Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000950-TA|BGIBMGA000950-PA|undefined
(1347 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 364 e-101
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 37 0.022
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 35 0.089
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 33 0.27
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 32 0.47
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 31 0.83
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 31 1.1
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 29 3.3
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 3.3
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 3.3
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 29 3.3
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 4.4
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 4.4
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 4.4
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 29 4.4
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 29 5.8
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 29 5.8
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 29 5.8
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 29 5.8
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 28 7.7
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 28 7.7
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 28 7.7
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 28 7.7
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 28 7.7
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 28 7.7
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 28 7.7
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 364 bits (896), Expect = e-101
Identities = 230/783 (29%), Positives = 390/783 (49%), Gaps = 39/783 (4%)
Query: 419 PNCKTFEDMKETVIPALILLGPALHHDPVLMYKVIRILRTARGQKDDPLHFEALTVLDTA 478
P + + IP L L G AL HDPV++ K+ RI + + L ++ +
Sbjct: 527 PILRNLTEFYNIAIPWLRLSGLALCHDPVIVTKLCRIGQKCVDNSSESRTLW-LDIIRSL 585
Query: 479 ILPALTLMEGNCCMAEEVYTLLKLYPYQCRYCLYARWKNEAGERIPALIRVRGNSLQKIK 538
+LP +TL++ N ++ E++ LL + RY LY W + + ++ P L + ++ K
Sbjct: 586 LLPLITLIDVNTGLSYELFELLSKFDSSTRYALYGEWSSTSMKKFPELKLQNSITEKETK 645
Query: 539 HIMKRVSKENIKPQGRLIGKLSHAAPAFLFDYVLLQIQTYDNLIGPVVESMKYLTSLSLD 598
I++R++K N+K GRL+ K+ H+ P +F L QI+TYDNL+ VV+S +++T+L D
Sbjct: 646 GILRRLTKTNVKQFGRLLAKVCHSNPCTVFSIALNQIETYDNLVEVVVDSARFITALDFD 705
Query: 599 VLGYCLVEA--------LGSRRSTPPAWLQALASFAGAAFKKH-NIELTALLQFVANRLK 649
L + ++ + L S ++ WLQ LASF G F+++ +++ T+++++V + K
Sbjct: 706 ALTFIILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSIVEYVIKQFK 765
Query: 650 AQQSQDLIVLKEIVQKMAGIEAAEEMTPEQLEAMAGGELLK--GEAGYFSQVRNTRRSSA 707
Q DL++LKE++ +M G++ ++ Q++ AGG +L+ + + R+SS
Sbjct: 766 VNQMFDLVILKELLSQMTGLQPWTNLSDNQIQGAAGGPVLRQLSLSLIYENPDVVRKSSM 825
Query: 708 RLKDAIVGNNLDISLCILAAQQRHCCVWKEYEDDIQISGEPPGSQLKVVGRLADQCQDAL 767
RL + + N L L +L +Q+ C++ +++ S LK++ L D+C D L
Sbjct: 826 RLFNTLQKNGLATQLLVLLSQKYSTCIYDVTDEN---------SHLKLISSLQDECSDVL 876
Query: 768 VQLGTFLASSHAPDEYAARLPSLQELLRDYHVDADVAFFLHRPVINQKISAKLESLRKAX 827
L FL +P Y +PS ++L++D+H+ VAF+L R N S + A
Sbjct: 877 YLLMEFLNMVCSPKSYYKLIPSFEQLIQDFHIQPQVAFYLSR-YKNLDHSLTGSNTEDAM 935
Query: 828 XXXXXXXXXXXXRYNVASKEALEPIVSSIQPMLPARVLEDISPEFYVTFWSLSMYDLRVP 887
N AS S I +LP ++ + SP FY+TFW LS+YD+ VP
