Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000943-TA|BGIBMGA000943-PA|IPR001388|Synaptobrevin
(120 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein. 122 4e-28
BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated memb... 122 4e-28
BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated memb... 122 4e-28
BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated memb... 122 4e-28
AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated memb... 122 4e-28
AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein. 122 4e-28
Z48924-1|CAA88760.1| 118|Homo sapiens Vamp1 protein. 115 4e-26
M36200-1|AAA60603.1| 118|Homo sapiens SYB1 protein. 115 4e-26
CR542231-1|CAG47027.1| 116|Homo sapiens VAMP1 protein. 115 4e-26
CR542214-1|CAG47010.1| 116|Homo sapiens VAMP1 protein. 115 4e-26
BC023286-1|AAH23286.1| 117|Homo sapiens vesicle-associated memb... 115 4e-26
AF060538-1|AAC28336.1| 116|Homo sapiens vesicle associated memb... 115 4e-26
Z98884-2|CAB63146.1| 100|Homo sapiens vesicle-associated membra... 114 8e-26
U64520-1|AAB05814.1| 100|Homo sapiens synaptobrevin-3 protein. 114 8e-26
CR542154-1|CAG46951.1| 100|Homo sapiens VAMP3 protein. 114 8e-26
CR542145-1|CAG46942.1| 100|Homo sapiens VAMP3 protein. 114 8e-26
BT007327-1|AAP35991.1| 100|Homo sapiens vesicle-associated memb... 114 8e-26
BC007050-1|AAH07050.1| 100|Homo sapiens vesicle-associated memb... 114 8e-26
BC003570-1|AAH03570.1| 100|Homo sapiens vesicle-associated memb... 114 8e-26
BC005941-1|AAH05941.1| 100|Homo sapiens vesicle-associated memb... 112 2e-25
Z98751-4|CAI21808.1| 141|Homo sapiens vesicle-associated membra... 63 2e-10
Z98751-3|CAM28272.1| 140|Homo sapiens vesicle-associated membra... 63 2e-10
CR457011-1|CAG33292.1| 141|Homo sapiens VAMP4 protein. 63 2e-10
BC031264-1|AAH31264.1| 141|Homo sapiens VAMP4 protein protein. 63 2e-10
BC007019-1|AAH07019.1| 140|Homo sapiens vesicle-associated memb... 63 2e-10
BC005974-1|AAH05974.1| 141|Homo sapiens VAMP4 protein protein. 63 2e-10
AL035296-1|CAA22896.1| 141|Homo sapiens hypothetical protein pr... 63 2e-10
AF044310-1|AAC24032.1| 141|Homo sapiens VAMP 4 protein. 62 4e-10
CR456995-1|CAG33276.1| 100|Homo sapiens VAMP5 protein. 57 1e-08
BT006700-1|AAP35346.1| 100|Homo sapiens vesicle-associated memb... 57 1e-08
BC001634-1|AAH01634.1| 100|Homo sapiens vesicle-associated memb... 57 1e-08
AC016753-3|AAY24341.1| 100|Homo sapiens unknown protein. 57 1e-08
AF053233-1|AAC08434.1| 100|Homo sapiens endobrevin protein. 56 4e-08
CR542215-1|CAG47011.1| 116|Homo sapiens VAMP5 protein. 49 4e-06
BC017891-1|AAH17891.1| 116|Homo sapiens vesicle-associated memb... 49 4e-06
AF054825-1|AAC97473.1| 116|Homo sapiens VAMP5 protein. 49 4e-06
AC016753-4|AAY24342.1| 116|Homo sapiens unknown protein. 49 4e-06
X92396-1|CAA63133.1| 220|Homo sapiens ORF protein. 43 3e-04
BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1 pr... 43 3e-04
AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1 va... 43 3e-04
AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAM... 43 3e-04
AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1 pr... 43 3e-04
BC001364-1|AAH01364.1| 215|Homo sapiens SEC22B protein protein. 37 0.014
U95735-1|AAB81131.1| 198|Homo sapiens SNARE protein Ykt6 protein. 34 0.10
CR542008-1|CAG46805.1| 198|Homo sapiens YKT6 protein. 34 0.10
CR456989-1|CAG33270.1| 198|Homo sapiens YKT6 protein. 34 0.10
BT007078-1|AAP35741.1| 198|Homo sapiens SNARE protein Ykt6 prot... 34 0.10
