Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000943-TA|BGIBMGA000943-PA|IPR001388|Synaptobrevin
(120 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034) 36 0.009
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.44
SB_109| Best HMM Match : Spectrin (HMM E-Value=0.002) 28 1.8
SB_9891| Best HMM Match : KE2 (HMM E-Value=1) 28 2.3
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 27 5.4
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 26 7.2
SB_2311| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 26 9.5
SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07) 26 9.5
SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_30686| Best HMM Match : BTB (HMM E-Value=0.52) 26 9.5
SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089) 26 9.5
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 26 9.5
>SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034)
Length = 629
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRA 52
GS+ SD +++ + ++ VV +M+ N+ KVL+R KL +L +++
Sbjct: 541 GSTNKPPSDNNISRVKNEIKGVVDVMQTNIAKVLDRGAKLDDLQDKS 587
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 30.3 bits (65), Expect = 0.44
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQ----KLSELDNRADALQHGAAQ 61
G +A DK L + + E+ + + + E ++ +EL+ R AL+ AA+
Sbjct: 293 GKTAKEGVDKELEHYKGQAAELENLSLTQQKALAEMEEMYNTNTAELEQRIQALEKEAAE 352
Query: 62 FEQQAGKLKRKY 73
EQ+ +L KY
Sbjct: 353 TEQKLNELMEKY 364
>SB_109| Best HMM Match : Spectrin (HMM E-Value=0.002)
Length = 365
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
D RL + + + + +E + E+ ++L L +R ALQH Q G L+R+
Sbjct: 161 DARLTEAEVARAGWTPVQDLVIESLNEQMEELKLLQDRIAALQHMFEQMSNTEGDLRRR 219
>SB_9891| Best HMM Match : KE2 (HMM E-Value=1)
Length = 572
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 29 GIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 73
GI + +E +E QK+ ELD + + Q G + KLK++Y
Sbjct: 454 GIAELELE--VEAQQKMEELDKQLNLQQSGLEAVDVNLPKLKQEY 496
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 11 RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQK-LSELDNRADALQHGAAQFEQ 64
R KR + + +VD+V +R + EK L+ QK + E+ + LQ A FEQ
Sbjct: 1483 RALRKRAREAENEVDDVKEKLR-DAEKKLKSAQKDVVEITEEKEGLQKMATAFEQ 1536
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 26.6 bits (56), Expect = 5.4
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLE-RDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
D+R+ + QA+ E NV K E RD+++ + + DA + A +QQ LK +
Sbjct: 506 DERINEEQARA-ECNYQTDPNVIKEYESRDKEIKSMSGQIDAQESNLAAKQQQIANLKER 564
Query: 73 YWWQNLKMML 82
W L+ +L
Sbjct: 565 -WLVPLQELL 573
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 39 LERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
L+++ +++EL++ A G A+ E + K K K W
Sbjct: 1391 LDQENRIAELESSLKAALEGKAKAEAELQKNKSKIW 1426
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 19 QTQAKVDEVVGIMRVNVEKVLERDQKLSELDNR-ADALQHGAAQFEQQAGKLKRK 72
+ + + DE++ R+ +KV E +Q + EL + DAL A + + ++ +K
Sbjct: 1987 ELKMREDEMLDYKRITDQKVQESEQMVEELKKQHEDALLAAEADYHSKMEEMLKK 2041
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 1 MEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDN 50
++E+ G + ++ ++ QAK DEVV + +V +R KL + D+
Sbjct: 928 IQEEAGRLLGSYAGEKASEIQAKEDEVVQAWKNLNLRVRQRTDKLHDADD 977
>SB_2311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 10 PRVSDKRLAQTQA-KVDEVVGIMRVNVEKVLERDQKLSELDN 50
PRV+ L + + K +V+ I+R NV +L+R + S++D+
Sbjct: 176 PRVASYWLVKLDSIKRRKVIDIVRTNVRAILQRVWRSSDVDS 217
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 25.8 bits (54), Expect = 9.5
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 1 MEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA 60
+EEQ +++ + A+ Q +E G +RV E+++ K EL N+ + L
Sbjct: 1213 LEEQIAKKREQLAKEAGAKRQKLKEEYEGKLRVIYEELVSERSKNKELMNQNNQLSQKVK 1272
Query: 61 QFEQQAGKLKR 71
E K K+
Sbjct: 1273 LLEGVTTKQKK 1283
>SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)
Length = 1118
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 2 EEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSEL 48
+E+ SS R L + +DE + V ++V E+DQ+L EL
Sbjct: 715 QERETSSRLRKVHSELTHARRALDEERVLRSVRDQQVQEKDQRLGEL 761
>SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1275
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 11 RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQ 56
+ DK +A+ + +V I +N+EK LE D+ + E + A A++
Sbjct: 976 KAEDKSIAKRKPEVT----INAINMEKQLEEDEPIDEEEEFAKAME 1017
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 12 VSDKRLAQTQAKVDEVVGIMRVNVEKV-LERDQKLSELDNRADALQHGAAQFEQQAGKLK 70
+S++ L + ++ + + R+ ++ + R+ ELDN+ ++L+ QAGKLK
Sbjct: 787 LSNELLVSIELQLSKALMSKRLEIKDTSISRELVKKELDNQMESLRKVKDITSMQAGKLK 846
>SB_30686| Best HMM Match : BTB (HMM E-Value=0.52)
Length = 137
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRA 52
G + P +D++ +A VD+ + M N E+V+ + + S L +A
Sbjct: 83 GGTDPNSADQKALGARALVDKCIAFMEENAEQVV-KSRGFSNLPKQA 128
>SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089)
Length = 374
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
+RL + A+ D + + V ++++ E +QKL A + A + +A KL+ K
Sbjct: 124 ERLKEQLAQKDSAINKLGVELKELHEIEQKLDGKAEELAAEKRKATRATSEADKLREK 181
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
K+LA+ V EV+ + + E + +E +R DA+ + A QF Q + ++
Sbjct: 641 KKLAEDMEAVHEVINLSKAQEESMA------TEFKSRGDAMLNCAGQFAQSCADVAQR 692
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.127 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,547,670
Number of Sequences: 59808
Number of extensions: 63887
Number of successful extensions: 277
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 261
Number of HSP's gapped (non-prelim): 23
length of query: 120
length of database: 16,821,457
effective HSP length: 74
effective length of query: 46
effective length of database: 12,395,665
effective search space: 570200590
effective search space used: 570200590
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
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