Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000950-TA|BGIBMGA000950-PA|undefined
         (1347 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   4.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   6.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    24   6.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    24   6.1  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 17/61 (27%), Positives = 26/61 (42%)

Query: 147 FYTKFIKIKTKLYYKQRKFNLFREESEGYSKLIVELNQEINEDTEWKNLLEIIQSLIGCF 206
           F  K+  I   L  + +    F ++ EG    I ELN   NE   W  ++ I+ S +   
Sbjct: 169 FRGKYRNINLLLTEQLQNRRFFAKKMEGLVCSIKELNMIFNEFFGWPIIMIILYSSLMVL 228

Query: 207 N 207
           N
Sbjct: 229 N 229


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
            protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 1298 EQKGAIKMSGHQNGSQEDHHYDKFKREKSPFR 1329
            EQ G      HQ+GS   HH+++     + +R
Sbjct: 6    EQSGFYGSHHHQSGSVAGHHHEQSAAAAAAYR 37


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 854 SSIQPMLPARVLEDISPEFYVTFWS 878
           + + P L A  LE+IS + +V FW+
Sbjct: 433 TKLSPELKAGSLEEISVKRFVKFWT 457


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 854 SSIQPMLPARVLEDISPEFYVTFWS 878
           + + P L A  LE+IS + +V FW+
Sbjct: 435 TKLSPELKAGSLEEISVKRFVKFWT 459


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,867
Number of Sequences: 317
Number of extensions: 11336
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 4
length of query: 1347
length of database: 114,650
effective HSP length: 65
effective length of query: 1282
effective length of database: 94,045
effective search space: 120565690
effective search space used: 120565690
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)