Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000951-TA|BGIBMGA000951-PA|undefined
(810 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0269 - 16366392-16366403,16366469-16368262 33 0.69
07_01_0184 - 1304328-1304951,1305328-1305441,1305549-1305839,130... 33 0.69
08_02_0246 + 14745367-14745372,14745452-14746106,14746299-147472... 33 0.91
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411... 33 0.91
02_02_0373 - 9534016-9534226,9534251-9534297,9534453-9534500,953... 33 1.2
01_01_0074 - 561304-562131,562219-562425,563034-563084,563310-56... 33 1.2
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 32 1.6
03_06_0109 - 31717691-31718311,31719110-31719223,31719316-317196... 31 3.7
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 30 6.4
04_04_1489 - 33938426-33939363,33939429-33939813 30 6.4
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 30 8.5
02_01_0773 - 5760034-5760386,5760889-5760925,5761069-5761225,576... 30 8.5
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 30 8.5
>10_08_0269 - 16366392-16366403,16366469-16368262
Length = 601
Score = 33.5 bits (73), Expect = 0.69
Identities = 17/81 (20%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 272 LAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEIIDDNYENDLGEMKDINEWFMMTVEND 331
+AK K+ ++S+++ DDC + E+ FE + E ++ + K +N+ + +++
Sbjct: 374 MAKGSSKVTSLSDSESDDDCDDVSYEELVSMFEELHAYSEKEIVKFKALNKDY-ASLDVL 432
Query: 332 FSEIRFNNGGFFVTYDKIVKA 352
+ E++ +N ++++K+ +A
Sbjct: 433 YEELKTSNERLTISHEKLKEA 453
>07_01_0184 -
1304328-1304951,1305328-1305441,1305549-1305839,
1305930-1306238,1306326-1307048
Length = 686
Score = 33.5 bits (73), Expect = 0.69
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 691 FPGFYPTSYYQESEVFTKINGVLCGIIQVPKNFVFEWQVLE-----SENELDS-EPLEIS 744
FP P ++ + TK N ++ G+ Q+ +EW V + SE +L + P E+
Sbjct: 547 FPFIIPYLLFENTMSVTKFNAMISGLFQL--GSAYEWVVTKKSGRSSEGDLIALAPKELK 604
Query: 745 NFKSTKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEILSSLTDTNLTESLTEK 799
K ++ +K NE +N + KKE LS L T SL K
Sbjct: 605 QQKILDLTAIKEQSMLKQSSPRNEAKKKYN-RIYKKELALSLLLLTAAARSLLSK 658
>08_02_0246 +
14745367-14745372,14745452-14746106,14746299-14747269,
14748123-14749168,14750669-14751473
Length = 1160
Score = 33.1 bits (72), Expect = 0.91
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 303 FEIIDDNYENDLGEMKDINEWFMMTVENDFSEIRFNNGG--FFVTYDKIVKAINVARISG 360
F + D + LG + NE ++ ++++ +RF GG F V+ ++ + V +
Sbjct: 856 FAQLPDLLKEILGSVLKDNEGALLNLDHEQPALRFFVGGYVFAVSVHRVQLLLQVLNVKR 915
Query: 361 KAVRLSSQKCAPKNSGPQYGLYAIPDSNEYCVFIG---AYEPNESLGIQTIKTILHL 414
+ Q+ P+N+G + +P+ +E C + A EP ++ + + T+L L
Sbjct: 916 FHHQQQQQQQTPQNNGQEE--LTVPEISEICDYFSRRVASEPYDASRVASFITLLTL 970
>02_01_0558 +
4109929-4110042,4110989-4111097,4111404-4111563,
4111721-4111796,4111984-4112109,4112233-4112484
Length = 278
Score = 33.1 bits (72), Expect = 0.91
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 731 ESENELDSEPLE--ISNFKSTKMSD-----FINDLEIKSQMLENEGTTMWNATMMKKEEI 783
+S N LD + + +SN +S + S + DLE + L E +++ ++
Sbjct: 116 QSTNPLDVKRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRGENASLFKQLTDANQQF 175
Query: 784 LSSLTDTNLTESLTEKLKVIKSMAED 809
+S+TD + +S E L+V MAED
Sbjct: 176 TTSVTDNRILKSDVEALRVKVKMAED 201
>02_02_0373 -
9534016-9534226,9534251-9534297,9534453-9534500,
9534772-9534972,9535090-9535215,9535386-9535461,
9535617-9535776,9536074-9536182,9537225-9537398
Length = 383
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 731 ESENELDSEPLE--ISNFKSTKMSD-----FINDLEIKSQMLENEGTTMWNATMMKKEEI 783
+S N LD + + +SN +S + S + DLE + L E +++ ++
Sbjct: 136 QSTNPLDVKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLTDANQQF 195
Query: 784 LSSLTDTNLTESLTEKLKVIKSMAED 809
+++TD + +S E L+V MAED
Sbjct: 196 TTAVTDNRILKSDVEALRVKVKMAED 221
>01_01_0074 -
561304-562131,562219-562425,563034-563084,563310-563408,
564476-564622,564750-564851,565713-565928,566061-566192,
566249-566310,567618-567746,568426-568567,568735-568830,
568924-569000,569070-569148,569229-569297,569589-569703,
570614-570777,570847-571002
Length = 956
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 726 EWQVLESE-NELDSEPLEIS-NFKSTKMSDFINDLEIKSQMLENEGTTMWNAT 776
