYRLNQRRILMRRDVINKTDVFPAENKKTESQISLDDQSCAVSVAAEVRSIMDKILNSV 223 ID ++ + R N+T + + S+ ++ + +V + +K+L V Sbjct: 285 IDEKMEKFRATTLTKWYNRTKILNTPKSMNNTDFSVFEKGSILGQINKVLADEEKLLKKV 344 Query: 224 EISIEQDTFFTG-ADDLERINPYQGRNHDENYYK-------EVQGKIINMEKNDRQLAKR 275 + G +D E ++P D ++Y+ E + ++ N ++ + + Sbjct: 345 RTNRSGKPRIGGKSDSPESLDPETF--DDSDFYQILLKQMLEARNQMSNNSQDGADMTRS 402 Query: 276 MIKLQNISENKEHDDCSVIEPEDKNIKFEII 306 ++LQ + NK+ D S + +D+ +K+E I Sbjct: 403 YMELQTMFSNKKKRDVSQLSSKDRRLKYEPI 433 >Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein F36F2.3a protein. Length = 1128 Score = 31.9 bits (69), Expect = 1.9 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Query: 187 PAENKKTESQISLDDQSCAVSVAAEVRSIMDKILNSVEISIEQDTFFTGADDLERINPYQ 246 P E + ++ D+ V +SI D + ++E S E + T + + + Sbjct: 675 PDETHEEDADEEPVDEEMDTEVVVRDKSI-DPVYQAMETS-EAEVAETKEESVPVEEDEE 732 Query: 247 GRNHDENYY-----KEVQGKIINMEKNDRQLAKRMIKLQNISENKEH 288 NHDE+ KE Q IN D + +K+M K + +NK+H Sbjct: 733 PENHDEDVEDHKKEKESQSSTINTADEDDESSKKMKKHKKSKKNKKH 779 >Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical protein D2013.5 protein. Length = 934 Score = 31.9 bits (69), Expect = 1.9 Identities = 20/102 (19%), Positives = 45/102 (44%), Gaps = 1/102 (0%) Query: 141 VTALGTLKDCNPIQNDDRAVTFNIDYRLNQRRILMRRDVINKTDVFPAENKKTESQISLD 200 ++A + KD P + D +L + + + + + ENK + ++ L Sbjct: 190 MSAFSSKKD-EPEEKKDNVSAEERIQKLQEEMLKTQSQYQRELERLEKENKVLKQRLLLS 248 Query: 201 DQSCAVSVAAEVRSIMDKILNSVEISIEQDTFFTGADDLERI 242 D A+ + RS++D +++ E D+ + +D+L R+ Sbjct: 249 DDKAAIRLKRLKRSLIDMYSEVLDLLNEYDSSYNTSDNLPRV 290 >U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical protein T04G9.6 protein. Length = 601 Score = 31.5 bits (68), Expect = 2.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 264 NMEKNDRQLAKRMIKLQNISENKEHDDCSVIEPEDKN------IKFEIIDDNYEN 312 N +K +R+LA +++ + E E+DD +E ED N I ++ D+YEN Sbjct: 272 NRQKEERRLAVERREVRIVIEEDEYDDDEEVEYEDSNNVNPPIIAVQLHADSYEN 326 >Z81146-7|CAB03523.2| 517|Caenorhabditis elegans Hypothetical protein K10D11.4 protein. Length = 517 Score = 31.1 bits (67), Expect = 3.3 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 214 SIMDKILNSVEIS--IEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKI 262 +++D+ L SVEI E +F G + +++ Y +N+ N +++QG I Sbjct: 309 NLIDEYLISVEIDKGAELQVYFEGLKETQKVATYTSKNNGTNLPQKLQGSI 359 >Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical protein C38D9.3 protein. Length = 1496 Score = 30.7 bits (66), Expect = 4.3 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%) Query: 475 RIKVTVLDKKTLSDTELSPEKNTKKLPTINIKRTNDFYHIGSNGNIKTVTNWNPHLLVDN 534 R+ T L + S+ ++P+ +K L N+K+++ ++H+ + N+ TN++ + DN Sbjct: 796 RVPPTDLPTEIASNCSINPKVCSKSL---NLKKSHRYHHLNTQVNLNNHTNFDQNCSSDN 852 >Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical protein F13B12.1 protein. Length = 511 Score = 30.7 bits (66), Expect = 4.3 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 262 IINMEKNDRQLAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEIIDDNYENDLGEMKDIN 321 +I+ + +D + KR + L S++ +H+ S EP KN+ + DD+ E+ + D++ Sbjct: 110 LIDSDASDAEGKKRRVMLD--SDDSDHEGTSKKEPTTKNLFGDDSDDDDEDRPKKTNDLD 167 Query: 322 EW 323 E+ Sbjct: 168 EF 169 >U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical protein C34F11.8 protein. Length = 223 