BC007319-1|AAH07319.1| 198|Homo sapiens YKT6 v-SNARE homolog (S... 34 0.10
AK223488-1|BAD97208.1| 198|Homo sapiens SNARE protein Ykt6 vari... 34 0.13
AF091079-1|AAC72948.1| 191|Homo sapiens SNARE protein Ykt6 prot... 33 0.23
BC015210-1|AAH15210.1| 292|Homo sapiens C3orf49 protein protein. 31 0.72
AK026417-1|BAB15479.1| 409|Homo sapiens protein ( Homo sapiens ... 31 1.3
Y09420-1|CAA70574.1| 400|Homo sapiens huntingtin interacting pr... 29 3.8
U79734-1|AAC51257.1| 914|Homo sapiens huntingtin interacting pr... 29 3.8
BC139786-1|AAI39787.1| 517|Homo sapiens KRT74 protein protein. 29 3.8
BC110545-1|AAI10546.1| 1037|Homo sapiens huntingtin interacting ... 29 3.8
BC063578-1|AAH63578.1| 584|Homo sapiens SRCAP protein protein. 29 3.8
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 29 3.8
AF365404-1|AAL87037.1| 1030|Homo sapiens huntingtin-interacting ... 29 3.8
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 29 3.8
AF052288-1|AAC33564.1| 995|Homo sapiens huntingtin interacting ... 29 3.8
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 29 3.8
AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens ... 28 6.7
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein. 28 8.8
J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplak... 28 8.8
AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein. 28 8.8
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein. 28 8.8
AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of r... 28 8.8
AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of r... 28 8.8
AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor co-rep... 28 8.8
>M36205-1|AAA60604.1| 116|Homo sapiens SYB2 protein.
Length = 116
Score = 122 bits (293), Expect = 4e-28
Identities = 60/82 (73%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 4 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA 60
+GG AP S++RL QTQA+VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGAS 75
Query: 61 QFEQQAGKLKRKYWWQNLKMML 82
QFE A KLKRKYWW+NLKMM+
Sbjct: 76 QFETSAAKLKRKYWWKNLKMMI 97
>BC033870-1|AAH33870.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 122 bits (293), Expect = 4e-28
Identities = 60/82 (73%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 4 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA 60
+GG AP S++RL QTQA+VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGAS 75
Query: 61 QFEQQAGKLKRKYWWQNLKMML 82
QFE A KLKRKYWW+NLKMM+
Sbjct: 76 QFETSAAKLKRKYWWKNLKMMI 97
>BC019608-1|AAH19608.1| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 122 bits (293), Expect = 4e-28
Identities = 60/82 (73%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 4 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA 60
+GG AP S++RL QTQA+VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGAS 75
Query: 61 QFEQQAGKLKRKYWWQNLKMML 82
QFE A KLKRKYWW+NLKMM+
Sbjct: 76 QFETSAAKLKRKYWWKNLKMMI 97
>BC002737-1|AAH02737.3| 116|Homo sapiens vesicle-associated
membrane protein 2 (synaptobrevin 2) protein.
Length = 116
Score = 122 bits (293), Expect = 4e-28
Identities = 60/82 (73%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 4 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA 60
+GG AP S++RL QTQA+VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGAS 75
Query: 61 QFEQQAGKLKRKYWWQNLKMML 82
QFE A KLKRKYWW+NLKMM+
Sbjct: 76 QFETSAAKLKRKYWWKNLKMMI 97
>AJ225044-1|CAA12385.1| 116|Homo sapiens vesicle associated
membrane protein 2 protein.
