Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000951-TA|BGIBMGA000951-PA|undefined
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 37 0.013
SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomy... 31 0.64
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 31 0.64
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 30 1.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 1.5
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 29 1.9
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 29 2.6
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 29 3.4
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 4.5
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 28 4.5
SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces... 28 4.5
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 28 5.9
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 28 5.9
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 28 5.9
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos... 27 7.8
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 27 7.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 36.7 bits (81), Expect = 0.013
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 146 TLKDCNPIQNDDRAVTFNIDYRLNQRRILMRRDVINKTDVFPAENKKTESQISLDDQSCA 205
TLK+ ++ + A+ F+ N R ++ ++ K + A+ S +S + A
Sbjct: 693 TLKE--DLRKSEEALRFSKLEAKNLREVI--DNLKGKHETLEAQRNDLHSSLSDAKNTNA 748
Query: 206 VSVAAEVRSIMD-KILNSVEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKIIN 264
+ + +S D K L + ++ QD+ +N YQ + N Y E++ +N
Sbjct: 749 ILSSELTKSSEDVKRLTANVETLTQDSKAMKQSFTSLVNSYQSIS---NLYHELRDDHVN 805
Query: 265 MEKNDRQLAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEIIDDNYENDLGEMKDINEWF 324
M+ + L + KL+ EN + ++I+ K + + N E+ + E+K++N
Sbjct: 806 MQSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHV---NQESKVSELKEVNGKL 862
Query: 325 MMTVEN 330
+ ++N
Sbjct: 863 SLDLKN 868
>SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 31.1 bits (67), Expect = 0.64
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 236 ADDLERINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRM------IKLQNISEN-KEH 288
AD ++ N +G DE +++G I +E++ + KR + L+NI E K
Sbjct: 55 ADTADQENESEGS--DEVELSDLEG--IELEEDADLIRKRKLAINNTVALENIYERIKYP 110
Query: 289 DDCSVIEPEDKNIKFEIIDDNYENDLGEMKDINEWFMMTVENDFSEIRFNN 339
DD S +E + K II +N E+DL + + +V+ F+++R N
Sbjct: 111 DDISFVENQAVTTKEPIIIENVEDDLARELAFYKQGVSSVKAAFAKLREAN 161
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 31.1 bits (67), Expect = 0.64
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 207 SVAAEVRSIMDKILNSVEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKIINME 266
S+ + + D L VE + D DDL ++N N EN+ K Q E
Sbjct: 580 SIDVDKLPLQDVGLQYVEDESDSDETDAAKDDLFKVNESIETNGHENFQK--QALTSTGE 637
Query: 267 KNDRQLAKRMIKLQNISENKEHDDCSVIE 295
++ KL NIS + D+ +IE
Sbjct: 638 QSSSNSRANPSKLFNISSDDSEDEVPIIE 666
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 217 DKILNSVEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKII 263
+K +N+ E S++Q T T D + ++ R H E YY+E Q KI+
Sbjct: 1554 EKAINN-ENSVKQKTVITRKDVVSKVLALF-RPHRETYYRETQNKIL 1598