Score = 30.7 bits (66), Expect = 4.3 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Query: 731 ESENELDSEPLEISNFKSTKMSDFINDLEIKSQMLE 766 E E E EP + NFK+++ SD+++D EI + LE Sbjct: 57 ELEKERTEEPTDSGNFKASRRSDWVDD-EIDEKDLE 91 >U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical protein F59A6.5 protein. Length = 1286 Score = 30.7 bits (66), Expect = 4.3 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 712 VLCGIIQVPKNFVFEWQVLESENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTT 771 VL + Q+ +F F V ++ +++ E E + + + +NDL+IK++ L E + Sbjct: 238 VLSEVRQLSAHFEFLTPVRKNASKI-RELDEYHQLSAKVIEESMNDLKIKNETLTKELSD 296 Query: 772 MWNATMMKKEEILSSLTDTNLTESLTEKLKVIKSMAED 809 MK EE L L T T SL + + K + E+ Sbjct: 297 KTELVKMKNEE-LEDLRQTT-TASLGDSEQATKYLHEE 332 >L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical protein C14B9.2 protein. Length = 618 Score = 30.7 bits (66), Expect = 4.3 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 247 GRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKEHDDCSVIE--PEDKNIKFE 304 GR D N +E G I M + AK++ KL+++ DD ++I + + FE Sbjct: 231 GRRFDYNGPREAAGIIKYMTDQSKPAAKKLPKLKDVERFMSKDDVTIIGFFATEDSTAFE 290 Query: 305 IIDDNYE 311 D+ E Sbjct: 291 AFSDSAE 297 >Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical protein F23B2.4 protein. Length = 1192 Score = 29.5 bits (63), Expect = 9.9 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 23 HVLVNGSKGGEQKIIDQINEKISIKKTTVAMKKNHRKKGL---LQDSL 67 H LV + K+ Q+++KI I K T + KN R+K L LQD++ Sbjct: 346 HDLVKKMSLYDTKLAVQLSDKIQIYKQTGGVSKNERRKQLKYTLQDTI 393 >Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein C34E11.3 protein. Length = 1577 Score = 29.5 bits (63), Expect = 9.9 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 188 AENKKTESQISLDD--QSCAVSVAAEVRSIMDKILN-SVEISIEQDTFFTGADDLERINP 244 AE +K S+ LD+ SC +VAA ++S K+ EI + ++ ++LE+ Sbjct: 188 AEAEKMHSEKKLDEYMNSCPEAVAASIKSDSAKVKELEYEIRVAKEVSVRLHNELEQTEE 247 Query: 245 YQGRNHDENYYKEVQGKIINMEKNDRQ 271 + + DE +Y + + + I + R+ Sbjct: 248 KRCKLEDEVFYLKEKVREIQTQNKWRE 274 >Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical protein C34E11.3 protein. Length = 1577 Score = 29.5 bits (63), Expect = 9.9 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 188 AENKKTESQISLDD--QSCAVSVAAEVRSIMDKILN-SVEISIEQDTFFTGADDLERINP 244 AE +K S+ LD+ SC +VAA ++S K+ EI + ++ ++LE+ Sbjct: 188 AEAEKMHSEKKLDEYMNSCPEAVAASIKSDSAKVKELEYEIRVAKEVSVRLHNELEQTEE 247 Query: 245 YQGRNHDENYYKEVQGKIINMEKNDRQ 271 + + DE +Y + + + I + R+ Sbjct: 248 KRCKLEDEVFYLKEKVREIQTQNKWRE 274 >Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein C34E11.3 protein. Length = 1577 Score = 29.5 bits (63), Expect = 9.9 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Query: 188 AENKKTESQISLDD--QSCAVSVAAEVRSIMDKILN-SVEISIEQDTFFTGADDLERINP 244 AE +K S+ LD+ SC +VAA ++S K+ EI + ++ ++LE+ Sbjct: 188 AEAEKMHSEKKLDEYMNSCPEAVAASIKSDSAKVKELEYEIRVAKEVSVRLHNELEQTEE 247 Query: 245 YQGRNHDENYYKEVQGKIINMEKNDRQ 271 + + DE +Y + + + I + R+ Sbjct: 248 KRCKLEDEVFYLKEKVREIQTQNKWRE 274 >U97007-4|AAB52297.2| 491|Caenorhabditis elegans Hypothetical protein ZC196.6 protein. Length = 491 Score = 29.5 bits (63), Expect = 9.9 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 19/152 (12%) Query: 178 DVINKTDVFPAENKKTESQISLDDQSCAVSVAAEVRSIMDKILNSVEISIEQDTFFTGAD 