Length = 116
Score = 122 bits (293), Expect = 4e-28
Identities = 60/82 (73%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 4 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA 60
+GG AP S++RL QTQA+VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGAS 75
Query: 61 QFEQQAGKLKRKYWWQNLKMML 82
QFE A KLKRKYWW+NLKMM+
Sbjct: 76 QFETSAAKLKRKYWWKNLKMMI 97
>AF135372-1|AAF15551.1| 116|Homo sapiens synaptobrevin 2 protein.
Length = 116
Score = 122 bits (293), Expect = 4e-28
Identities = 60/82 (73%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 4 QGGSSAPR---VSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAA 60
+GG AP S++RL QTQA+VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+
Sbjct: 16 EGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGAS 75
Query: 61 QFEQQAGKLKRKYWWQNLKMML 82
QFE A KLKRKYWW+NLKMM+
Sbjct: 76 QFETSAAKLKRKYWWKNLKMMI 97
>Z48924-1|CAA88760.1| 118|Homo sapiens Vamp1 protein.
Length = 118
Score = 115 bits (276), Expect = 4e-26
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Query: 5 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQ 61
GG P S++RL QTQA+V+EVV I+RVNV+KVLERDQKLSELD+RADALQ GA+Q
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 78
Query: 62 FEQQAGKLKRKYWWQNLKMML 82
FE A KLKRKYWW+N KMM+
Sbjct: 79 FESSAAKLKRKYWWKNCKMMI 99
>M36200-1|AAA60603.1| 118|Homo sapiens SYB1 protein.
Length = 118
Score = 115 bits (276), Expect = 4e-26
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Query: 5 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQ 61
GG P S++RL QTQA+V+EVV I+RVNV+KVLERDQKLSELD+RADALQ GA+Q
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 78
Query: 62 FEQQAGKLKRKYWWQNLKMML 82
FE A KLKRKYWW+N KMM+
Sbjct: 79 FESSAAKLKRKYWWKNCKMMI 99
>CR542231-1|CAG47027.1| 116|Homo sapiens VAMP1 protein.
Length = 116
Score = 115 bits (276), Expect = 4e-26
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Query: 5 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQ 61
GG P S++RL QTQA+V+EVV I+RVNV+KVLERDQKLSELD+RADALQ GA+Q
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 78
Query: 62 FEQQAGKLKRKYWWQNLKMML 82
FE A KLKRKYWW+N KMM+
Sbjct: 79 FESSAAKLKRKYWWKNCKMMI 99
>CR542214-1|CAG47010.1| 116|Homo sapiens VAMP1 protein.
Length = 116
Score = 115 bits (276), Expect = 4e-26
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Query: 5 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQ 61
GG P S++RL QTQA+V+EVV I+RVNV+KVLERDQKLSELD+RADALQ GA+Q
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 78
Query: 62 FEQQAGKLKRKYWWQNLKMML 82
FE A KLKRKYWW+N KMM+
Sbjct: 79 FESSAAKLKRKYWWKNCKMMI 99
>BC023286-1|AAH23286.1| 117|Homo sapiens vesicle-associated
membrane protein 1 (synaptobrevin 1) protein.
Length = 117
Score = 115 bits (276), Expect = 4e-26
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Query: 5 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQ 61
GG P S++RL QTQA+V+EVV I+RVNV+KVLERDQKLSELD+RADALQ GA+Q
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 78
Query: 62 FEQQAGKLKRKYWWQNLKMML 82
FE A KLKRKYWW+N KMM+
Sbjct: 79 FESSAAKLKRKYWWKNCKMMI 99
>AF060538-1|AAC28336.1| 116|Homo sapiens vesicle associated
membrane protein-1B protein.
