Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000946-TA|BGIBMGA000946-PA|IPR004583|DNA repair protein
Rad4
(961 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 32 0.026
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 31 0.034
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 27 0.96
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 25 2.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 25 2.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 2.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 25 2.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 2.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 2.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 2.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 2.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 25 3.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 3.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 3.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 6.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 6.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 6.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 6.8
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 31.9 bits (69), Expect = 0.026
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 13/199 (6%)
Query: 410 SSKYFQTNTATVDEKKSRTCRKR----SHTFESNKTNKNNSLDVKEKVTKARTKSAINEV 465
S +F+ + V +R R R S + ++N + + R
Sbjct: 22 SRDWFRISAGCVSRISNRISRNRVLLRGQCISSRRNGRHNVHSLAFGAIQLRQLLKRQLC 81
Query: 466 EKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHRDLKKISDKSKNDVTEDLVTIIK 525
EK K +S R K T S+N Q+ ++RV + + + + DLV ++
Sbjct: 82 EKRKEVSIITEDSSR-KQTIDPLSSNTQITRKRRVGIVENQYAVENNTGSSLCDLVQGLE 140
Query: 526 SRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRKNIPESDDDFKPPKISPRPSTSK 585
E + +NK+ K+KK E +++ D++ + V +N E+ D+F +I S SK
Sbjct: 141 RLFDEKNAGNNKITMKSKK---EQNAEEDIV--DPVEEN--ETYDEFDTIRIPIVRSLSK 193
Query: 586 K-IDRRVLSSDDEKPKNKI 603
+ + +D ++ K I
Sbjct: 194 SPPNDEGIETDSDRRKGSI 212
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 31.5 bits (68), Expect = 0.034
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 243 DGNDDILGVKT----RSTRSARAGNVNSLKNKEDTEDDLPQKRLKKDPEQSTQNPSRGDR 298
D N ILG R+TR R N N+ D ++ Q ++ + N G+R
Sbjct: 400 DVNFRILGANVDDLMRNTRCGRYHNQNAGNQNADNQNADNQNANNQNADNQNANKQNGNR 459
Query: 299 KQTNRSLKGVNSKHGNPTNVLIDENNDNIAMKRSTKLLPNRAIKSIISDKSDGKEKDKTP 358
+ NR + N ++GN N +N N + K NR + +D +
Sbjct: 460 QNDNR--QNDNKQNGNRQN----DNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDN 513
Query: 359 KENAS 363
K N +
Sbjct: 514 KRNGN 518
Score = 24.6 bits (51), Expect = 3.9
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 229 NDDDENIFQNIMQVDGNDDILGVKTRSTRSARAGNVNSLKNKEDTEDDLPQKRLKKDPEQ 288
N D++N N + N D ++ N K + ++D Q +++ +
Sbjct: 431 NADNQNA-DNQNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNK 489
Query: 289 STQNPSRGDRKQTNR---SLKGVNSKHGNPTNVLIDENNDN 326
N G+++ N+ + + N ++GN N + NDN
Sbjct: 490 QNGNRQNGNKQNDNKQNGNRQNDNKRNGNRQNDNQNNQNDN 530
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 26.6 bits (56), Expect = 0.96
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 113 NLSESDSNDEETPK----VAVKKFTPPIADVREQTTDSDEGSQMNYKDVWSQNVDQSEEI 168
N+ E ++ND +T K ++ + + +V+ T DS GS ++ +QN+ Q+ +
Sbjct: 370 NIDEYNNNDLDTKKWNNKISALRALNDLYNVKN-TLDSYNGSM----EI-NQNIAQNIDH 423
Query: 169 AKKAFMELEQHKNKIEEVKESIQN 192
AK ++ + I E K +I+N
Sbjct: 424 AKNTIIDYRNNDLSINEEKRTIEN 447
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 25.0 bits (52), Expect = 2.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 529 KEAKSDSNKLRSKAKKIKE-ESDSDSDLLPEEEVRKNIPESDDDFKPPKISPRPSTSKK 586
K+ KSD + LR +K + S + + +KN + DD P K P+ ST+ K
Sbjct: 180 KQIKSDLDVLRQSVEKSELWVYKSKASEEHGNKKKKNKEDEDDGATPRKAPPQLSTTDK 238
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 2.9
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 24/254 (9%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDI 398
R I+ + S++S + D + NAS+ ++ + KLE + + A ++
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINA-TEL 128
Query: 399 PLVSDENKKSVSSKYFQTNTATVDEKKS-----------RTCRKRSHTFE----SNKTNK 443
+ E + + K + T TV+ K+ RT FE N K
Sbjct: 129 QKIKLEIHRDLPGK---STTTTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTK 185
Query: 444 NNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHR 503
N ++ + V K + N E KY + R+ +HT S+ + + R +R
Sbjct: 186 INKIEEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNR 243