Sbjct: 936 DIDYENTSSP----NTASNPVWSIDNSVITELLPKQIWDYFSPNFYLTFWKLSLYDVFVP 991
Query: 888 VESYEREIERLKTAAANVSKDSSQGTKVKKEQERFNTLIEKLQEEXXXXXXXXXXXXXXX 947
+E YE E R ++ ++ + ++++ L LQ E
Sbjct: 992 LERYEFERSRAFDQIRQTDAANTFYSRHRHDRQKIMQLSNSLQNELKEHINSLESVRKVL 1051
Query: 948 XXECEDWFPARAV-------RSAKNETVTRLMQLCIFPRCVFTAADALYCAEFVHTVHSL 1000
+C WF V A+ L LCI PR + DALYCA+FV +HSL
Sbjct: 1052 QGDCVKWFIPNGVFPNGTRLEHARFNCARYLWTLCIAPRLKMSPHDALYCAKFVKLLHSL 1111
Query: 1001 KTPNFSTLLCYDRLF-CDITYSVMSCTEAEAARYGTFLCKVLTTAMRWHADKDAFHREC- 1058
TPNFST+ + LF + + S T+ EA +G FL +VL W+ DK + REC
Sbjct: 1112 GTPNFSTMSFLEILFNSQLPSFIFSMTQREADNFGRFLYEVLYDITSWYRDKILYERECL 1171
Query: 1059 --AHYPGFVTKYRVSKQFTEANDHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNA 1116
PGF + + + + + Y + + KWH +T CL S +Y+ I N+
Sbjct: 1172 ANGALPGFRLYWSDEQNDPDLSAVLPYNKFVLLFSKWHKYLTSYFESCLLSTEYMHIYNS 1231
Query: 1117 LIVLIRVLPHFPVLAKLSQIIEKKIDKVKEQEKIQRQDLYVLATVYSGQLRNKSSNMMNE 1176
+I+L ++LP FP++ + +++ +++K++EK R+DL VLA Y +L K ++
Sbjct: 1232 VIILEKILPCFPLIIESGSALKRAAERLKDEEK--REDLKVLALGYFAKLSKKQPEWVSF 1289
Query: 1177 ADF 1179
F
Sbjct: 1290 NSF 1292
Score = 78.2 bits (184), Expect = 7e-15
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 114 IVRELEPFISDKLLKERLEIDTLQDAGTLKNKNFYT-KFIKIKTKLYYKQRKFNLFREES 172
I + L+ F+ ++ L RL+ L++ + N +F K ++ T L Y+Q+KFNL REES
Sbjct: 116 IGKGLKEFLPEEWLLSRLDCKFLENINVVPNGDFLNRKIVRTNTSLLYRQKKFNLLREES 175
Query: 173 EGYSKLIVEL--------NQEINEDTEWKNLLEIIQSLIGCFNLDPNRVLDIILESF 221
EG+S L++ N+ +NED + + I S IG F+LDPN+VLD+IL F
Sbjct: 176 EGFSHLMINFFDALTCLRNKSLNEDYLIVQVNKSIISTIGAFDLDPNKVLDLILLLF 232
Score = 34.7 bits (76), Expect = 0.089
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 244 VISEVLGFKLSNMEILDNYTEPPPLMTVIALLLQHQVISFDDIYPWLRPDDVIIAKQADK 303
++S+VLG L M D+ M ++ALL+++ IS D+I+ L P D + K+ K
Sbjct: 295 IMSQVLGHNLQYMYKEDDENLESYFM-MVALLIKYNFISIDNIWAHLSPSDEELGKELGK 353
Query: 304 EIKAVQE--YIRKINIVSTKGPQTNAPTEFIED 334
+ E + K N ++ P P + IED
Sbjct: 354 YKDKLDEQTFKAKGNALTMAAP---LPDDEIED 383
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 1245 SKTYASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEEST---ILEQKRRR 1296
S + + L E E+E + + R D+R++R ++RDR + T E+KRR+
Sbjct: 1573 SDSQSPSNLREED-ERENSRRRARQDDRRDRDSRQQRDRPRDRTSRSAREEKRRK 1626
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 36.7 bits (81), Expect = 0.022
Identities = 24/97 (24%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 1246 KTYASKELEERSPEKEKRKTKVRGDERKERKMNR-KRDRAEESTILEQKRRRDEQKG-AI 1303
K +K EE ++E+++ K R E+K++++ R KR+ ++ E+K ++ +Q+
Sbjct: 627 KALEAKRQEEARKKREEQRLK-REQEKKQQELERQKREEKQKQKEREKKLKKQQQEADRE 685
Query: 1304 KMSGHQNGSQEDHHYDKFKREKSPFRDRSHEEARDKQ 1340
KM+ Q +E+ +R++ D+ EE R ++
Sbjct: 686 KMAREQRLREEEEKRILEERKRREKLDKEEEERRRRE 722
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/94 (20%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 1254 EERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGHQNGSQ 1313
+E+ +K+K+ + +ER+ R+ R ++A + LE KR+ + +K + + +
Sbjct: 594 KEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKA-LEAKRQEEARKKREEQRLKREQEK 652
Query: 1314 EDHHYDKFKREKSPFRDRSHEEARDKQYPFQRTK 1347
+ ++ KRE+ + ++ + +Q R K
Sbjct: 653 KQQELERQKREEKQKQKEREKKLKKQQQEADREK 686
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/90 (21%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 1251 KELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAI---KMSG 1307