Length = 116
Score = 115 bits (276), Expect = 4e-26
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 3/81 (3%)
Query: 5 GGSSAP---RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQ 61
GG P S++RL QTQA+V+EVV I+RVNV+KVLERDQKLSELD+RADALQ GA+Q
Sbjct: 19 GGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 78
Query: 62 FEQQAGKLKRKYWWQNLKMML 82
FE A KLKRKYWW+N KMM+
Sbjct: 79 FESSAAKLKRKYWWKNCKMMI 99
>Z98884-2|CAB63146.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 114 bits (274), Expect = 8e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N KM
Sbjct: 64 AAKLKRKYWWKNCKM 78
>U64520-1|AAB05814.1| 100|Homo sapiens synaptobrevin-3 protein.
Length = 100
Score = 114 bits (274), Expect = 8e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N KM
Sbjct: 64 AAKLKRKYWWKNCKM 78
>CR542154-1|CAG46951.1| 100|Homo sapiens VAMP3 protein.
Length = 100
Score = 114 bits (274), Expect = 8e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N KM
Sbjct: 64 AAKLKRKYWWKNCKM 78
>CR542145-1|CAG46942.1| 100|Homo sapiens VAMP3 protein.
Length = 100
Score = 114 bits (274), Expect = 8e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N KM
Sbjct: 64 AAKLKRKYWWKNCKM 78
>BT007327-1|AAP35991.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 114 bits (274), Expect = 8e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N KM
Sbjct: 64 AAKLKRKYWWKNCKM 78
>BC007050-1|AAH07050.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 114 bits (274), Expect = 8e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N KM
Sbjct: 64 AAKLKRKYWWKNCKM 78
>BC003570-1|AAH03570.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 114 bits (274), Expect = 8e-26
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N KM
Sbjct: 64 AAKLKRKYWWKNCKM 78
>BC005941-1|AAH05941.1| 100|Homo sapiens vesicle-associated
membrane protein 3 (cellubrevin) protein.
Length = 100
Score = 112 bits (270), Expect = 2e-25
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
G +A S++RL QTQ +VDEVV IMRVNV+KVLERDQKLSELD+RADALQ GA+QFE
Sbjct: 4 GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
Query: 66 AGKLKRKYWWQNLKM 80
A KLKRKYWW+N +M
Sbjct: 64 AAKLKRKYWWKNCEM 78
>Z98751-4|CAI21808.1| 141|Homo sapiens vesicle-associated membrane
protein 4 protein.
Length = 141
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M+ N+ KV+ER ++L EL +++++L A F
Sbjct: 40 GPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFS 99
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 100 NRSKQLRRQMWWRGCKI 116
>Z98751-3|CAM28272.1| 140|Homo sapiens vesicle-associated membrane
protein 4 protein.
Length = 140
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M+ N+ KV+ER ++L EL +++++L A F
Sbjct: 39 GPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFS 98
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 99 NRSKQLRRQMWWRGCKI 115
>CR457011-1|CAG33292.1| 141|Homo sapiens VAMP4 protein.
Length = 141
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M+ N+ KV+ER ++L EL +++++L A F
Sbjct: 40 GPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFS 99
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 100 NRSKQLRRQMWWRGCKI 116
>BC031264-1|AAH31264.1| 141|Homo sapiens VAMP4 protein protein.
Length = 141
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M+ N+ KV+ER ++L EL +++++L A F
Sbjct: 40 GPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFS 99
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 100 NRSKQLRRQMWWRGCKI 116
>BC007019-1|AAH07019.1| 140|Homo sapiens vesicle-associated
membrane protein 4 protein.
Length = 140
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M+ N+ KV+ER ++L EL +++++L A F
Sbjct: 39 GPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFS 98
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 99 NRSKQLRRQMWWRGCKI 115
>BC005974-1|AAH05974.1| 141|Homo sapiens VAMP4 protein protein.
Length = 141
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M+ N+ KV+ER ++L EL +++++L A F
Sbjct: 40 GPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFS 99
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 100 NRSKQLRRQMWWRGCKI 116
>AL035296-1|CAA22896.1| 141|Homo sapiens hypothetical protein
protein.
