Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000946-TA|BGIBMGA000946-PA|IPR004583|DNA repair protein
Rad4
(961 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 35 0.009
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 35 0.009
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 33 0.047
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 28 1.3
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 27 2.3
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 27 2.3
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 27 2.3
X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein... 26 5.4
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 26 5.4
AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding pr... 25 7.1
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 7.1
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 25 7.1
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 25 9.4
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 25 9.4
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 35.1 bits (77), Expect = 0.009
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 425 KSRTCRKRSHTFESNKTNKNNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIES--KRSK 482
K+ R + T +S+ ++ ++S D + + S+ + E+++ F + E K++K
Sbjct: 352 KNNFVRPANETDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISPAEQYKKQAK 411
Query: 483 -VTRHTRSNNVQVKPEQRVSHRDLKKISD---KSKNDVTEDLVTIIKSRIKEAKSDSNKL 538
V R N + + + + K + +ND + D + S + S S++
Sbjct: 412 EVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSSSSE- 470
Query: 539 RSKAKKIKEESDSDSDLLPEEEVRKNIPESDDD 571
S S+SDSD L EE + IPES D
Sbjct: 471 -SDEHDFYSSSESDSDSLSSEEFYQPIPESMKD 502
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 35.1 bits (77), Expect = 0.009
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 425 KSRTCRKRSHTFESNKTNKNNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIES--KRSK 482
K+ R + T +S+ ++ ++S D + + S+ + E+++ F + E K++K
Sbjct: 352 KNNFVRPANETDDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISTAEQYKKQAK 411
Query: 483 -VTRHTRSNNVQVKPEQRVSHRDLKKISD---KSKNDVTEDLVTIIKSRIKEAKSDSNKL 538
V R N + + + + K + +ND + D + S + S S++
Sbjct: 412 EVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSSSSE- 470
Query: 539 RSKAKKIKEESDSDSDLLPEEEVRKNIPESDDD 571
S S+SDSD L EE + IPES D
Sbjct: 471 -SDEHDFYSSSESDSDSLSSEEFYQPIPESMKD 502
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 32.7 bits (71), Expect = 0.047
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 26/208 (12%)
Query: 376 ELEITKRTLANAKPAKRKAIKDIPLVSDENKKSVSSKYFQTNTATVDEKKSRTCRKRSHT 435
E++ + L NA+ A + A KD+ DE KSV AT ++ R K T
Sbjct: 259 EIQKAQDRLKNAQKALKDAKKDVVTAKDE--KSV--------LATEHQQLLREKTKLDLT 308
Query: 436 FE--SNKTNKNNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNV- 492
S++ +N + + R K I E EK E+ R K +R N+
Sbjct: 309 ISDLSDEVQGDNKSKERAEQELERLKITIAEKEKELEQVRPRYEAMRRKEEECSRELNLK 368
Query: 493 -QVKPEQRVSHRDLKKISDKSKND--VTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEES 549
Q + E + S K + D + +L ++ K +IK+ S NKL+ KK
Sbjct: 369 EQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNK-QIKDKISHQNKLQDDLKK----- 422
Query: 550 DSDSDLLPEEEVRKNIPESDDDFKPPKI 577
D+ + E+ K I E + F+ ++
Sbjct: 423 ----DIAKQGELEKKIQEHTESFEQLRV 446
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 555 LLPEEEVRKNIPESDDDFKPPKISPRPSTSKKID----RRVLSSDDEKPKN 601
L+ E+V E D DF PPK P K D + DD KP++
Sbjct: 182 LIDNEKVESGSLEDDWDFLPPKKIKDPEAKKPEDWDDRATIADPDDTKPED 232
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 497 EQRVSHRDLKKISDKSKNDVTED---LVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDS 553
++ + ++ +K S++D E+ V +++ R K+A + + KK S++DS
Sbjct: 6 KRNIKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADS 65
Query: 554 DLLPEEE 560
EEE
Sbjct: 66 SHSSEEE 72
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 497 EQRVSHRDLKKISDKSKNDVTED---LVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDS 553
++ + ++ +K S++D E+ V +++ R K+A + + KK S++DS
Sbjct: 6 KRNIKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADS 65
Query: 554 DLLPEEE 560
EEE
Sbjct: 66 SHSSEEE 72
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 27.1 bits (57), Expect = 2.3
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 276 DLPQKRLKKDPEQSTQNPSRGDRKQTNRSLKGVNSKHGNPTNVLIDENNDNIAMKRSTKL 335
D+ QK + D QS Q P + + Q + + H NP + ++ N D I S +
Sbjct: 631 DVGQKADQTDHHQS-QQPQQQQQHQHHHHHH--HHHHQNPNDHFVNTNTDTIKRSHSAQ- 686
Query: 336 LPNRAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAI 395
LP R + S D +P A++ + +L + T T P ++
Sbjct: 687 LPQR--EDARSRTPLTAVSDYSPATAAAAAAAAAAKERELLMYETSSTTTTLTPPPSESG 744
Query: 396 KDIPLVS 402
++ PL+S
Sbjct: 745 RETPLLS 751
>X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein
Agm2 protein.