+E +++ E++KR+ K + ER+++ ++++ E EQ+ R +E+K + K
Sbjct: 650 QEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRRE 709
Query: 1308 HQNGSQEDHHYDKFKREKSPFRDRSHEEAR 1337
+ +E+ + ++S ++R EA+
Sbjct: 710 KLDKEEEERRRRELLEKESEEKERRLREAK 739
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 1251 KELEERSPEKEKRK-TKVRGDERK-ERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGH 1308
+E+EE + K++R+ K+R E+K ++K K + EE E +R ++ +
Sbjct: 574 EEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKR 633
Query: 1309 QNGSQEDHHYDKFKREKSPFRDRSHEEAR-DKQYPFQRTK 1347
Q +++ + KRE+ + + R +KQ +R K
Sbjct: 634 QEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREK 673
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 1250 SKELEERSPEKEKRKTKVRGDERKERKMNR-KRDRAEESTILEQKRRRDEQKGAIKMSGH 1308
++ L E++ +K + K + + RK+R+ R KR++ ++ LE+++R ++QK +
Sbjct: 617 AERLAEQAAQKAL-EAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKL 675
Query: 1309 QNGSQEDHHYDKFKREKSPFRDRSHEEAR 1337
+ QE +K RE+ R R EE R
Sbjct: 676 KKQQQEADR-EKMAREQ---RLREEEEKR 700
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/103 (19%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 1249 ASKELEER--SPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMS 1306
A K+ EE+ E+EK++ ++ +R+E++ ++R++ + E R + ++ ++
Sbjct: 637 ARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREE 696
Query: 1307 GHQNGSQEDHHYDKFKREKSPFRDRS--HEEARDKQYPFQRTK 1347
+ +E +K +E+ R R +E+ +K+ + K
Sbjct: 697 EEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAK 739
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 34.7 bits (76), Expect = 0.089
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDERKERKM--NRKRDRAEESTILEQKRRRDEQKGAIKMS 1306
A +E EE++ + + K K +E+ +R+ N KR+ E++ ++ + E + +K
Sbjct: 633 AKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRE 692
Query: 1307 GHQNGSQEDHHYDKFKREKSP 1327
+N ++ K + +K+P
Sbjct: 693 TEENAKRKAEEEGKREADKNP 713
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 1245 SKTYASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIK 1304
+K A ++ + + EK KR+ + + E K R+ + + E+ +R E+K K
Sbjct: 601 AKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKA--K 658
Query: 1305 MSGHQNGSQEDHHYDKFKREKSPFRDRSHEE 1335
+N +E +K KRE R EE
Sbjct: 659 REAEENAKREAE--EKAKREAEENAKREAEE 687
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDERKERKM--NRKRDRAEESTILEQKRRRDEQKGAIKMS 1306
A +E EE++ + + K K +E+ +R+ N KR+ E++ +++ + E + K
Sbjct: 569 AKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKRE 628
Query: 1307 GHQNGSQEDHHYDKFKREKSPFRDRSHEEARDKQ 1340
+ +E +K KRE R EE ++
Sbjct: 629 AEEKAKREAE--EKAKREAEEKAKREAEEKAKRE 660
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDERKERKM--NRKRDRAEESTILEQKRRRDEQKGAIKMS 1306
A +E EE++ + + K K +E+ +R+ KR+ E++ ++ + E + K
Sbjct: 617 AKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKRE 676
Query: 1307 GHQNGSQEDHHYDKFKREKSPFRDRSHEE 1335
+N +E +K KRE R EE
Sbjct: 677 AEENAKREAE--EKVKRETEENAKRKAEE 703
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 1245 SKTYASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIK 1304
+K A ++ + + EK KR+ + + E K R+ + + E+ +R E+K K
Sbjct: 561 AKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKA--K 618
Query: 1305 MSGHQNGSQEDHHYDKFKREKSPFRDRSHEEARDKQ 1340
+ +E +K KRE R EE ++
Sbjct: 619 REAEEKAKREAE--EKAKREAEEKAKREAEEKAKRE 652
