Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000951-TA|BGIBMGA000951-PA|undefined
(810 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50890.1 68414.m05722 expressed protein 32 1.3
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 2.3
At4g33740.2 68417.m04791 expressed protein 31 3.1
At4g33740.1 68417.m04790 expressed protein 31 3.1
At3g19515.1 68416.m02473 expressed protein 31 3.1
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 31 4.0
At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to an... 31 4.0
At2g31130.1 68415.m03801 expressed protein 31 4.0
At1g75270.1 68414.m08744 dehydroascorbate reductase, putative si... 31 4.0
At5g23575.1 68418.m02766 transmembrane protein, putative similar... 30 5.3
At5g11390.1 68418.m01329 expressed protein 30 5.3
At1g19550.1 68414.m02435 dehydroascorbate reductase, putative si... 30 5.3
At1g67170.1 68414.m07641 expressed protein similar to enterophil... 30 7.0
At1g24260.2 68414.m03059 MADS-box protein (AGL9) strongly simila... 29 9.3
At1g24260.1 68414.m03058 MADS-box protein (AGL9) strongly simila... 29 9.3
At1g20750.1 68414.m02599 helicase-related similar to BRCA1-bindi... 29 9.3
At1g19570.1 68414.m02437 dehydroascorbate reductase, putative si... 29 9.3
>At1g50890.1 68414.m05722 expressed protein
Length = 821
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 175 MRRDVINKTDVFPAENKKTESQISLDDQSCAVSVAAEVRSIMDKILNSVEISIEQDTFFT 234
MR +KT + P+ N S S S AVS + + + +IL S+ ++DT+
Sbjct: 1 MRSQTASKTSMKPSSNSSAFSVRS----SVAVSSHSAMVELKQRILTSLSRLGDRDTYQI 56
Query: 235 GADDLERI 242
DDLE+I
Sbjct: 57 AVDDLEKI 64
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 31.5 bits (68), Expect = 2.3
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 742 EISNFKSTKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEILSSLTD-TNLTESLTEKL 800
E ++ K ++ D +N L + L+++ + K EEI L+ TNL E + K+
Sbjct: 861 EEASVKIKRLDDEVNGLRQQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEIINKV 920
Query: 801 KVIKSMAED 809
KV +S+ E+
Sbjct: 921 KVHESILEE 929
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/78 (19%), Positives = 37/78 (47%)
Query: 223 VEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNI 282
VE +++ G ++ E+ + + NH+E K+ + ++ ++ D+ + ++
Sbjct: 88 VEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEEEVAEDDEEDKNKQGEEVAEEDE 147
Query: 283 SENKEHDDCSVIEPEDKN 300
ENK +D + + KN
Sbjct: 148 EENKHEEDEIDEQDQSKN 165
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/78 (19%), Positives = 37/78 (47%)
Query: 223 VEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNI 282
VE +++ G ++ E+ + + NH+E K+ + ++ ++ D+ + ++
Sbjct: 88 VEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEEEVAEDDEEDKNKQGEEVAEEDE 147
Query: 283 SENKEHDDCSVIEPEDKN 300
ENK +D + + KN
Sbjct: 148 EENKHEEDEIDEQDQSKN 165
>At3g19515.1 68416.m02473 expressed protein
Length = 507
Score = 31.1 bits (67), Expect = 3.1
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 468 IDIKKTGRIKVTVLDKKTLSDTELSPEKNTKKLPTINIKRTNDFYHIGSNGNIKTVTNWN 527
IDI + + K +K+T S+ E +PE N K P N K ++ G K + N
Sbjct: 371 IDIDENEKEKEREREKETESEEE-NPEDNQKGNPEHNPKEKSEEMQYPDFGASKFHNSLN 429
Query: 528 PHLLVDNNK 536
H++ D++K
Sbjct: 430 EHIMPDSDK 438