Length = 599
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 673 AELDWWEKALSPWVGPKTARDKEEDEY--INKMQLEAPLPKSI 713
A+ DWWE A + P++ +D D +N ++ P KS+
Sbjct: 19 AQKDWWESASFYQIYPRSFQDSNGDGIGDLNGIKSRLPYLKSL 61
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 576 KISPRPSTSKKIDRRVLSSDDEKPKNKIDIW-CEIFAEELEQWICVDVVSGKIHD 629
K+ P PS++ +I V +DE P+ + D + CEI E ++ + G I++
Sbjct: 373 KLQPAPSSTMEITVIVTDVNDEIPRFRSDGYECEI-GENAQENTLARFIDGSINE 426
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 374 KLELEITKRTLANAKPAKRKAI 395
KL++EI KRT+ KP+ + +
Sbjct: 9 KLQMEILKRTVCRLKPSAHRCL 30
>AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding
protein AgamOBP56 protein.
Length = 181
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 140 REQTTDSDEGSQMNYK---DVWSQNVDQSEEIAKKAFMELE 177
R + D+ + YK D ++N+++ EI K+ FME+E
Sbjct: 19 RSASEVQDDKCKRKYKCCNDANTENMEKIHEIKKQCFMEME 59
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/99 (15%), Positives = 43/99 (43%)
Query: 446 SLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHRDL 505
S+ + K+ + + + E E+++ + IE ++ + R R + K ++ R+
Sbjct: 436 SIHERMKLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREK 495
Query: 506 KKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKK 544
++ + + + K R +EA + + R + ++
Sbjct: 496 EERERQQREKEQREREQREKEREREAARERERERERERE 534
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 226 VDGNDDDENIFQNIMQVDGNDDILG----VKTRSTRSARAGNVNSLKNKEDTEDDLPQKR 281
V NDD+E+I + +D ND+ + + ++ + G V + + P K
Sbjct: 45 VQKNDDEEDIVDSDFSIDENDEPISDAEEEPAKGSKRRKVGTVTKAYREPAPKKQAPAK- 103
Query: 282 LKKDPEQSTQNPS 294
K+P+ + S
Sbjct: 104 -AKEPKAKAERQS 115
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 135 PIADVREQTTDSDEGSQMNYKDVWSQNVDQSEEIAKKAFMELEQHKNKIEEVKESI 190
PIAD+ EQT+ S G + + ++ + + K + E+ K + E+V I
Sbjct: 232 PIADLVEQTSGSGSGLPLLVQRTIAKQIQMVHSVGKGRYGEVWLAKWRDEKVAVKI 287
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae
chloride/bicarbonate anion exchanger protein.
Length = 1102
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 13 YKHEDSDEETGDFSDSGSEAHISDVPSSE 41
+KH + E GD +GSEA P ++
Sbjct: 55 HKHHQASRENGDKGSTGSEAERPVTPPAQ 83
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.310 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 926,063
Number of Sequences: 2123
Number of extensions: 38521
Number of successful extensions: 67
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 49
Number of HSP's gapped (non-prelim): 22
length of query: 961
length of database: 516,269
effective HSP length: 71
effective length of query: 890
effective length of database: 365,536
effective search space: 325327040
effective search space used: 325327040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -