GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000951-TA|BGIBMGA000951-PA|undefined
         (810 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal glutath...    25   6.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   6.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   6.0  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            25   7.9  

>AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal
           glutathione transferase GSTMIC2protein.
          Length = 152

 Score = 25.4 bits (53), Expect = 6.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 379 YGLYAIPDSNEYCVFIGAYEPNESLGIQTI 408
           Y +  IP    +  F+GA  P   + +QTI
Sbjct: 118 YAVVVIPQPARFLAFVGAMMPTAYMTLQTI 147


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 6.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 243  NPYQGRNHDENYYKEVQGKIINMEKNDRQLAKRMIKLQNISE 284
            +P Q +   ++  KE+Q K+  +EK      K M KL  ++E
Sbjct: 995  DPDQIKKSGDSLAKELQSKLDTLEKIQTPNMKAMQKLDRVTE 1036


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.4 bits (53), Expect = 6.0
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 775 ATMMKKEEILSSLTDTNLTESLTEKLKVIKSMAE 808
           A M+K +E L  LTD N+TE L   L+ + ++A+
Sbjct: 341 AEMVKPKE-LRDLTDANITEVLDIHLQRLSALAK 373


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.0 bits (52), Expect = 7.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 99  LPKLGLSVSPAYGVTLDSNVTNFLNNLRDKDGT 131
           + K G  V+P   +    + TN  NNL   +GT
Sbjct: 87  IAKTGTGVTPTSSIASSGDDTNSSNNLTTSNGT 119


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.132    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,737
Number of Sequences: 2123
Number of extensions: 30947
Number of successful extensions: 46
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 4
length of query: 810
length of database: 516,269
effective HSP length: 70
effective length of query: 740
effective length of database: 367,659
effective search space: 272067660
effective search space used: 272067660
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)