Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000943-TA|BGIBMGA000943-PA|IPR001388|Synaptobrevin
         (120 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   4.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   4.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   4.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   4.3  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   4.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   5.7  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 23  KVDEVVGIMRVNVEKVLERDQKLS 46
           ++ +V+G+   +  KVLE  QK+S
Sbjct: 234 ELGQVLGLQTTDERKVLEVLQKMS 257


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 23  KVDEVVGIMRVNVEKVLERDQKLS 46
           ++ +V+G+   +  KVLE  QK+S
Sbjct: 234 ELGQVLGLQTTDERKVLEVLQKMS 257


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 23  KVDEVVGIMRVNVEKVLERDQKLS 46
           ++ +V+G+   +  KVLE  QK+S
Sbjct: 234 ELGQVLGLQTTDERKVLEVLQKMS 257


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 23  KVDEVVGIMRVNVEKVLERDQKLS 46
           ++ +V+G+   +  KVLE  QK+S
Sbjct: 234 ELGQVLGLQTTDERKVLEVLQKMS 257


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 23  KVDEVVGIMRVNVEKVLERDQKLS 46
           ++ +V+G+   +  KVLE  QK+S
Sbjct: 233 ELGQVLGLQTTDERKVLEVLQKMS 256


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)

Query: 69  LKRKYWWQNL 78
           +KR+Y+W N+
Sbjct: 152 MKREYYWPNM 161


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.127    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,539
Number of Sequences: 317
Number of extensions: 374
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 120
length of database: 114,650
effective HSP length: 50
effective length of query: 70
effective length of database: 98,800
effective search space:  6916000
effective search space used:  6916000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)