Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000943-TA|BGIBMGA000943-PA|IPR001388|Synaptobrevin
(120 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0459 + 3533718-3533916,3535009-3535150,3535290-3535410,353... 66 7e-12
06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334 48 3e-06
10_01_0303 - 3337454-3337544,3338358-3338521,3338624-3338805,333... 46 1e-05
07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893,832... 45 1e-05
02_05_1125 + 34282559-34282796,34283247-34283437,34283540-342836... 45 1e-05
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 44 4e-05
07_01_0680 + 5128023-5128212,5128629-5128667,5129496-5129637,512... 39 0.001
12_02_1272 + 27475302-27475491,27476792-27476876,27477076-274771... 35 0.020
02_01_0678 - 5045565-5045834,5046900-5046995 31 0.33
02_01_0265 - 1754861-1755063,1755186-1755360,1755558-1755653,175... 30 0.58
07_03_1286 + 25482632-25482685,25483948-25484145,25484242-254844... 29 0.76
12_02_0218 - 15817184-15817480,15817564-15817734,15818241-15818477 29 1.3
03_06_0257 - 32697469-32697520,32698183-32698301,32698536-326985... 28 1.8
04_04_0787 + 28057609-28057740,28058000-28058148,28058640-28058805 27 3.1
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 27 4.1
04_03_0387 - 15251816-15251905,15251999-15252069,15252098-152523... 27 4.1
01_06_1457 + 37508187-37508421,37509012-37509109,37509791-375099... 27 4.1
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 27 5.4
11_05_0020 + 18430006-18430191,18431675-18431746,18432380-18432538 26 7.1
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457... 26 7.1
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 26 9.4
06_01_0688 - 5022703-5022805,5023615-5023694,5024305-5024381,502... 26 9.4
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 26 9.4
>03_01_0459 +
3533718-3533916,3535009-3535150,3535290-3535410,
3535513-3535575,3535677-3535823
Length = 223
Score = 66.1 bits (154), Expect = 7e-12
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKL 69
P DK LA+ +A+V EV G+M N+EKVL+R +K+ L ++ + L+ A F + K+
Sbjct: 128 PEEIDK-LAKVKAQVTEVKGVMMQNIEKVLDRGEKIELLVDKTEDLRSQAQDFRKAGTKI 186
Query: 70 KRKYWWQNLKMML 82
+RK WW+N+KM L
Sbjct: 187 RRKMWWENMKMKL 199
>06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334
Length = 197
Score = 47.6 bits (108), Expect = 3e-06
Identities = 19/65 (29%), Positives = 40/65 (61%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
R+ + + ++ +V +M N++KVLER +L L ++ +Q +F++QA + + WW
Sbjct: 127 RINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRFRNTTWW 186
Query: 76 QNLKM 80
+N+K+
Sbjct: 187 RNVKL 191
>10_01_0303 -
3337454-3337544,3338358-3338521,3338624-3338805,
3339088-3339322
Length = 223
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 26 EVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKMM 81
E+ +M N+EK+L+R +++S L ++ +Q A F +Q+ +L+R W +N K++
Sbjct: 139 EIHTVMVDNIEKILDRGERISLLVDKTSTMQDSAFHFRKQSRRLRRALWMKNAKLL 194
>07_01_0987 +
8320205-8320472,8321549-8321690,8321773-8321893,
8322190-8322264,8322784-8322846,8322934-8323086
Length = 273
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 36 EKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKMML 82
+K L R +KLSEL ++ LQ A +F+++ K++RK W QN+K+ L
Sbjct: 201 KKTLGRGEKLSELQDKTSDLQSQAQEFKKKGVKIRRKTWLQNMKIKL 247
>02_05_1125 +
34282559-34282796,34283247-34283437,34283540-34283629,
34283630-34283793,34284139-34284352
Length = 298
Score = 45.2 bits (102), Expect = 1e-05
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 26 EVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