Length = 141
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M+ N+ KV+ER ++L EL +++++L A F
Sbjct: 40 GPSGPRFGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFS 99
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 100 NRSKQLRRQMWWRGCKI 116
>AF044310-1|AAC24032.1| 141|Homo sapiens VAMP 4 protein.
Length = 141
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 6 GSSAPRVSDK--RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE 63
G S PR + ++ Q +VDEV+ +M N+ KV+ER ++L EL +++++L A F
Sbjct: 40 GPSGPRFGPRNDKIKHVQNQVDEVIDVMPENITKVIERGERLDELQDKSESLSDNATAFS 99
Query: 64 QQAGKLKRKYWWQNLKM 80
++ +L+R+ WW+ K+
Sbjct: 100 NRSKQLRRQMWWRGCKI 116
>CR456995-1|CAG33276.1| 100|Homo sapiens VAMP5 protein.
Length = 100
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
R+ Q++V+ V IM NVE++L R + L L N+ + L+ + F+ + K+ RK+WW
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 76 QNLKMML 82
+N+KM++
Sbjct: 72 KNVKMIV 78
>BT006700-1|AAP35346.1| 100|Homo sapiens vesicle-associated
membrane protein 8 (endobrevin) protein.
Length = 100
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
R+ Q++V+ V IM NVE++L R + L L N+ + L+ + F+ + K+ RK+WW
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 76 QNLKMML 82
+N+KM++
Sbjct: 72 KNVKMIV 78
>BC001634-1|AAH01634.1| 100|Homo sapiens vesicle-associated
membrane protein 8 (endobrevin) protein.
Length = 100
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
R+ Q++V+ V IM NVE++L R + L L N+ + L+ + F+ + K+ RK+WW
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 76 QNLKMML 82
+N+KM++
Sbjct: 72 KNVKMIV 78
>AC016753-3|AAY24341.1| 100|Homo sapiens unknown protein.
Length = 100
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
R+ Q++V+ V IM NVE++L R + L L N+ + L+ + F+ + K+ RK+WW
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 76 QNLKMML 82
+N+KM++
Sbjct: 72 KNVKMIV 78
>AF053233-1|AAC08434.1| 100|Homo sapiens endobrevin protein.
Length = 100
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 21 QAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
Q++V+ V IM NVE++L R + L L N+ + L+ + F+ + K+ RK+WW+N+KM
Sbjct: 17 QSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNVKM 76
Query: 81 ML 82
++
Sbjct: 77 IV 78
>CR542215-1|CAG47011.1| 116|Homo sapiens VAMP5 protein.
Length = 116
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 17 LAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQ 76
L + Q + +EV IMR N KVLER KL+EL R+D L ++ F + L +K W+
Sbjct: 6 LERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWE 65
Query: 77 NLK 79
N++
Sbjct: 66 NIR 68
>BC017891-1|AAH17891.1| 116|Homo sapiens vesicle-associated
membrane protein 5 (myobrevin) protein.
Length = 116
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 17 LAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQ 76
L + Q + +EV IMR N KVLER KL+EL R+D L ++ F + L +K W+
Sbjct: 6 LERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWE 65
Query: 77 NLK 79
N++
Sbjct: 66 NIR 68
>AF054825-1|AAC97473.1| 116|Homo sapiens VAMP5 protein.
Length = 116
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 17 LAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQ 76
L + Q + +EV IMR N KVLER KL+EL R+D L ++ F + L +K W+
Sbjct: 6 LERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWE 65
Query: 77 NLK 79
N++
Sbjct: 66 NIR 68
>AC016753-4|AAY24342.1| 116|Homo sapiens unknown protein.