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/82 (21%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 729 VLESENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEILSS-- 786
++ + ELD IS++K+ + + ++ + ++ EG+ + +KK E +S
Sbjct: 987 IVTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLSESLKRVKKLERENSTL 1046
Query: 787 LTDTNLTESLTEKLKVIKSMAE 808
++D ++ + E+L V+K + E
Sbjct: 1047 ISDVSILKQQKEELSVLKGVQE 1068
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 29.5 bits (63), Expect = 1.9
Identities = 54/293 (18%), Positives = 114/293 (38%), Gaps = 15/293 (5%)
Query: 30 KGGEQKIIDQINEKISIKKTTVAMKKNHRKKGLLQDSLIVKFKPGPLQKKK-----YLDD 84
+G E K +D + E S++ T+A++KN LL + V+F+ L ++K ++D
Sbjct: 750 RGRESKNVDYLKE--SVRYATLALEKNPENPSLLFNVAFVQFQLCELIRQKPENSRTVED 807
Query: 85 SHQKYNVGNTELVNLPKLGLSVSPAYGVT-LDSNVTNFLNNLRDKDGTLTQNWAEFAVTA 143
+ + + KL P Y T ++ N + + Q E+ +
Sbjct: 808 LNFAMQQLDASIETFTKLVSVEHPPYSPTSIEQRAKMAKNTTKRQLERAIQAQIEYEKSV 867
Query: 144 LGTLKDCNPIQNDDRAVTFNIDYRL---NQRRILMRRDVINKTDVFPAENKKTESQISLD 200
L+D + ++A + L Q R ++ K E +K++ + S D
Sbjct: 868 AAKLEDARIQREKEKARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRKSQQKASED 927
Query: 201 DQSCAVSVAAEVRSIMDKILNSVEISIEQDTFFTGADDLERINPYQGRNHDENYYKEVQG 260
D S + + K + +Q++ +G + + I RN + + V
Sbjct: 928 DMSLSDDEEKQSGKKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSDARNKTKK--RRVNR 985
Query: 261 KIINMEKN-DRQLAKRMIKLQNISEN-KEHDDCSVIEPEDKNIKFEIIDDNYE 311
++I+ E D+ + + +S +E D + + +D N + + + E
Sbjct: 986 RVISEEYTFDQDSDAEGNQEEEVSRTIEEKQDNDITDNQDDNKELNLFSEEDE 1038
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 716 IIQVPKNFVFEWQVLESENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTMWNA 775
II P NF+ + + E EL+S +S++ S + + + D E + ++L+ G
Sbjct: 979 IISTP-NFLTHFALAYQEYELESNIDNLSSYISDQNLELLPDYEQRIKVLQELGYIDAER 1037
Query: 776 TMMKKEEILSSLTDTN---LTESLTE 798
T++ K + + T+ LTE + E
Sbjct: 1038 TVLLKGRVACEINSTSELVLTELILE 1063
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 722 NFVFEWQVLESENELDSEPLEISNF------KSTKMSDFINDLEIKSQMLENEGTTMWNA 775
N +E ++ E+ +L+++ IS++ K K+S L K+ +LE + +
Sbjct: 366 NANYETEMKEARQKLNNKEALISHYDDDFRAKELKISRLSESLREKAGLLEFQSSVSEQR 425
Query: 776 TMMKKEEILSSLTDT----NLTESLTEKLKVIKSMAEDE 810
++ +E+I SS+ D E L E+L +K+ E E
Sbjct: 426 DLLYQEQIQSSIKDMENVFRKNEYLMEELNELKNNLEVE 464
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.3 bits (60), Expect = 4.5
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 189 ENKKTESQISLD-------DQSCAVSVAAEVRSIMDKILNSVEISIEQDTFFTGADDLER 241
EN K + Q+S D D A E+RSI + + + ++ + F A++L
Sbjct: 685 ENSKYQQQLSTDRLTNANNDVEAFKKEAKELRSINQNLQDIISRQDQRASKF--AEELLH 742
Query: 242 INPYQGR--------NHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKEHDDCSV 293
+N R +++ K Q ++I+ +ND+ LA+R + +S+ + +
Sbjct: 743 VNSLAERLKGELNASKGEKDLRKRTQERLIS--ENDKLLAERERLMSLVSDLQTFLNQQQ 800
Query: 294 IEPEDKNIKFEIIDDNYENDLGEMKDINE 322
+ + +KFE ++ L ++K+ NE
Sbjct: 801 LSDAARKVKFESEKESLSLSLQKLKESNE 829
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 737 DSEPLEISNFKS--TKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEILSSLTDTNLTE 794
