Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000947-TA|BGIBMGA000947-PA|undefined
(164 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024211-2|AAF36064.2| 152|Caenorhabditis elegans Hypothetical ... 116 6e-27
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 29 2.2
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 28 3.8
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 28 3.8
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 28 3.8
U42439-6|AAA83510.1| 266|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF016443-13|AAC24275.2| 333|Caenorhabditis elegans Serpentine r... 27 6.6
Z12017-10|CAA78053.1| 537|Caenorhabditis elegans Hypothetical p... 27 8.8
Z11505-11|CAA77591.1| 537|Caenorhabditis elegans Hypothetical p... 27 8.8
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 27 8.8
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 27 8.8
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 27 8.8
AC006817-1|ABA00162.1| 163|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC024211-2|AAF36064.2| 152|Caenorhabditis elegans Hypothetical
protein Y76B12C.3 protein.
Length = 152
Score = 116 bits (280), Expect = 6e-27
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 3 WKCFVL--AVLVTYDGAVAEFS--TEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKE 58
W F+L AV+ G V E+ E+C + GF L C C++L D+ LE L+ C +
Sbjct: 2 WVIFLLLAAVVSPMFGEVEEYKIDVEECKAAGFNPETLKCGLCERLSDYHLETLLTDCLQ 61
Query: 59 CCHSDESASKEKKYARAILEVCTCKFPAYPQIQAFVKSDRPAKF-PNLQIKYVRGLDPII 117
CC +E K +KY AILEVC C +PQ+QAFV D +F +++K+VRG+ P +
Sbjct: 62 CCIKEEE-FKHEKYPTAILEVCECNLARFPQVQAFVHKDMARQFGGKVKVKHVRGVRPQV 120
Query: 118 KLLDKDGIVKDTVAIEKWNTDSVEEFLNTHLD 149
L D D K+ +++EKW+TD++ +F N L+
Sbjct: 121 ALKDADFKTKEVLSVEKWDTDTLIDFFNQWLE 152
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 39 SSCDQLKDFSLEQLVDHCKECCHSDESASKEKKYARAILEVCTCKFPAYPQIQAFVKSDR 98
S+C Q K F + C EC H +E R+ + VC+ PA P + A + +
Sbjct: 568 SACHQSK-FVMTAFEGKCDECLHVQCRYGEE---CRSGVCVCSYNCPANPPLSARICGEN 623
Query: 99 PAKFPNL 105
+P+L
Sbjct: 624 GVLYPSL 630
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 37 LCSSCDQLKDFSLEQ--LVDHCKECCHSDESASKEKKYARAILEV 79
L SS +Q+ D +Q L+D KE HS ES ++E + + +L++
Sbjct: 721 LASSEEQILDLKNQQESLIDDLKEKLHSAESTNQELQVSLEMLKI 765
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 74 RAILEVCTCKFPAYPQIQAFVKSDRPAKFPNL 105
+ I+E C C P YP + F + +P + N+
Sbjct: 560 KVIVEACGCADPMYPVAEMFGNNTKPCQAVNM 591
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 74 RAILEVCTCKFPAYPQIQAFVKSDRPAKFPNL 105
+ I+E C C P YP + F + +P + N+
Sbjct: 522 KVIVEACGCADPMYPVAEMFGNNTKPCQAVNM 553
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 41 CDQLKDFSLEQLVDHCKEC-----CHSDESASKEKKYARAILEVCTC 82
CD LKD S ++CKEC C + EKK ++L C
Sbjct: 144 CDGLKDCSDGSDEENCKECQSIYSCRAHIEEESEKKDKTSVLPTLIC 190
>U42439-6|AAA83510.1| 266|Caenorhabditis elegans Hypothetical
protein F19C7.1 protein.
Length = 266
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 6 FVLAVLVTYDGAVAEFSTEDCASLGFIKAN 35
F + Y AVA+F T++C S F N
Sbjct: 3 FAIVFAALYGAAVAQFGTDNCVSAQFQACN 32
>AF016443-13|AAC24275.2| 333|Caenorhabditis elegans Serpentine
receptor, class h protein190 protein.
Length = 333
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 6 FVLAVLVTYDGAVAEFSTED-CASLGFIKANLLCSSCDQLKDFSLEQ 51
FVLA TY A F C +GF L+ +S QLKD + +
Sbjct: 187 FVLASDYTYQLIAAVFIISQLCFEIGFFVTYLVWNSYKQLKDMKISK 233
>Z12017-10|CAA78053.1| 537|Caenorhabditis elegans Hypothetical
protein R08D7.7 protein.
Length = 537
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 54 DHCKECCHSDESASKEKKYARAILEVCTCKFP-AYPQIQAFVKSD 97
D+ EC + +K+ARA+ E C F Y Q F KSD
Sbjct: 383 DYTFECSEEELKNKHPEKFARAVFE-SQCLFKLLYTQKMGFKKSD 426
>Z11505-11|CAA77591.1| 537|Caenorhabditis elegans Hypothetical
protein R08D7.7 protein.
Length = 537
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 54 DHCKECCHSDESASKEKKYARAILEVCTCKFP-AYPQIQAFVKSD 97
D+ EC + +K+ARA+ E C F Y Q F KSD
Sbjct: 383 DYTFECSEEELKNKHPEKFARAVFE-SQCLFKLLYTQKMGFKKSD 426
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 37 LCSSCDQLKDFSLEQLVDHC-KECCHSDESAS 67
+C D + + LVDHC K+ CH++ + +
Sbjct: 125 MCECADGYEGVHCQHLVDHCAKQPCHNNATCT 156
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 123 DGIVKDTVAIEKWNTDSVEEFLNTHLDKEHDDEPD 157
DGIVK AI+ NTD EE ++E DD D
Sbjct: 328 DGIVKIPKAID-GNTDDHEEDYEDEDEEEEDDNED 361
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 123 DGIVKDTVAIEKWNTDSVEEFLNTHLDKEHDDEPD 157
DGIVK AI+ NTD EE ++E DD D
Sbjct: 379 DGIVKIPKAID-GNTDDHEEDYEDEDEEEEDDNED 412
>AC006817-1|ABA00162.1| 163|Caenorhabditis elegans Hypothetical
protein Y72A10A.1 protein.
Length = 163
Score = 26.6 bits (56), Expect = 8.8
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 60 CHSDESASKE----KKYARAILEVCTCKFPA-YPQIQAFVKSDRPAKFPNLQIKYVRGLD 114
CH DE +K+ + + VC P YP + + S K P LQ Y+R LD
Sbjct: 52 CHFDEHEGPLMAILEKFEQRVERVCLVDKPVDYPFLPDSLFSYMANKMPKLQFIYLRELD 111
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.136 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,346,549
Number of Sequences: 27539
Number of extensions: 177610
Number of successful extensions: 558
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 552
Number of HSP's gapped (non-prelim): 14
length of query: 164
length of database: 12,573,161
effective HSP length: 76
effective length of query: 88
effective length of database: 10,480,197
effective search space: 922257336
effective search space used: 922257336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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