Length = 116
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 17 LAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQ 76
L + Q + +EV IMR N KVLER KL+EL R+D L ++ F + L +K W+
Sbjct: 6 LERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWE 65
Query: 77 NLK 79
N++
Sbjct: 66 NIR 68
>X92396-1|CAA63133.1| 220|Homo sapiens ORF protein.
Length = 220
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
++ +TQA+VDE+ GIM N++ V +R ++L L ++ + L + F+ + L R
Sbjct: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
Query: 76 QNLKMML 82
+NLK+ +
Sbjct: 185 KNLKLTI 191
>BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1
protein.
Length = 220
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
++ +TQA+VDE+ GIM N++ V +R ++L L ++ + L + F+ + L R
Sbjct: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
Query: 76 QNLKMML 82
+NLK+ +
Sbjct: 185 KNLKLTI 191
>AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1
variant protein.
Length = 220
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
++ +TQA+VDE+ GIM N++ V +R ++L L ++ + L + F+ + L R
Sbjct: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
Query: 76 QNLKMML 82
+NLK+ +
Sbjct: 185 KNLKLTI 191
>AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAMP
(Ti-VAMP) protein.
Length = 179
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
++ +TQA+VDE+ GIM N++ V +R ++L L ++ + L + F+ + L R
Sbjct: 84 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 143
Query: 76 QNLKMML 82
+NLK+ +
Sbjct: 144 KNLKLTI 150
>AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1
protein protein.
Length = 220
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 75
++ +TQA+VDE+ GIM N++ V +R ++L L ++ + L + F+ + L R
Sbjct: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184
Query: 76 QNLKMML 82
+NLK+ +
Sbjct: 185 KNLKLTI 191
>BC001364-1|AAH01364.1| 215|Homo sapiens SEC22B protein protein.
Length = 215
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+ L ++ +V IM N+E+VL+R + LS LD++A+ L + ++ Q A L +
Sbjct: 133 RNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST 192
Query: 75 WQNL 78
+ L
Sbjct: 193 YAKL 196
>U95735-1|AAB81131.1| 198|Homo sapiens SNARE protein Ykt6 protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGK 68
PR +D + + QA++DE I+ +E +LER +KL +L ++++ L + F + A K
Sbjct: 133 PREADP-MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
>CR542008-1|CAG46805.1| 198|Homo sapiens YKT6 protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGK 68
PR +D + + QA++DE I+ +E +LER +KL +L ++++ L + F + A K
Sbjct: 133 PREADP-MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
>CR456989-1|CAG33270.1| 198|Homo sapiens YKT6 protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGK 68
PR +D + + QA++DE I+ +E +LER +KL +L ++++ L + F + A K
Sbjct: 133 PREADP-MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
>BT007078-1|AAP35741.1| 198|Homo sapiens SNARE protein Ykt6
protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGK 68
PR +D + + QA++DE I+ +E +LER +KL +L ++++ L + F + A K
Sbjct: 133 PREADP-MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
>BC007319-1|AAH07319.1| 198|Homo sapiens YKT6 v-SNARE homolog (S.
cerevisiae) protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGK 68
PR +D + + QA++DE I+ +E +LER +KL +L ++++ L + F + A K
Sbjct: 133 PREADP-MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
>AK223488-1|BAD97208.1| 198|Homo sapiens SNARE protein Ykt6 variant
protein.
Length = 198
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGK 68
PR +D + + QA++DE I+ +E +LER +KL +L ++++ L + F + A K
Sbjct: 133 PREADL-MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
>AF091079-1|AAC72948.1| 191|Homo sapiens SNARE protein Ykt6
protein.
Length = 191
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQA 66
PR +D + + QA++DE I+ +E +LER +KL +L ++++ L + F + A
Sbjct: 133 PREADP-MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTA 188
>BC015210-1|AAH15210.1| 292|Homo sapiens C3orf49 protein protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 2 EEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVL-ERDQKLSELDNRADALQHGAA 60
+++G + R SD + + Q +VD+++ + K+L +R +L + + D + +
Sbjct: 207 KKRGMENILRKSDLTVGKLQMQVDDLIETVTDKSMKLLAQRHAELQQCEFLGDEILQSSK 266
Query: 61 QFEQQAGKLKRKYWWQNL 78
QF++ + + RKY +N+
Sbjct: 267 QFQRISKRTMRKYKLKNM 284
>AK026417-1|BAB15479.1| 409|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22764 fis, clone KAIA1006. ).