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 1252 ELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGHQNG 1311
E E + +EK + + + ++E + KR+ E++ +++ + E + K +N
Sbjct: 542 EAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENA 601
Query: 1312 SQEDHHYDKFKREKSPFRDRSHEEARDKQ 1340
+E +K KRE R EE ++
Sbjct: 602 KREAE--EKAKREAEEKAKREAEEKAKRE 628
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDE--RKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMS 1306
A +E EE++ + + K K +E ++E + KR+ E++ +++ + E + K
Sbjct: 577 AKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKRE 636
Query: 1307 GHQNGSQEDHHYDKFKREKSPFRDRSHEE 1335
+ +E +K KRE R EE
Sbjct: 637 AEEKAKREAE--EKAKREAEEKAKREAEE 663
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDERKERKM--NRKRDRAEESTILEQKRRRDEQKGAIKMS 1306
A +E EE + + + K K +E+ +R+ KR+ E++ +++ + E + K
Sbjct: 593 AKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKRE 652
Query: 1307 GHQNGSQEDHHYDKFKREKSPFRDRSHEEARDKQYPFQR 1345
+ +E K + E+ R+ R+ + +R
Sbjct: 653 AEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKR 691
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDERKERKM--NRKRDRAEES-TILEQKRRRDEQKGAIKM 1305
A +E EE++ + + K K +E+ +R+ KR+ E++ E+K +R+ ++ A K
Sbjct: 609 AKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENA-KR 667
Query: 1306 SGHQNGSQEDHHYDKFKREKSPFRDRSHEEARDK 1339
+ +E K + E+ R+ + E A+ K
Sbjct: 668 EAEEKAKREAEENAKREAEEKVKRE-TEENAKRK 700
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 1246 KTYASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKM 1305
K + ++E++ + KRK + + R E + N KR+ E++ +++ + E + K
Sbjct: 530 KLAIQQRIQEKAEAEAKRKAEEKA--RLEAEENAKREAEEQAKREAEEKAKREAEEKAKR 587
Query: 1306 SGHQNGSQEDHHYDKFKREKSPFRDRSHEEARDKQYPFQR 1345
+ +E K + E+ R+ + R+ + +R
Sbjct: 588 EAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKR 627
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDERKERKM--NRKRDRAEES-TILEQKRRRDEQKGAIKM 1305
A +E EE++ + + K K +E+ +R+ KR+ E + E+K +R+ ++ A K
Sbjct: 625 AKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENA-KR 683
Query: 1306 SGHQNGSQEDHHYDKFKREKSPFRD 1330
+ +E K K E+ R+
Sbjct: 684 EAEEKVKRETEENAKRKAEEEGKRE 708
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 1253 LEERSPEKEKRKTKVRGDERKERKMNRKRDRAEE--STILEQKRRRDEQKGAIKMSGHQN 1310
LE++ E E+++ K +ER+++++ K + +E I EQK + +EQ+ ++ Q
Sbjct: 118 LEKKRIEAERQRLKDE-EERRKKELMEKEKKEKERIRLIEEQKHKENEQR---RLKQEQI 173
Query: 1311 GSQEDHHYDKFKREKSPFRDRSHEEA 1336
++ + KR K F+D E++
Sbjct: 174 DAKRKEEEAREKRMKETFKDDPEEDS 199
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 1257 SPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGHQNGSQEDH 1316
S EK + T + + K N + D EE L Q+ ++ + + K ++ S+E
Sbjct: 576 SSEKIESGTSISTSDTKGGLANFENDSLEELERLIQQNNAEQDEPSYKFHKYEYSSEESG 635
Query: 1317 HYDKFKREK 1325
D+FK EK
Sbjct: 636 SEDEFKSEK 644
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 131 LEIDTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYSKLIVE-LNQEINED 189
+E+ Q G ++ K + ++K++++ F F EES GYS ++E LN++ +
Sbjct: 189 VELQNHQQEGMVQQKEILSTIKQLKSEIFDINSFFANFIEESAGYSNSLIEKLNEKFTSE 248
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 1246 KTYASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKM 1305
+T K+ E + P + RKT +++ ++ N K + E TI + ++E
Sbjct: 146 RTARPKKPEAKEPSPKSRKTD---EDKHDKDSNEKIEDVNEKTIKFADKSQEEFNENGPP 202
Query: 1306 SGHQNGSQEDHHYDKFKREKSPFRDRSHE 1334
SG NG H + KSP + S+E
