GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000945-TA|BGIBMGA000945-PA|undefined
         (123 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   7.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   7.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 100 VRFRDRLDDNMSRDATEGQTWATS 123
           + ++D  D+N+S   T+ Q + T+
Sbjct: 372 INYKDTNDNNVSAVTTQHQGYPTN 395


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 13  FLGLCSALSGSTNVAKR 29
           FLGLC   +G   V K+
Sbjct: 359 FLGLCGPKNGLLEVIKQ 375


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.134    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,634
Number of Sequences: 317
Number of extensions: 827
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 123
length of database: 114,650
effective HSP length: 50
effective length of query: 73
effective length of database: 98,800
effective search space:  7212400
effective search space used:  7212400
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)