Length = 409
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 6 GSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQ 65
GS AP ++ +L + +++ + G N E++ + +K + R DA Q+ + EQ
Sbjct: 337 GSKAPSNAEAKLLEGKSR--RIAGYTGSNAEQIPDGKEKSDVI--RKDAKQNQLEKAEQG 392
Query: 66 AGKLKRKYWWQNL 78
+ K K W +NL
Sbjct: 393 LQRKKSKEWLRNL 405
>Y09420-1|CAA70574.1| 400|Homo sapiens huntingtin interacting
protein protein.
Length = 400
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+ LA +Q ++ + G + + + + +EL+ D+L GAA E++ L+++
Sbjct: 296 QELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSLVSGAAHREEELSALRKELQ 355
Query: 75 WQNLKM 80
LK+
Sbjct: 356 DTQLKL 361
>U79734-1|AAC51257.1| 914|Homo sapiens huntingtin interacting
protein 1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+ LA +Q ++ + G + + + + +EL+ D+L GAA E++ L+++
Sbjct: 417 QELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSLVSGAAHREEELSALRKELQ 476
Query: 75 WQNLKM 80
LK+
Sbjct: 477 DTQLKL 482
>BC139786-1|AAI39787.1| 517|Homo sapiens KRT74 protein protein.
Length = 517
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+ LA +Q ++ + G + + + + +EL+ D+L GAA E++ L+++
Sbjct: 242 QELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSLVSGAAHREEELSALRKELQ 301
Query: 75 WQNLKM 80
LK+
Sbjct: 302 DTQLKL 307
>BC110545-1|AAI10546.1| 1037|Homo sapiens huntingtin interacting
protein 1 protein.
Length = 1037
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+ LA +Q ++ + G + + + + +EL+ D+L GAA E++ L+++
Sbjct: 540 QELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSLVSGAAHREEELSALRKELQ 599
Query: 75 WQNLKM 80
LK+
Sbjct: 600 DTQLKL 605
>BC063578-1|AAH63578.1| 584|Homo sapiens SRCAP protein protein.
Length = 584
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 2 EEQGGSSAPRVSDKRL---AQTQAKVDEVVGIMRVNVEKVLERDQKLSELD 49
EE GSSA S+ AQ+Q++ DE VE +L RD++ SE D
Sbjct: 515 EETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVEYLLARDEEQSEAD 565
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens
cDNA FLJ46149 fis, clone TESTI4000621, moderately
similar to Homo sapiens Snf2-related CBP activator
protein (SRCAP). ).
Length = 2427
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 2 EEQGGSSAPRVSDKRL---AQTQAKVDEVVGIMRVNVEKVLERDQKLSELD 49
EE GSSA S+ AQ+Q++ DE VE +L RD++ SE D
Sbjct: 515 EETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVEYLLARDEEQSEAD 565
>AF365404-1|AAL87037.1| 1030|Homo sapiens huntingtin-interacting
protein 1 protein.
Length = 1030
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+ LA +Q ++ + G + + + + +EL+ D+L GAA E++ L+++
Sbjct: 533 QELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSLVSGAAHREEELSALRKELQ 592
Query: 75 WQNLKM 80
LK+
Sbjct: 593 DTQLKL 598
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 2 EEQGGSSAPRVSDKRL---AQTQAKVDEVVGIMRVNVEKVLERDQKLSELD 49
EE GSSA S+ AQ+Q++ DE VE +L RD++ SE D
Sbjct: 318 EETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVEYLLARDEEQSEAD 368
>AF052288-1|AAC33564.1| 995|Homo sapiens huntingtin interacting
protein 1 protein.