+V +M N++KVLER +L L ++ +Q +F++QA + + WW+N+K+
Sbjct: 173 QVRNVMIDNIDKVLERGDRLELLVDKTATMQGNTMRFKRQARRFRNTVWWRNVKL 227
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 43.6 bits (98), Expect = 4e-05
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQ 64
+LA+ +A+V EV G+M N+EKVL+R +K+ L ++ + L+ A F Q
Sbjct: 130 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQ 178
>07_01_0680 +
5128023-5128212,5128629-5128667,5129496-5129637,
5129727-5129847,5129951-5130013,5130114-5130203,
5130572-5130619,5131114-5131260
Length = 279
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQ 56
+LA+ +A+V EV G+M N+EKVL+R +K+ L ++ + L+
Sbjct: 143 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLR 183
Score = 30.3 bits (65), Expect = 0.44
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 59 AAQFEQQAGKLKRKYWWQNLKMML 82
A F QQ K++RK W QN+K+ L
Sbjct: 232 AQDFRQQGTKVRRKMWLQNMKIKL 255
>12_02_1272 +
27475302-27475491,27476792-27476876,27477076-27477196,
27477443-27477586
Length = 179
Score = 34.7 bits (76), Expect = 0.020
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 21/67 (31%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
+LA+ +A+V EV GIM N++K AA F QQ +++RK W+
Sbjct: 111 KLAKVKAQVSEVKGIMMENIDK---------------------AADFRQQGTRVRRKMWY 149
Query: 76 QNLKMML 82
QN+K+ L
Sbjct: 150 QNMKIKL 156
>02_01_0678 - 5045565-5045834,5046900-5046995
Length = 121
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKR 71
++R+A+ +V +RV VE++ E++Q E ++ DA+ +FE L +
Sbjct: 45 NRRVAEEYNNYGDVASGLRVFVEQLNEKNQSFGEYVSQIDAIDQQVTEFEAVVSMLDK 102
>02_01_0265 -
1754861-1755063,1755186-1755360,1755558-1755653,
1756110-1756256,1756343-1756511,1756661-1756812,
1756898-1756968,1757064-1757247,1757332-1757523,
1757664-1757771
Length = 498
Score = 29.9 bits (64), Expect = 0.58
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQ 64
++ L ++ +DE+ +++ NV+ + +K+ EL + D L+ A EQ
Sbjct: 143 EQELKSSKRSLDELTAMLKANVDAINNFTRKMEELKRQRDDLKALEANLEQ 193
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 2 EEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQ 61
+EQ S+ R D+ A +A VD + R E +RD + N +Q GA
Sbjct: 142 KEQELKSSKRSLDELTAMLKANVDAINNFTRKMEELKRQRDDLKALEANLEQTVQDGAKD 201
Query: 62 FEQ 64
EQ
Sbjct: 202 LEQ 204
>07_03_1286 +
25482632-25482685,25483948-25484145,25484242-25484464,
25484762-25484958,25485150-25485237,25487103-25487197,
25487585-25487705,25487795-25487831,25487924-25487951,
25488175-25488327,25488666-25488768,25488868-25488932
Length = 453
Score = 29.5 bits (63), Expect = 0.76
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 2 EEQGGSSAP--RVSDKRLAQTQAKVDE-VVGIMRVNVEKVLERDQKLSELDNRADA 54
EE GS P R S KRL T +D+ VV ++ +++ E+D + + ADA
Sbjct: 197 EETKGSGEPNGRCSKKRLKSTANTMDDQVVPFVKAELQEAREKDADIHDNSMEADA 252
>12_02_0218 - 15817184-15817480,15817564-15817734,15818241-15818477
Length = 234
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 20 TQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQA 66
TQA+ DE V + EK E+ QK++EL R + H + QQA
Sbjct: 92 TQAQWDEFVALTTSAEEK--EKSQKMAELARRNEYPHHSVSTGYQQA 136
>03_06_0257 -
32697469-32697520,32698183-32698301,32698536-32698556,
32698903-32698979,32699331-32699477,32699561-32699721,
32700320-32700522
Length = 259
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
+ + LA+ ++ EV IM NV++VL +KL ++ + L + +A L R+
Sbjct: 137 TQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVTEMSTRLTSDTRMYADKAKDLNRQ 196
Query: 73 Y 73
+
Sbjct: 197 F 197
>04_04_0787 +
28057609-28057740,28058000-28058148,28058640-28058805