+W ++ ELD+ E+S N S K+++ ND+ +K E++ T WN T
Sbjct: 262 QWMAIDLYIRELDTLSFELSINRCSEKLANLANDILLKESASEDQKTNTWNQT 314
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 32.3 bits (70), Expect = 1.6
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 27/202 (13%)
Query: 181 NKTDVFPAENKKTESQISLDDQSCAVSVAA-EVRSIMDKILNSVEISIEQDTFFTGADDL 239
N E K+E + DD+ V E I ++I E+ ++D +++
Sbjct: 415 NAASANSVEPDKSEECLEFDDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDV----VEEV 470
Query: 240 ERINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKEHDDCSVIEPEDK 299
E ++ + DE E +G ++ K Q ++++E +H + + P
Sbjct: 471 EEVDEEEDEEEDEES-DETEG--VSKTKGVHQ--------KDVTEKGKHAELLALPPHGS 519
Query: 300 NIKFE-IIDDNYENDLGEM----KDINEWFMMTVEND---FSEIRFNNGGFFVTYDKIVK 351
+ I D DL + ++ E MM ++D ++ + F G + K+VK
Sbjct: 520 EVYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDDSRGYAFVNFRTKGLAL---KVVK 576
Query: 352 AINVARISGKAVRLSSQKCAPK 373
+N A++ GK +R+SS + K
Sbjct: 577 ELNNAKLKGKRIRVSSSQAKNK 598
>03_06_0109 -
31717691-31718311,31719110-31719223,31719316-31719606,
31719698-31720006,31720098-31720865
Length = 700
Score = 31.1 bits (67), Expect = 3.7
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 691 FPGFYPTSYYQESEVFTKINGVLCGIIQVPKNFVFEWQVLE-----SENELDS-EPLEIS 744
FP P ++ + TK N ++ G+ Q+ +EW V + SE +L S P E+
Sbjct: 562 FPFIIPYLLFENTMSVTKFNAMISGLFQLGN--AYEWVVTKKSGRSSEGDLISLAPKELK 619
Query: 745 NFKSTKMSDFINDLEIKSQMLENEGTTMWNATMMKKEEILSSLTDTNLTESLTEK 799
+ K+ + D K Q + + + KKE LS L T SL K
Sbjct: 620 HQKTESAPNL--DAIAKEQSAPRKDVKKKHNRIYKKELALSLLLLTAAARSLLSK 672
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 30.3 bits (65), Expect = 6.4
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 721 KNFVFEWQVLESENELDSEPLEISNFKSTKMSDFINDLEIKSQMLENEGTTMWN-ATMMK 779
KN E QV + L E + + ++ ++D+ KSQ LE+E + + N T +K
Sbjct: 239 KNASLEVQVSRLDEAL-KECVRQLHLAQEDQAEKVHDVVTKSQELESENSKLQNRITELK 297
Query: 780 KEEILSSLTDTNLT--ESLTEKLKVIK 804
K+ + L +N++ L EK + IK
Sbjct: 298 KQLETTKLEASNMSIDHDLQEKFQAIK 324
>04_04_1489 - 33938426-33939363,33939429-33939813
Length = 440
Score = 30.3 bits (65), Expect = 6.4
Identities = 17/81 (20%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 272 LAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEIIDDNYENDLGEMKDINEWFMMTVEND 331
+AK K+ ++S+N+ DDC + ++ FE + E ++ + K + + ++E
Sbjct: 286 MAKGSSKVTSLSDNESDDDCDDVSYDELVSMFEELHAYSEKEIVKFKALKK-DHASLEVL 344
Query: 332 FSEIRFNNGGFFVTYDKIVKA 352
+ E++ +N + ++K+ +A
Sbjct: 345 YEELKTSNERLTIFHEKLKEA 365
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 29.9 bits (64), Expect = 8.5
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 2 LSTINPDGHKNPKQYVLLDNKHVLVNGSKGGEQKIIDQINEKISIKKTTVAMKKNHRKK 60
L INP + P ++ N ++LV + + KI+ ++EK + + +KK +K
Sbjct: 460 LPQINPGFNNTPFKFTKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKEQEEK 518
>02_01_0773 -
5760034-5760386,5760889-5760925,5761069-5761225,
5762584-5762773,5762873-5763154,5763582-5763645
Length = 360
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 241 RINPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQN 281
R++ Q R + Y +++ K+ ++EK + +L +R LQN
Sbjct: 184 RVSAQQARERKKAYLNDLEVKVKDLEKKNSELEERFSTLQN 224
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/63 (22%), Positives = 36/63 (57%)
Query: 252 ENYYKEVQGKIINMEKNDRQLAKRMIKLQNISENKEHDDCSVIEPEDKNIKFEIIDDNYE 311
E+ K + +++ EKN ++ +K+ ++ ++ E+D ++E + K IK E D + +
Sbjct: 1629 ESLVKNLSLELLESEKNVMLEYEKEMKVGHVGQSDENDVGLLVEEDAKKIKLEEADSDIK 1688
Query: 312 NDL 314
+++
Sbjct: 1689 SNV 1691
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.132 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,189,101
Number of Sequences: 37544
Number of extensions: 845557
Number of successful extensions: 1481
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1471
Number of HSP's gapped (non-prelim): 18
length of query: 810
length of database: 14,793,348
effective HSP length: 88
effective length of query: 722
effective length of database: 11,489,476
effective search space: 8295401672
effective search space used: 8295401672
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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