237 DV K DV + + E +DD + +EVR + K +V + E + F + Sbjct: 210 DVTAKEDVDSSIELENEDNCQIDDD---IKNTSEVRKEITKFEETVAVPDENEQSFVNSS 266 Query: 238 DLERIN-PYQGRNHDENYYKEV--------QGKIIN--MEKNDRQLAKRM----IKLQNI 282 + N + N D+N +V G + + +N+R L + I+ NI Sbjct: 267 NFVDPNCEKETSNEDQNQQNDVVAEETMEKPGNLTRSFLTENNRLLIEEACLDGIEHSNI 326 Query: 283 -SENKEHDDCSVIEPEDKNIKFEIIDDNYEND 313 +E +E + + ED N K + D+N ND Sbjct: 327 VAEIREDEKTDEVAWEDLNAKEKTDDENQTND 358 >L07143-1|AAB37089.2| 532|Caenorhabditis elegans P granule abnormality protein 2 protein. Length = 532 Score = 29.5 bits (63), Expect = 9.9 Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 9/153 (5%) Query: 654 PENDCEKITEVWIQCSNVLNFGWIKGTRNSENLISLQFPGFYPTSYYQESEVFTKINGVL 713 P++ + I VW++ + + +K + N + + Q P S + K+ + Sbjct: 329 PQSFAKAIKNVWVRHAIIGILDSLKFSLNKD--VFNQLVPLIPGSQVSNDVISGKVENAI 386 Query: 714 CGIIQVPKNFVFEWQVLESENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTMW 773 I + K F E S + ++ P S S ++++ IN +EI +E E T+ Sbjct: 387 SCAIWIVKTFGTEG----SRDSIEKLPWFDS---SVELTELINSIEIAVTSVEVEDQTVN 439 Query: 774 NATMMKKEEILSSLTDTNLTESLTEKLKVIKSM 806 + +K+ + +L TE +EK + S+ Sbjct: 440 FRKIPQKDWLDGNLQKALKTEPTSEKFGISNSL 472 >DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar transport protein protein. Length = 1192 Score = 29.5 bits (63), Expect = 9.9 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 23 HVLVNGSKGGEQKIIDQINEKISIKKTTVAMKKNHRKKGL---LQDSL 67 H LV + K+ Q+++KI I K T + KN R+K L LQD++ Sbjct: 346 HDLVKKMSLYDTKLAVQLSDKIQIYKQTGGVSKNERRKQLKYTLQDTI 393 >AL032623-14|CAA21504.1| 465|Caenorhabditis elegans Hypothetical protein Y43F8B.13 protein. Length = 465 Score = 29.5 bits (63), Expect = 9.9 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Query: 401 ESLGIQTIKTILHLR-KQNKTRGIWITTDKIDNHKLIHNPMSFIP 444 E+ +Q I+TIL+ K + R W T KI N+KL +N ++F+P Sbjct: 419 ENADLQNIETILNFEFKIIEHRNDW--TVKIGNNKLPYNRVAFLP 461 >AB120730-1|BAC87887.1| 532|Caenorhabditis elegans PGL-2 protein. Length = 532 Score = 29.5 bits (63), Expect = 9.9 Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 9/153 (5%) Query: 654 PENDCEKITEVWIQCSNVLNFGWIKGTRNSENLISLQFPGFYPTSYYQESEVFTKINGVL 713 P++ + I VW++ + + +K + N + + Q P S + K+ + Sbjct: 329 PQSFAKAIKNVWVRHAIIGILDSLKFSLNKD--VFNQLVPLIPGSQVSNDVISGKVENAI 386 Query: 714 CGIIQVPKNFVFEWQVLESENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTMW 773 I + K F E S + ++ P S S ++++ IN +EI +E E T+ Sbjct: 387 SCAIWIVKTFGTEG----SRDSIEKLPWFDS---SVELTELINSIEIAVTSVEVEDQTVN 439 Query: 774 NATMMKKEEILSSLTDTNLTESLTEKLKVIKSM 806 + +K+ + +L TE +EK + S+ Sbjct: 440 FRKIPQKDWLDGNLQKALKTEPTSEKFGISNSL 472 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.313 0.132 0.378 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,873,692 Number of Sequences: 27539 Number of extensions: 872025 Number of successful extensions: 1980 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1972 Number of HSP's gapped (non-prelim): 26 length of query: 810 length of database: 12,573,161 effective HSP length: 87 effective length of query: 723 effective length of database: 10,177,268 effective search space: 7358164764 effective search space used: 7358164764 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits) S2: 63 (29.5 bits)
- SilkBase 1999-2023 -