GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000949-TA|BGIBMGA000949-PA|undefined
         (354 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061485-1|AAL29033.1|  867|Drosophila melanogaster LD45056p pro...    31   3.2  
AE014134-359|AAF51288.2|  867|Drosophila melanogaster CG7074-PA ...    31   3.2  
AE014296-2732|AAN11752.1|  739|Drosophila melanogaster CG13035-P...    30   5.6  
AE014296-2731|AAF49466.1|  717|Drosophila melanogaster CG13035-P...    30   5.6  

>AY061485-1|AAL29033.1|  867|Drosophila melanogaster LD45056p
           protein.
          Length = 867

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 141 GAADGSVGIITYEETTLSSNCLVEGRGLGSVVCLGWFYSNANLHLAVG----RNDGSVQL 196
           G ADG VGI  + + T  S+     R      CL W   +AN+ LA+G    RND  + +
Sbjct: 76  GLADGKVGICNFRD-TYDSSWEYTPRQQRMCTCLAWNELDANI-LAIGHDRHRNDTCITI 133

Query: 197 YLID 200
           + I+
Sbjct: 134 WDIE 137


>AE014134-359|AAF51288.2|  867|Drosophila melanogaster CG7074-PA
           protein.
          Length = 867

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 141 GAADGSVGIITYEETTLSSNCLVEGRGLGSVVCLGWFYSNANLHLAVG----RNDGSVQL 196
           G ADG VGI  + + T  S+     R      CL W   +AN+ LA+G    RND  + +
Sbjct: 76  GLADGKVGICNFRD-TYDSSWEYTPRQQRMCTCLAWNELDANI-LAIGHDRHRNDTCITI 133

Query: 197 YLID 200
           + I+
Sbjct: 134 WDIE 137


>AE014296-2732|AAN11752.1|  739|Drosophila melanogaster CG13035-PB,
           isoform B protein.
          Length = 739

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 37  TALSEPVTSMCVFGGDLILCSGRTITFYRD-SKEHQSYVCKDRVLDMAAFIAPNNAKVRL 95
           +A+S+P+  +C  GGDL +    T +   D  ++  + + ++++L +   ++ +  +V+ 
Sbjct: 451 SAISDPIDLICSRGGDLSMLEVLTESEVSDEGRQRVAMILEEQLLTLT--MSMSRPQVQF 508

Query: 96  LLLIAHKGAGILENGHLVAHI 116
           +L   H   G  EN  +V H+
Sbjct: 509 VLYQTHSIVG-TENEDMVQHV 528


>AE014296-2731|AAF49466.1|  717|Drosophila melanogaster CG13035-PA,
           isoform A protein.
          Length = 717

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 37  TALSEPVTSMCVFGGDLILCSGRTITFYRD-SKEHQSYVCKDRVLDMAAFIAPNNAKVRL 95
           +A+S+P+  +C  GGDL +    T +   D  ++  + + ++++L +   ++ +  +V+ 
Sbjct: 451 SAISDPIDLICSRGGDLSMLEVLTESEVSDEGRQRVAMILEEQLLTLT--MSMSRPQVQF 508

Query: 96  LLLIAHKGAGILENGHLVAHI 116
           +L   H   G  EN  +V H+
Sbjct: 509 VLYQTHSIVG-TENEDMVQHV 528


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,995,307
Number of Sequences: 52641
Number of extensions: 691973
Number of successful extensions: 1267
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1267
Number of HSP's gapped (non-prelim): 4
length of query: 354
length of database: 24,830,863
effective HSP length: 86
effective length of query: 268
effective length of database: 20,303,737
effective search space: 5441401516
effective search space used: 5441401516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)