Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000944-TA|BGIBMGA000944-PA|IPR001436|Alpha crystallin,
IPR002068|Heat shock protein Hsp20, IPR008978|HSP20-like chaperone
(187 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 32 0.046
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 28 0.98
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 27 1.3
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 27 1.7
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 27 2.3
SPCC1827.08c |pof7|SPCC70.11c|F-box protein Pof7|Schizosaccharom... 27 2.3
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 27 2.3
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 26 3.0
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 26 4.0
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 26 4.0
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 4.0
SPBC16E9.15 |||heat shock factor binding protein |Schizosaccharo... 25 5.2
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 5.2
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 25 5.2
SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces p... 25 9.1
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 9.1
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 32.3 bits (70), Expect = 0.046
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 73 SRQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTP--EEIVVKTVDNKLLVHAKHEE 130
SRQ++ + W +++ L D +L +++ S P E + K L AK
Sbjct: 235 SRQVSAHNFWPKISASLGFPSPDAISLLIQYYNSYLLPYEEAWLAAQQQQKSLQQAKANH 294
Query: 131 KSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLP 173
++ +S + Y ++ P T PEA+ ++ S G L ++P P
Sbjct: 295 SANVQSRPKNYPQK---PVQTTPEAVHANGSMHGSLHSKSPSP 334
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 27.9 bits (59), Expect = 0.98
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 15 GDFSVIDTEFSS-IRERFDAEMRKMEEEMSK 44
G F+ +D+E IRE +AE++KMEE+ K
Sbjct: 468 GVFTRVDSELGRRIREATEAEVKKMEEKAPK 498
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 27.5 bits (58), Expect = 1.3
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 81 HWDSLNSPLIQDEG---DGKTLKLRFDVSQYTPEEI-----VVKTVDNKLLVHAKHEEKS 132
+++S P+ DEG D + + RF + + I ++ V + + + H ++S
Sbjct: 305 NFNSYIKPVAGDEGRVEDEEFEENRFSIEDIEIDSIPAVRRLLGDVMSDIPYYMSHHKES 364
Query: 133 DTKSVYREYNREFLLPKGTNP 153
KSV RE NR + L K NP
Sbjct: 365 IIKSVIREANRVYHLWKDCNP 385
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 27.1 bits (57), Expect = 1.7
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 104 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRD 163
D S T EE+V + D K L K+D +S + E ++ ++ + +P ++ SLS D
Sbjct: 109 DHSSDTEEEVVSE--DQKQL------NKTDDESTFIESHQIYIQGETKSPSSVSQSLSGD 160
Query: 164 GVLTVEAPLPQLAITDRNIPIQK 186
L + + N PI+K
Sbjct: 161 PSLKPAEVFDRKQSAEINSPIEK 183
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 17 FSVIDTEFSSIRERFDAEMRKMEE-EMSKFRSELMNRESNN 56
F+ ID F S+ +R D+ +KME + RS ++ R+ N
Sbjct: 197 FNSIDRRFDSMEQRLDSMDQKMETIDARSCRSIMLTRKLEN 237
>SPCC1827.08c |pof7|SPCC70.11c|F-box protein
Pof7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 123 LVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA-PLPQL 175
L H HE D +S+YR R L + E + S S + +LTV + P P L
Sbjct: 49 LAHKVHE---DVESIYRRLERLQLCKRNEEEEMLNSDAS-EAMLTVSSVPSPTL 98
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 17 FSVIDTEFSSIRERFDAEMRKMEE-EMSKFRSELMNRESNN 56
F+ ID F S+ +R D+ +KME + RS ++ R+ N
Sbjct: 197 FNSIDRRFDSMEQRLDSMDQKMETIDARSCRSIMLTRKLEN 237
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 26.2 bits (55), Expect = 3.0
Identities = 20/80 (25%), Positives = 29/80 (36%)
Query: 1 MADSGLKRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKX 60
+AD G KR L D + + ++R + R EEE + + E + E N
Sbjct: 903 VADIGSKRLGRDSLPDAVIENAGTEAMRREAEERRRAEEEEYERSQQESSSNEENENASR 962
Query: 61 XXXXXXXXQHSDSRQLAEPS 80
SR A PS
Sbjct: 963 TSGARFSFSSKASRLSARPS 982
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 25.8 bits (54), Expect = 4.0
Identities = 9/41 (21%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 20 IDTEFSSIRERFDAEMRKMEEEM---SKFRSELMNRESNNF 57
I ++FS + E +++++R+ EE++ ++ + + +N S +
Sbjct: 457 ISSKFSQLAEEYESQLREKEEDLIRANRLKQDTLNEISRTY 497
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 28 RERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEPSHWDSLNS 87
++R +AE +++++E + + ELM +E + + ++ R+L + + +++
Sbjct: 120 KKRIEAERQRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQRRLKQ----EQIDA 175
Query: 88 PLIQDEGDGKTLKLRF 103
++E K +K F
Sbjct: 176 KRKEEEAREKRMKETF 191
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.8 bits (54), Expect = 4.0
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 105 VSQYTPEEIVVKTVDNKLLVHAKHEEKS-DTKSVYREYNREFLLPKGTNPEAIKSSL 160
V TP + V DNK LV K EK + +S E +E K T PE + +L
Sbjct: 1347 VPDSTPSDAVASETDNKNLVENKAVEKRVEARSSANERKQEERRRK-TTPEGNRRAL 1402
>SPBC16E9.15 |||heat shock factor binding protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 75
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 15 GDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 55
GDF + +FS E + ++EE M E MN++S+
Sbjct: 31 GDFETLQKQFSEKLETMSTRLDQLEESM----REAMNKKSS 67
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 83 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNK 121
+S+ SP + EG +LK R + TP+ + T+D K
Sbjct: 554 NSITSPGVLPEGMAASLKKRTTNTAATPQAALPTTLDTK 592
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 115 VKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKGTNPEAI 156
VK+ NK LV K + + KSV+ +++L K E I
Sbjct: 80 VKSTSNKELVQRKASKPTKQKSVFTPLEQQYLELKKNYQETI 121
>SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 301
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 111 EEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLP 148
+E + T D KL+ K DTK ++ N E L P
Sbjct: 12 QETLFTTADKKLMRSTKFPASYDTKVDMKKVNIEVLKP 49
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 4 SGLKRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNN 56
S L+ + KL + ++ + + + K+EE +SK+ + + ++E NN
Sbjct: 383 SSLRIELEDKLAEIDMLRNKLLKEEHKHHSTSEKLEE-LSKYVASIQDKERNN 434
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.130 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,294
Number of Sequences: 5004
Number of extensions: 34385
Number of successful extensions: 99
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 88
Number of HSP's gapped (non-prelim): 18
length of query: 187
length of database: 2,362,478
effective HSP length: 69
effective length of query: 118
effective length of database: 2,017,202
effective search space: 238029836
effective search space used: 238029836
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
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