Query: 504 DLKKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRK 563
+ +K D+ + + +++ R K S + K K E + +E +
Sbjct: 244 EYRK-KDRRYEKLHNEKEKLLEER-TSCKRYSRSREREQKLYKNEREYRKYGETSKERSR 301
Query: 564 NIPESDDDFKPPKI 577
N E + K PKI
Sbjct: 302 NRTEREKS-KEPKI 314
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 2.9
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 24/254 (9%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDI 398
R I+ + S++S + D + NAS+ ++ + KLE + + A ++
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINA-TEL 128
Query: 399 PLVSDENKKSVSSKYFQTNTATVDEKKS-----------RTCRKRSHTFE----SNKTNK 443
+ E + + K + T TV+ K+ RT FE N K
Sbjct: 129 QKIKLEIHRDLPGK---STTTTVEVKRDTINPEDVILIRRTGEGSKPIFEREEIKNVLTK 185
Query: 444 NNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHR 503
N ++ + V K + N E KY + R+ +HT S+ + + R +R
Sbjct: 186 INKIEEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNR 243
Query: 504 DLKKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRK 563
+ +K D+ + + +++ R K S + K K E + +E +
Sbjct: 244 EYRK-KDRRYEKLHNEKEKLLEER-TSCKRYSRSREREQKLYKNEREYRKYGETSKERSR 301
Query: 564 NIPESDDDFKPPKI 577
N E + K PKI
Sbjct: 302 NRTEREKS-KEPKI 314
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 2.9
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 24/254 (9%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDI 398
R I+ + S++S + D + NAS+ ++ + KLE + + A ++
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINA-TEL 128
Query: 399 PLVSDENKKSVSSKYFQTNTATVDEKKS-----------RTCRKRSHTFE----SNKTNK 443
+ E + + K + T TV+ K+ RT FE N K
Sbjct: 129 QKIKLEIHRDLPGK---STTTTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTK 185
Query: 444 NNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHR 503
N ++ + V K + N E KY + R+ +HT S+ + + R +R
Sbjct: 186 INKIEEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNR 243
Query: 504 DLKKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRK 563
+ +K D+ + + +++ R K S + K K E + +E +
Sbjct: 244 EYRK-KDRRYEKLHNEKEKLLEER-TSCKRYSRSREREQKLYKNEREYRKYGETSKERSR 301
Query: 564 NIPESDDDFKPPKI 577
N E + K PKI
Sbjct: 302 NRTEREKS-KEPKI 314
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 2.9
Identities = 48/250 (19%), Positives = 90/250 (36%), Gaps = 16/250 (6%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLEL----------EITKRTLANAK 388
R I+ + S++S + D + NAS+ ++ + KLE E + +
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINATELQ 129
Query: 389 PAKRKAIKDIPLVSDENKKSVSSKYFQTNTATVDEKKSRTCRKRSHTFE-SNKTNKNNSL 447
K + +D+P S V + + + E N K N +
Sbjct: 130 KIKLEIHRDLPGKSTTTTAEVKRDTINPEDVILIRRTGEGSKPIFEREEIKNVLTKINKI 189
Query: 448 DVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHRDLKK 507
+ + V K + N E KY + R+ +HT S+ + + R +R+ +K
Sbjct: 190 EEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNREYRK 247
Query: 508 ISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRKNIPE 567
D+ + + +++ R K S + K K E + +E +N E
Sbjct: 248 -KDRRYEKLHNEKEKLLEER-TSCKRYSRSREREQKLYKNEREYRKYGETSKERSRNRTE 305
Query: 568 SDDDFKPPKI 577
+ K PKI
Sbjct: 306 REKS-KEPKI 314
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.0 bits (52), Expect = 2.9
Identities = 52/263 (19%), Positives = 101/263 (38%), Gaps = 24/263 (9%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDI 398
R I+ + S++S + D + NAS+ ++ + KLE + + A ++
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINA-TEL 128
Query: 399 PLVSDENKKSVSSKYFQTNTATVDEKKS-----------RTCRKRSHTFE----SNKTNK 443
+ E + + K + T TV+ K+ RT FE N K
Sbjct: 129 QKIKLEIHRDLPGK---STTTTVEVKRDIINPEDVIPIRRTGEGSKPIFEREEIKNVLTK 185
Query: 444 NNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHR 503
N ++ + V K + N E KY + R+ +HT S+ + + R +R
Sbjct: 186 INKIEEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSHYSRERSCSRDRNR 243
Query: 504 DLKKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRK 563
+ K+ D+ + + +++ R + ++ R + K K E+ +E +
Sbjct: 244 EYKE-KDRRYEKLHNEKEKLLEERTSRKRYSRSREREQ-KSYKNENSYRKYRETSKERSR 301
Query: 564 NIPESDDDFKPPKISPRPSTSKK 586
+ E + K PKI S + K
Sbjct: 302 DRKERERS-KEPKIISSLSNNYK 323
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 25.0 bits (52), Expect = 2.9
Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 23/226 (10%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDI 398
R I+ + S++S + D + NAS+ ++ + KLE + + A ++
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINA-TEL 128
Query: 399 PLVSDENKKSVSSKYFQTNTATVDEKKS-----------RTCRKRSHTFE----SNKTNK 443
+ E + + K + T TV+ K+ RT FE N K