D E LE +NF +K +D ++D + ++Q+L EG N+++ E+ S++D NLT+
Sbjct: 696 DYEDLEDANFDEEWSKAADLMSD-DPENQVLY-EGNL--NSSLSLNED--PSVSDENLTQ 749
Query: 795 SLTEKL 800
+T KL
Sbjct: 750 KVTSKL 755
>SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 429 KIDNHKLIHNPMSFIPNLKDGCSEMLPLQNYSSSHSTEPIDIKKTGRIKVTVLDKKTLSD 488
+IDNH ++ N + DG EM+ N+ S I + G +T ++ +T
Sbjct: 18 EIDNHGIVGNMHTSAMISLDGSVEMMCWPNFDSPSIFARILDARAGHFSITPIE-QTSCK 76
Query: 489 TELSPEKN---TKKLPTINIKRTNDFYH 513
P N TK + R DF+H
Sbjct: 77 QMYEPSTNILHTKFYSERGVLRLLDFFH 104
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 227 IEQDTFFTGADDLERINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENK 286
+++ T FT + + + Q + + +GK K +++ + K +S+ +
Sbjct: 493 LKRQTIFTQGPNSTKESK-QAVKEETSVKNSPKGKNTKNGKAEKEKPGKKSKAPKLSKAE 551
Query: 287 E-HDDCSVIEPEDKNIKFEIIDDNYENDLGEMKDIN 321
+ + + + E + K E+I + +NDLG +KD+N
Sbjct: 552 QIRAEIAARKVEKEENKNEVIWNETKNDLGRIKDLN 587
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 742 EISNFKSTKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEI-LSSLTDTNLTESLTEKL 800
E + K K S ++DL + SQ+L E TT+ + + E+ + ++ ++ E+ +
Sbjct: 272 ENAELKDIKQSSELSDLSLSSQILYPESTTLSEISPIYDSELAIENILESKCFENEQAII 331
Query: 801 KVIKSMAE 808
+ +K E
Sbjct: 332 EGVKDFTE 339
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 253 NYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEIIDDNYEN 312
N + ++ K + K+D++ ++R + N+++ + + PE + +F+ I NY
Sbjct: 1121 NKHANLKQKKTHSSKSDKKSSRRRKNEKRRKLNEQNPNIRNV-PERSSSRFQGIRINYSE 1179
Query: 313 DLGEMKDINEWFMMTVENDFSEI 335
++I+E E DF EI
Sbjct: 1180 APSSSEEISEEEEEISEEDFDEI 1202
>SPCC1235.12c |mug146||meiotically upregulated gene
Mug46|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 400 NESLGIQTIKTILHLRKQNKTRGIWITTDKIDNHKLI 436
+ SL QT T L + QNK + W + D +DN K++
Sbjct: 175 SNSLYKQTDLTSLCMFNQNKIQTDWSSIDPMDNDKIV 211
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 27.5 bits (58), Expect = 7.8
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 16/148 (10%)
Query: 218 KILNSVEISIEQDTF----FTGADDLERINPYQGRNHDENYYKEVQGKIINMEKNDRQLA 273
K LN+VE +++T F D+ R N D +++ + D Q +
Sbjct: 189 KALNAVEKQFQEETLQKQRFEREDESSRQKLSAAMNEDIPPWRQPSKNSQTLSNGDLQHS 248
Query: 274 KRMIKLQNISENKEHDDCSVIEPEDKNIK---FEIIDDNY-ENDLGEMKDINEWFMMTVE 329
K +QN+ + S + KNI + +IDD + D DI F +
Sbjct: 249 K----VQNVDQKSGFLTSSETDVP-KNINDYIYLLIDDRFVPPDRVYYTDIKHHFRKFL- 302
Query: 330 NDFSEIRFNNGGFFVTYDKIVKAINVAR 357
+ +I N GF++T++ +A N R
Sbjct: 303 --YEKIYMNKDGFYITFNNYREASNCYR 328
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,767,897
Number of Sequences: 5004
Number of extensions: 166886
Number of successful extensions: 445
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 438
Number of HSP's gapped (non-prelim): 24
length of query: 810
length of database: 2,362,478
effective HSP length: 79
effective length of query: 731
effective length of database: 1,967,162
effective search space: 1437995422
effective search space used: 1437995422
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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