Length = 148
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 13 SDKRLAQTQAK--VDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 70
++K A+ +AK + E I + ++LE K D +GAA + G++
Sbjct: 31 AEKEAARIKAKTLMIEDYAIFEQMIREILEEGIKGDSARAERDITTNGAAATKSTEGRIG 90
Query: 71 RKYWWQ 76
K WW+
Sbjct: 91 IKDWWR 96
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 23 KVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
K ++ N KVLE QKLS + H AA+ + +A K++R+
Sbjct: 321 KFSKLQNEQNANRLKVLEIQQKLSSEKIEQTKISHLAAKEQMEAAKVQRE 370
>04_03_0387 -
15251816-15251905,15251999-15252069,15252098-15252323,
15252344-15252496,15252570-15252656,15252745-15252948,
15253038-15253159,15253354-15253507,15254329-15254434,
15254507-15254617,15256468-15256622
Length = 492
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 31 MRVNVEKVLERDQKLSELDNRADA--LQHGAAQFEQQAGKLKRKYWWQNLKM 80
+R+ +K++ ++ +D RA + L ++ Q GKLK KY+ NL M
Sbjct: 204 IRIYHQKMITEVKRKFAIDGRAKSWLLHQLDGKWRQYKGKLKGKYYKPNLPM 255
>01_06_1457 +
37508187-37508421,37509012-37509109,37509791-37509904,
37510361-37510426,37510659-37510745,37510902-37511012
Length = 236
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADAL 55
P +DK L + Q +DE I+ +E VL+R ++L L ++ L
Sbjct: 151 PAEADK-LMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSSDL 195
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
+KRL + Q + DE+ ++LE+D KL++L + L+ + E + L+++
Sbjct: 1243 EKRLLEVQKESDELS-------REILEKDSKLNQLQEMIERLETNLSSLESENQVLRQQ 1294
>11_05_0020 +
18430006-18430191,18431675-18431746,18432380-18432538
Length = 138
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 34 NVEKVLERDQKLSELDN----RADALQHGAAQFEQQAGKL 69
NV + + RD++ + +DN R +A + GAAQ+ +AG +
Sbjct: 11 NVAEGVRRDRRGNAMDNVPDPRGEASERGAAQWTWRAGTI 50
>11_04_0418 -
17443989-17444082,17445153-17445406,17445709-17445783,
17446156-17446377,17446789-17446941,17447031-17447167,
17447615-17447933
Length = 417
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 37 KVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
KVLE QKLS + H AA+ + +A K++R+
Sbjct: 212 KVLEIQQKLSSEKIEQAKISHLAAKEQMEAAKVQRE 247
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 33 VNVEKVLERDQKLSEL-DNRADALQHGAAQFEQQAGKLKRKY 73
V K LE+++K + L +N D G +E++ LK+K+
Sbjct: 339 VKAVKDLEKEKKATHLLENLCDEFAFGIRNYEEEVRLLKQKH 380
>06_01_0688 -
5022703-5022805,5023615-5023694,5024305-5024381,
5024670-5024816,5025654-5025876
Length = 209
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
+ + LA+ ++ EV IM NV++VL +KL ++ + L + +A L R+
Sbjct: 90 TQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVTEMSTRLTSDTRIYADKAKDLNRQ 149
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/46 (21%), Positives = 26/46 (56%)
Query: 21 QAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQA 66
++K +E+ + +E +++ ++ +L + DAL+ +E+QA
Sbjct: 1353 ESKNEEIESKLHEALEMAAQKEAEVKDLSKKLDALEIELGYYEEQA 1398
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.127 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,388,043
Number of Sequences: 37544
Number of extensions: 62994
Number of successful extensions: 187
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 168
Number of HSP's gapped (non-prelim): 26
length of query: 120
length of database: 14,793,348
effective HSP length: 73
effective length of query: 47
effective length of database: 12,052,636
effective search space: 566473892
effective search space used: 566473892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
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