GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000948-TA|BGIBMGA000948-PA|IPR004939|Anaphase-promoting
complex subunit 10, IPR000437|Prokaryotic membrane lipoprotein lipid
attachment site, IPR008979|Galactose-binding like
         (182 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071207-1|AAL48829.2|  195|Drosophila melanogaster RE25242p pro...   278   3e-75
AE013599-2493|AAF57848.2|  195|Drosophila melanogaster CG11419-P...   278   3e-75
AE013599-3998|AAM70802.1|  459|Drosophila melanogaster CG30424-P...    31   0.92 
AY069378-1|AAL39523.1|  368|Drosophila melanogaster LD08328p pro...    28   6.5  
AE014297-860|AAF54328.2|  368|Drosophila melanogaster CG11986-PA...    28   6.5  

>AY071207-1|AAL48829.2|  195|Drosophila melanogaster RE25242p
           protein.
          Length = 195

 Score =  278 bits (682), Expect = 3e-75
 Identities = 122/178 (68%), Positives = 151/178 (84%)

Query: 5   EKDPLVYERSGTVREVGNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNIQFQ 64
           E+DPL  ER G VREVG  A+WSLSSCKPGFG+++LRD+ M+TYWQSDGQLPHLVNIQF 
Sbjct: 18  EEDPLAEERLGFVREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFH 77

Query: 65  KKTMVSHIYIYTDYKLDESYTPSRISIRAGTHFNDLQEIEVIELIEPSGWEMIPVKDIHD 124
           K+T +S IYIYTDYKLDESYTPSRISIR+GT+FNDLQE++V++L EP+GW  IP+KD + 
Sbjct: 78  KRTNISQIYIYTDYKLDESYTPSRISIRSGTNFNDLQELQVMDLTEPTGWVQIPIKDGNV 137

Query: 125 RPIRTYMIQIAVLSNHQNGRDTHMRQIKVHSPCEPTSFDINKFRNFSTVQFQQYATIR 182
           + IRT+M+QIAV+SNHQNGRDTHMRQI++H+P E   + +  F  F TV FQ++ATIR
Sbjct: 138 KSIRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKHYPLELFGKFGTVDFQKFATIR 195


>AE013599-2493|AAF57848.2|  195|Drosophila melanogaster CG11419-PA
           protein.
          Length = 195

 Score =  278 bits (682), Expect = 3e-75
 Identities = 122/178 (68%), Positives = 151/178 (84%)

Query: 5   EKDPLVYERSGTVREVGNHAIWSLSSCKPGFGIDQLRDDCMETYWQSDGQLPHLVNIQFQ 64
           E+DPL  ER G VREVG  A+WSLSSCKPGFG+++LRD+ M+TYWQSDGQLPHLVNIQF 
Sbjct: 18  EEDPLAEERLGFVREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHLVNIQFH 77

Query: 65  KKTMVSHIYIYTDYKLDESYTPSRISIRAGTHFNDLQEIEVIELIEPSGWEMIPVKDIHD 124
           K+T +S IYIYTDYKLDESYTPSRISIR+GT+FNDLQE++V++L EP+GW  IP+KD + 
Sbjct: 78  KRTNISQIYIYTDYKLDESYTPSRISIRSGTNFNDLQELQVMDLTEPTGWVQIPIKDGNV 137

Query: 125 RPIRTYMIQIAVLSNHQNGRDTHMRQIKVHSPCEPTSFDINKFRNFSTVQFQQYATIR 182
           + IRT+M+QIAV+SNHQNGRDTHMRQI++H+P E   + +  F  F TV FQ++ATIR
Sbjct: 138 KSIRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKHYPLELFGKFGTVDFQKFATIR 195


>AE013599-3998|AAM70802.1|  459|Drosophila melanogaster CG30424-PA
           protein.
          Length = 459

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 72  IYIYTDYKLDESYTPSRISIRAGTHFNDLQEIEVIELIEPSGWEMIP 118
           IY+Y DY+    Y P+ I + A  +    +++E  +    S WE IP
Sbjct: 188 IYVYGDYEYSVDYVPA-ICLAAEQNVLPTKQLECFKRANTSYWEAIP 233


>AY069378-1|AAL39523.1|  368|Drosophila melanogaster LD08328p
           protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 78  YKLDESYTPSRIS--IRAGTHFNDLQEIEVIELIEPSGWEMIP 118
           Y+   +  P+ I+  I +  HF+D ++ E   ++ P  W MIP
Sbjct: 60  YQASYNIAPTDITPVIVSAAHFSDAEDQECARVVTPMMWGMIP 102


>AE014297-860|AAF54328.2|  368|Drosophila melanogaster CG11986-PA
           protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 78  YKLDESYTPSRIS--IRAGTHFNDLQEIEVIELIEPSGWEMIP 118
           Y+   +  P+ I+  I +  HF+D ++ E   ++ P  W MIP
Sbjct: 60  YQASYNIAPTDITPVIVSAAHFSDAEDQECARVVTPMMWGMIP 102


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.136    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,438,073
Number of Sequences: 52641
Number of extensions: 389834
Number of successful extensions: 738
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 736
Number of HSP's gapped (non-prelim): 5
length of query: 182
length of database: 24,830,863
effective HSP length: 81
effective length of query: 101
effective length of database: 20,566,942
effective search space: 2077261142
effective search space used: 2077261142
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)