Sbjct: 129 QKIKLEIHRDLPGK---STTTTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTK 185
Query: 444 NNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHR 503
N ++ + V K + N E KY + R+ +HT S + + R +R
Sbjct: 186 INKIEEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNR 243
Query: 504 DLKKISDKSKNDVTEDLVTIIKSRI-KEAKSDSNKLRSKAKKIKEE 548
+ +K D+ + + +++ R +E S S + K+ K + E
Sbjct: 244 EYRK-KDRRYEKLHNEKEKLLEERTSRERYSRSREREQKSYKNERE 288
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.0 bits (52), Expect = 2.9
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 278 PQKRLKKDPEQSTQNPSRGDRKQTNRSLKGVNSKHGNPTNVLIDENNDNIAMKRSTKLLP 337
PQ + + P+Q Q + ++Q + + + G TN D+ N NI + S
Sbjct: 822 PQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRGPMTN---DDFNPNIEEEASDS-AQ 877
Query: 338 NRAIKSIISDK 348
RAI I S K
Sbjct: 878 GRAILKIPSYK 888
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 24.6 bits (51), Expect = 3.9
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 832 LFKECMLPKGTVRIKLPGLNRVARKLNIDCAPAMTGF 868
+F C LP T I ++ + KL DC P +T F
Sbjct: 627 VFLICWLPFFTCNI----MDAICTKLTADCQPGVTAF 659
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 3.9
Identities = 52/254 (20%), Positives = 95/254 (37%), Gaps = 24/254 (9%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDI 398
R I+ + S++S + D + NAS+ ++ + KLE + + A ++
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINA-TEL 128
Query: 399 PLVSDENKKSVSSKYFQTNTATVDEKKS-----------RTCRKRSHTFE----SNKTNK 443
+ E + + K + T TV+ K+ RT FE N K
Sbjct: 129 QKIKLEIHRDLPGK---STTTTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTK 185
Query: 444 NNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHR 503
N ++ + V K + N E KY + R+ +HT S + + R +R
Sbjct: 186 INKIEEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNR 243
Query: 504 DLKKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRK 563
+ +K D+ + + +++ R K S + K K E + +E +
Sbjct: 244 EYRK-KDRRYEKLHNEKEKLLEER-TSCKRYSRSREREQKLYKNEREYRKYGETSKERSR 301
Query: 564 NIPESDDDFKPPKI 577
N E + K PKI
Sbjct: 302 NRTEREKS-KEPKI 314
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 3.9
Identities = 55/264 (20%), Positives = 105/264 (39%), Gaps = 33/264 (12%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDI 398
R I+ + S++S + D + NAS+ ++ + KLE + + A ++
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLESSDDISLFRGPEGIQINA-TEL 128
Query: 399 PLVSDENKKSVSSKYFQTNTATVDEKKS-----------RTCRKRSHTFE----SNKTNK 443
+ E + + K + T TV+ K+ RT FE N K
Sbjct: 129 QKIKLEIHRDLPGK---STTTTVEVKRDIINPEDVILIRRTGEGSKPIFEREEIKNVLTK 185
Query: 444 NNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKRSKVTRHTRSNNVQVKPEQRVSHR 503
N ++ + V K + N E KY + R+ +HT S + + R +R
Sbjct: 186 INKIEEHDTVLVVNIKKSGN--ESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNR 243
Query: 504 DLKKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRSKAKKIKEESDSDSDLLPEEEVRK 563
+ +K D+ + + K + E ++ S+K S++++ +++S + E E RK
Sbjct: 244 EYRK-KDRQYEKLHNE-----KEKFLEERT-SHKRYSRSREREQKSYKN-----EREYRK 291
Query: 564 NIPESDDDFKPPKISPRPSTSKKI 587
S + F+ + R SK I
Sbjct: 292 YRETSKERFRDRRERERSKESKII 315
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLE 376
R I+ + S++S + D + NAS+ ++ + KLE
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLE 107
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLE 376
R I+ + S++S + D + NAS+ ++ + KLE
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLE 107
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 339 RAIKSIISDKSDGKEKDKTPKENASSKPQSCKIVPKLE 376
R I+ + S++S + D + NAS+ ++ + KLE
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKLE 107
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 6.8
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 320 IDENNDNI-AMKRSTKLLPNRAIKSIISDKSDGKEKDKTPKE 360
+ +N N+ +M R+ LLP ++ ++S K+ TPK+
Sbjct: 752 VAKNKKNVGSMSRNKALLPVIKPANVNKEQSPNSTKETTPKK 793
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.310 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,408
Number of Sequences: 429
Number of extensions: 13281
Number of successful extensions: 38
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 21
length of query: 961
length of database: 140,377
effective HSP length: 64
effective length of query: 897
effective length of database: 112,921
effective search space: 101290137
effective search space used: 101290137
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)
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