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 30.7 bits (66), Expect = 4.0
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 182 KTDVFPAENKKTESQISLDDQSCAVSVAAEVRSIMDKILN-SVEISIEQDTFFTGADDL- 239
+TD E + E QI Q+ S+ EV+++ DK+ + S E++ E D L
Sbjct: 266 QTDKTQGEISELEKQIKALTQAREASMGGEVKALSDKVDSLSNEVTRELSKLTNMEDTLQ 325
Query: 240 -ERINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKE 287
E N + ++ E+ K V+ + + K D A+ K Q S E
Sbjct: 326 GEEKNAEKMVHNIEDLKKSVEERASALNKCDEGAAELKQKFQEFSTTLE 374
>At2g38760.1 68415.m04759 annexin 3 (ANN3) nearly identical to
annexin (AnnAt3) [Arabidopsis thaliana] GI:6503082;
contains Pfam profile PF00191: Annexin
Length = 321
Score = 30.7 bits (66), Expect = 4.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 78 KKKYLDDSHQKYNVGNTELVNLPKLGLSVSPAYGVTLDSNV 118
+KK LD H Y +G + L + ++ YGVT+D +V
Sbjct: 185 EKKQLDHDHVLYILGTRSIYQLRETFVAYKKNYGVTIDKDV 225
>At2g31130.1 68415.m03801 expressed protein
Length = 419
Score = 30.7 bits (66), Expect = 4.0
Identities = 27/141 (19%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 151 NPIQNDDRAVTFNIDYRLNQRRILMRRDVINKTDV---FPAENKKTESQISLDDQSCAVS 207
N ++++D V + ++ L+ + + +D+ + + PAE+ + +++ S +VS
Sbjct: 259 NSVKSNDSEVIVDNEHGLSADKSVRSQDLEIQPSLATSLPAESDDCRKETNVETSSSSVS 318
Query: 208 VAAEVRSIMDKILNSVEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKIINMEK 267
E +S + + L+ S+E+ D+ + P + N YK+++ I + K
Sbjct: 319 ---EPKSEILQHLSGR--SVEESCILVDRDEFHSVFPDKMENDKHKPYKKIRDAISSRMK 373
Query: 268 NDRQLAKRMIKLQNISENKEH 288
+R+ + + Q +E+ E+
Sbjct: 374 QNREKEYKRLARQWYAEDVEN 394
>At1g75270.1 68414.m08744 dehydroascorbate reductase, putative
similar to GI:6939839 from [Oryza sativa]
Length = 213
Score = 30.7 bits (66), Expect = 4.0
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 454 LPLQNYSSSHSTEP---IDIKKTGRIKVTVLDKKTLSDTELSPEKNTKKLPTINIKRTND 510
LP + + + S +P +DI G++ V LD K ++D+++ +K P ++K +
Sbjct: 35 LPYKTHLINVSDKPQWFLDISPEGKVPVVKLDGKWVADSDVIVGLLEEKYPEPSLKTPPE 94
Query: 511 FYHIGS 516
F +GS
Sbjct: 95 FASVGS 100
>At5g23575.1 68418.m02766 transmembrane protein, putative similar to
cleft lip and palate transmembrane protein 1 [Homo
sapiens] GI:4039014; contains Pfam profile PF05602:
Cleft lip and palate transmembrane protein 1 (CLPTM1)
Length = 593
Score = 30.3 bits (65), Expect = 5.3
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 437 HNPMSFIPNLKDGCSEMLPLQNYSSSHSTEPIDIKKTGRIKVTVLDKKTLSDTELSPEKN 496
H ++ P K + L L + S +EP +++K G DKK+ E+ E
Sbjct: 162 HAVATYFPKQKKNKKKSL-LGSPKDSDESEP-EVEKVG-------DKKSDPKEEVPVEWI 212
Query: 497 TKKLPTINIKRTNDFYHIGSNGNIKTVTNWNPHLLVD 533
+ P + I +DF H NG N PHLLV+
Sbjct: 213 SLWKPNVTINLVDDFTHYSQNG---VPPNIAPHLLVE 246
>At5g11390.1 68418.m01329 expressed protein
Length = 703
Score = 30.3 bits (65), Expect = 5.3
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 189 ENKKTESQISLDDQSCAVSVAAEVRSIMDKILNSVEISIEQDTFFTGADDLER---INPY 245
E + E ++DD + A E ++ ILNS +E F + I+P+
Sbjct: 91 EEDEEEPSSNVDDDDDSAEKALEF-DLLSSILNSEVKELESLLGFLQNEIQSARVMISPF 149
Query: 246 QGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISEN 285
Q HD + +++GK+ + E++ QL +++++++ S N
Sbjct: 150 Q---HDGEAFLDLEGKLNDTEQSLGQLMEQVVEMKKQSSN 186
>At1g19550.1 68414.m02435 dehydroascorbate reductase, putative