Sbjct: 203 SGQPNG-----HIESDNESKSPSQKESNE 226
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 111
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 1255 ERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGA 1302
+R+P +++ + K + DE KER+ KR++ E+ +K R Q A
Sbjct: 31 QRTPYEKRMEQKRKLDEIKEREKELKREKEEQRAAHAEKIRTRRQAKA 78
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 1250 SKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRR---RDEQKGAIKMS 1306
SKEL+ E + K+ D+ KE+ +N ++ + + E + RDE+ +K+
Sbjct: 903 SKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKVD 962
Query: 1307 --GHQNGS 1312
G QN S
Sbjct: 963 IIGLQNAS 970
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex subunit
Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 1255 ERSPEKEKRKTKVRGDERKERKMNR-KRDRAEESTILEQKRRRDEQKGAIKMSGHQNGSQ 1313
E EK+ +K + + + ++++ R KR++ + E+K R E+ A KM + +
Sbjct: 73 EAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEK 132
Query: 1314 EDHHYDKFKREKSPFRDRSHEEARDKQ 1340
E + +R K RD+ E + Q
Sbjct: 133 ERIRLQEQQRRKEE-RDQKLREKEEAQ 158
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 885 RVPVESYEREIERLKTAAANVSKDSSQGTKVKKEQERFNTLIEKLQEE 932
++ +E +REI L+ SKD S +K+ KE F L+E L +E
Sbjct: 107 KIALEEDDREIAHLEKMLGIKSKDKSAHSKIDKE---FGWLLEDLDQE 151
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 1254 EERSPEKEKRKTKVRGDERKERKMNRKRDRAEE-STILEQKRRRDEQKGAIKMSGHQNGS 1312
+ RSP + + + + R +R R R ++ S R + + ++
Sbjct: 141 QSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERSSRSSR 200
Query: 1313 QEDHHYDKFKREKSPFRDRSHEEARDKQYPFQRT 1346
D+ Y+ + + DRSHE R + P +R+
Sbjct: 201 AHDYDYEDLRDD-----DRSHERKRSRSRPRERS 229
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 508
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 1246 KTYASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQK 1300
K+ KE + S +KEK++ K ++K +K RK + +E+ ++K++ + K
Sbjct: 457 KSSKLKEADGESSKKEKKEKK----DKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 1252 ELEERSPEKEKRKTKVRGDE--RKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMS 1306
++E +K+K+K D+ +K+RK +K ++A + + + +D A ++
Sbjct: 170 DIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEKARKLASMLESENKDNDANAAPLN 226
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 1271 ERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGHQNGSQEDHHYDKFKREKSPFRD 1330
+ +R+ N RDR T + RRD Q+ + +++ H + R +SP RD
Sbjct: 6 QNSQREDNYSRDRRSRFTE-DSYSRRDSQRSGNEAPRESRYYRKEEHLQERSRSRSPARD 64
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 28.7 bits (61), Expect = 5.8
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 1071 SKQFTEANDH-VGYEN--YRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRVLP-- 1125
SK FT+ +D+ V Y + + + +H+ I+ V L ++ ++ LP
Sbjct: 1435 SKMFTDPSDNDVSYLDGVEMNYLYAFHFSISNRFVFSLFMP---HLKKVEAIIYDKLPGS 1491
Query: 1126 --HFPVLAKLSQIIEKKIDKVKEQEKIQRQDLYVLATVYSGQLRNKSSNMMNEADFHQMS 1183
FP ++K+ + + K D + ++ I+ D ++SG R K+ +++E S
Sbjct: 1492 DMSFPSISKIYEELRSKFDNLIKESSIEYPDTLSCNVIFSGNER-KAYKLIDEKLLQYFS 1550
Query: 1184 DK 1185
K
Sbjct: 1551 TK 1552
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1246 KTYASKELEERSPEKEKRKTKVRGDERKER-KMNRKRDRAEESTILEQKRR-RDEQKGAI 1303
K K + S ++EK K K E+K++ K KR + ++S ++KR+ RD++
Sbjct: 127 KVKVRKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKS 186
Query: 1304 KMSG 1307
SG
Sbjct: 187 SKSG 190