Length = 995
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+ LA +Q ++ + G + + + + +EL+ D+L GAA E++ L+++
Sbjct: 498 QELATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSLVSGAAHREEELSALRKELQ 557
Query: 75 WQNLKM 80
LK+
Sbjct: 558 DTQLKL 563
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 2 EEQGGSSAPRVSDKRL---AQTQAKVDEVVGIMRVNVEKVLERDQKLSELD 49
EE GSSA S+ AQ+Q++ DE VE +L RD++ SE D
Sbjct: 496 EETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVEYLLARDEEQSEAD 546
>AK097517-1|BAC05084.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ40198 fis, clone TESTI2019975, weakly similar to
TRICHOHYALIN. ).
Length = 621
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 11 RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 70
R ++++ + + K+ E +R EK+ E+ +K+ E + + + + E+ + +
Sbjct: 506 REQEEKMWRQEEKIREQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQE 565
Query: 71 RKYWWQNLKM 80
K W Q KM
Sbjct: 566 EKMWEQEEKM 575
>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
Length = 2871
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 3 EQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
++ SSA +K Q Q + RV+ E+ + +DQ ++ N LQ +
Sbjct: 1515 QKANSSATETINKLKVQEQELTRLRIDYERVSQERTV-KDQDITRFQNSLKELQLQKQKV 1573
Query: 63 EQQAGKLKR 71
E++ +LKR
Sbjct: 1574 EEELNRLKR 1582
>J05211-1|AAA35766.1| 1752|Homo sapiens protein ( Human desmoplakin
mRNA, 3' end. ).
Length = 1752
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 3 EQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
++ SSA +K Q Q + RV+ E+ + +DQ ++ N LQ +
Sbjct: 396 QKANSSATETINKLKVQEQELTRLRIDYERVSQERTV-KDQDITRFQNSLKELQLQKQKV 454
Query: 63 EQQAGKLKR 71
E++ +LKR
Sbjct: 455 EEELNRLKR 463
>AY965853-1|AAX77219.1| 2461|Homo sapiens SMRTE-tau protein.
Length = 2461
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSE 47
PR+S + L Q +VD + ++ + K+ ++ Q+L E
Sbjct: 165 PRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEE 202
>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
Length = 2871
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 3 EQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
++ SSA +K Q Q + RV+ E+ + +DQ ++ N LQ +
Sbjct: 1515 QKANSSATETINKLKVQEQELTRLRIDYERVSQERTV-KDQDITRFQNSLKELQLQKQKV 1573
Query: 63 EQQAGKLKR 71
E++ +LKR
Sbjct: 1574 EEELNRLKR 1582
>AF125672-1|AAD22973.1| 2507|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor extended
isofo protein.
Length = 2507
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSE 47
PR+S + L Q +VD + ++ + K+ ++ Q+L E
Sbjct: 165 PRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEE 202
>AF113003-1|AAD20946.1| 2517|Homo sapiens silencing mediator of
retinoic acid and thyroid hormone receptor alpha
protein.
Length = 2517
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSE 47
PR+S + L Q +VD + ++ + K+ ++ Q+L E
Sbjct: 165 PRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEE 202
>AB209089-1|BAD92326.1| 1469|Homo sapiens nuclear receptor
co-repressor 2 variant protein.
Length = 1469
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSE 47
PR+S + L Q +VD + ++ + K+ ++ Q+L E
Sbjct: 183 PRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEE 220
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.127 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,826,745
Number of Sequences: 224733
Number of extensions: 270155
Number of successful extensions: 1217
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1145
Number of HSP's gapped (non-prelim): 81
length of query: 120
length of database: 73,234,838
effective HSP length: 81
effective length of query: 39
effective length of database: 55,031,465
effective search space: 2146227135
effective search space used: 2146227135
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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