similar to dehydroascorbate reductase [Arabidopsis
thaliana] gi|10952514|gb|AAG24946
Length = 153
Score = 30.3 bits (65), Expect = 5.3
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 453 MLPLQNYSSSHSTEPIDIKKTGRIKVTVLDKKTLSDTELSPEKNTKKLPTINIKRTNDFY 512
ML +Q SS DI G++ V +D K ++D++ + +K P +K +F
Sbjct: 1 MLVVQICSSPSHEMFWDISPQGKVPVLKIDDKWVTDSDATVGILEEKYPDPPLKTPAEFA 60
Query: 513 HIGSN 517
+GSN
Sbjct: 61 SVGSN 65
>At1g67170.1 68414.m07641 expressed protein similar to
enterophilin-2L (GI:12718845) [Cavia porcellus]; similar
to Hyaluronan mediated motility receptor (Intracellular
hyaluronic acid binding protein) (Receptor for
hyaluronan-mediated motility) (CD168 antigen)
(Swiss-Prot:O75330) [Homo sapiens]
Length = 359
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 249 NHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEIIDD 308
++++ +Y + + MEKN +A+ + KLQ N + D P NI EI
Sbjct: 199 DYEKKFYNDHLESLQAMEKNYMTMAREVEKLQAQLMNNANSDRRAGGPYGNNINAEIDAS 258
Query: 309 NYENDLGEMKD 319
+++ G +D
Sbjct: 259 GHQSGNGYYED 269
>At1g24260.2 68414.m03059 MADS-box protein (AGL9) strongly similar
to GB:O22456, MADS-box protein, Location of EST
gb|H37053
Length = 251
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 730 LES-ENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTM 772
LES E +LDS +I ++ M D +NDL+ K +ML T+
Sbjct: 128 LESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTL 171
>At1g24260.1 68414.m03058 MADS-box protein (AGL9) strongly similar
to GB:O22456, MADS-box protein, Location of EST
gb|H37053
Length = 250
Score = 29.5 bits (63), Expect = 9.3
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 730 LES-ENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTM 772
LES E +LDS +I ++ M D +NDL+ K +ML T+
Sbjct: 127 LESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTL 170
>At1g20750.1 68414.m02599 helicase-related similar to BRCA1-binding
helicase-like protein BACH1 (GI:13661819) Homo
sapiens].;
Length = 1179
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 205 AVSVAAEVRSIMDKILNSVEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKIIN 264
A+ + E ++ D + I++E+D F ++LE+++ + +D + Y+ V+G I
Sbjct: 264 AIIIFDEAHNMEDIAREAGSINLEEDIIFKLKNELEQMSEVEPEIYD-SLYEVVEGLISW 322
Query: 265 MEKNDRQLAKR 275
+ + LAKR
Sbjct: 323 IGRKKDSLAKR 333
>At1g19570.1 68414.m02437 dehydroascorbate reductase, putative
similar to GB:BAA90672 from (Oryza sativa)
Length = 213
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 468 IDIKKTGRIKVTVLDKKTLSDTELSPEKNTKKLPTINIKRTNDFYHIGSN 517
+DI G++ V +D K ++D+++ +K P +K +F +GSN
Sbjct: 52 LDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLKTPAEFASVGSN 101
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,704,259
Number of Sequences: 28952
Number of extensions: 803115
Number of successful extensions: 1758
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1751
Number of HSP's gapped (non-prelim): 17
length of query: 810
length of database: 12,070,560
effective HSP length: 87
effective length of query: 723
effective length of database: 9,551,736
effective search space: 6905905128
effective search space used: 6905905128
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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