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 1246 KTYASKELEERSPEKEKRKTKVRGDERK--ERKMNRKRDRAEESTILEQK--RRRDEQKG 1301
K+ A+K LE+ ++EK K + +E + K R+R EE ++++ R Q+
Sbjct: 865 KSVAAK-LEDARIQREKEKARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRKSQQK 923
Query: 1302 AIKMSGHQNGSQEDHHYDKFKREKSPFRDRSHEEARD 1338
A + + +E K K+++ + +S +E+ D
Sbjct: 924 ASEDDMSLSDDEEKQSGKKKKKDRKKRKSKSKQESSD 960
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 1251 KELEERSPEKEKRKTKVRGDERKE-RKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGHQ 1309
++LEE ++ D R+E +K+N ++ R E++ + + R R+ + I+M
Sbjct: 19 RKLEEFGQNPDEEIESSLKDVRQELQKLNEEQSRLEKNAQIPEYRVRESEAFLIRMQRRL 78
Query: 1310 NGSQEDHHYDKFKREKS 1326
++E+ ++K +R S
Sbjct: 79 ESAEEE--FEKQRRASS 93
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 1132 KLSQIIEKKIDKVKEQEKIQRQDLYVLATVYSGQLRNKSSNMMNEA 1177
+LS +EKK++ K++EK+ + L LA + + L K + EA
Sbjct: 366 ELSLSLEKKLEAKKQKEKVYKDKLDELANLETMVLEKKKAVATREA 411
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 1249 ASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAE-ESTILEQKRRRDEQKGAIKMSG 1307
A KE +E+ K R D + A+ ST + + R + G+ S
Sbjct: 317 AEKEKQEKEQRLFMLAQKAREDRMGRNAASSGPSHAKPRSTSVSSEERSRSRAGSF--SH 374
Query: 1308 HQNGSQEDHHYDKFKREKSPFRDRSHEEARD 1338
H ED + F+R + R+R + +D
Sbjct: 375 HSESENEDEDSEAFRRRQELRRERRRQAEKD 405
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1251 KELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQ 1299
K ER E ++ K R D+ K K NRK+ + ILE + +E+
Sbjct: 99 KPFHERLAEARNQERK-RSDKLKTMKKNRKQSFQRKRNILEDGKSEEEK 146
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 186 INEDTEWKNLLEIIQSLIGCFNLDPNRVLDIILESFEARPQLDALFIPLIKSYMADPHVI 245
++E T+ K LLEI+ S L + DI+LE +R L + L DPH
Sbjct: 1872 LSERTKMKGLLEIVTSAAEYEQLPIRKYEDIVLERIHSR-----LPVRLSNPNYEDPHTK 1926
Query: 246 SEVL 249
S +L
Sbjct: 1927 SFIL 1930
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 124 DKLLKERLEIDTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYSKLIVELN 183
++L +E E TL++ L +K+ Y K IK+ + + F L++
Sbjct: 425 NELPEEERETYTLEEGLGLPSKSIYKKTIKLVYTSEHAEEMFKALERMPCLTLPLVISRL 484
Query: 184 QEINEDTEWKNLLEIIQ 200
+E NE EWK++ +Q
Sbjct: 485 EEKNE--EWKSVKRSLQ 499
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 1253 LEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSG----H 1308
LE+ S E + + E+ ++ NR R S LE + ++ + S
Sbjct: 128 LEDESMEGINQSPQGISVEKLGKEDNRSRSSTPASPSLESHEFSESREAGLSQSNGFEAR 187
Query: 1309 QNGSQEDHHYDKFKREKSPFRDRSHEEARDKQ 1340
+G+ D ++DKF + K+ S D Q
Sbjct: 188 SHGTGFDEYFDKFSQRKTSSNTLSQLPVLDNQ 219
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 295
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 1248 YASKELEERSPEKEKRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIK 1304
Y K LE E KRK V K RK ++ +S I++ KR+ +E+KG +K
Sbjct: 42 YTDKLLEANDNETTKRKLLV--------KQKRKSNKEFQSNIIK-KRKDEERKGTLK 89
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,606,758
Number of Sequences: 5004
Number of extensions: 228866
Number of successful extensions: 926
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 835
Number of HSP's gapped (non-prelim): 84
length of query: 1347
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1266
effective length of database: 1,957,154
effective search space: 2477756964
effective search space used: 2477756964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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