Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000943-TA|BGIBMGA000943-PA|IPR001388|Synaptobrevin
(120 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin... 128 8e-31
AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein. 128 8e-31
AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein. 128 8e-31
Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical pr... 91 3e-19
AF239889-1|AAF45301.1| 118|Caenorhabditis elegans synaptobrevin... 91 3e-19
AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical... 57 4e-09
Z83246-5|CAE18062.1| 102|Caenorhabditis elegans Hypothetical pr... 50 4e-07
Z77666-14|CAE17894.1| 102|Caenorhabditis elegans Hypothetical p... 50 4e-07
L10990-1|AAB59178.1| 102|Caenorhabditis elegans Synaptobrevin r... 50 4e-07
Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical pr... 47 3e-06
Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical pr... 46 5e-06
Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical pr... 46 7e-06
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 34 0.024
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 33 0.041
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 33 0.072
Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical pr... 31 0.17
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 31 0.29
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 30 0.51
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 29 0.88
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 28 2.0
X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic int... 28 2.0
U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate fi... 28 2.0
U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate fi... 28 2.0
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 27 2.7
U88165-8|AAK21391.1| 581|Caenorhabditis elegans Hypothetical pr... 27 2.7
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 27 2.7
Z81096-7|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z81096-6|CAD54150.1| 507|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z81096-5|CAD54149.1| 771|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z78065-11|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 27 3.6
Z78065-9|CAD54156.1| 507|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z78065-8|CAD54155.1| 771|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 27 3.6
Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 27 4.7
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 27 4.7
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 26 6.2
Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 26 8.2
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 26 8.2
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 26 8.2
>AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin
related protein 1 protein.
Length = 109
Score = 128 bits (310), Expect = 8e-31
Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 4 QGGSSA-PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
QGGS PR S+KRL QTQA+VDEVVGIM+VNVEKVLERDQKLS+LD+RADALQ GA+QF
Sbjct: 10 QGGSQGGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQF 69
Query: 63 EQQAGKLKRKYWWQNLKMML 82
E+ A LKRKYWW+N+KMM+
Sbjct: 70 EKSAATLKRKYWWKNIKMMI 89
>AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 128 bits (310), Expect = 8e-31
Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 4 QGGSSA-PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
QGGS PR S+KRL QTQA+VDEVVGIM+VNVEKVLERDQKLS+LD+RADALQ GA+QF
Sbjct: 10 QGGSQGGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQF 69
Query: 63 EQQAGKLKRKYWWQNLKMML 82
E+ A LKRKYWW+N+KMM+
Sbjct: 70 EKSAATLKRKYWWKNIKMMI 89
>AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 128 bits (310), Expect = 8e-31
Identities = 61/80 (76%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 4 QGGSSA-PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
QGGS PR S+KRL QTQA+VDEVVGIM+VNVEKVLERDQKLS+LD+RADALQ GA+QF
Sbjct: 10 QGGSQGGPRPSNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQF 69
Query: 63 EQQAGKLKRKYWWQNLKMML 82
E+ A LKRKYWW+N+KMM+
Sbjct: 70 EKSAATLKRKYWWKNIKMMI 89
>Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical
protein F23H12.1 protein.
Length = 118
Score = 90.6 bits (215), Expect = 3e-19
Identities = 37/68 (54%), Positives = 56/68 (82%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
KR+ QA+V+EV+ +MR NV KV+ERD +L+ LD+RA+ LQ+GA+QF+Q + L++KYW
Sbjct: 32 KRMQMAQAQVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYW 91
Query: 75 WQNLKMML 82
WQN++MM+
Sbjct: 92 WQNIRMMI 99
>AF239889-1|AAF45301.1| 118|Caenorhabditis elegans
synaptobrevin-like protein protein.
Length = 118
Score = 90.6 bits (215), Expect = 3e-19
Identities = 37/68 (54%), Positives = 56/68 (82%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
KR+ QA+V+EV+ +MR NV KV+ERD +L+ LD+RA+ LQ+GA+QF+Q + L++KYW
Sbjct: 32 KRMQMAQAQVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYW 91
Query: 75 WQNLKMML 82
WQN++MM+
Sbjct: 92 WQNIRMMI 99
>AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical
protein Y69A2AR.6 protein.
Length = 245
Score = 56.8 bits (131), Expect = 4e-09
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 3 EQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
+Q + P +R+ + +VD+V +M NVE+++ER ++L ++NR +AL+ A F
Sbjct: 142 KQHNETFPTAQQQRMIDIRRQVDDVRQVMADNVERIMERGERLENMENRTEALRTSATSF 201
Query: 63 EQQAGKLKRKYWWQNLKMML 82
+ A +++R + +NLK L
Sbjct: 202 KSTARRVQRHFCQKNLKWTL 221
>Z83246-5|CAE18062.1| 102|Caenorhabditis elegans Hypothetical
protein ZK795.4 protein.
Length = 102
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 73
D+++ +T+ ++D V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREM 74
Query: 74 WWQ 76
W+
Sbjct: 75 SWK 77
>Z77666-14|CAE17894.1| 102|Caenorhabditis elegans Hypothetical
protein ZK795.4 protein.
Length = 102
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 73
D+++ +T+ ++D V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREM 74
Query: 74 WWQ 76
W+
Sbjct: 75 SWK 77
>L10990-1|AAB59178.1| 102|Caenorhabditis elegans Synaptobrevin
related protein 5 protein.
Length = 102
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 73
D+++ +T+ ++D V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRRELDSVKAIMKENVQKIMERQGKLDDLVERAQRLEEASDVYVKCAVKIKREM 74
Query: 74 WWQ 76
W+
Sbjct: 75 SWK 77
>Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical
protein B0513.9a protein.
Length = 116
Score = 47.2 bits (107), Expect = 3e-06
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 1 MEEQGGSSAPRVSDKRLAQTQA---KVDEVVGIMRVNVEKVLERDQKLSELDNRADALQH 57
M + S+ P +D++ + Q +VD V +M NVE++LER ++L ++ R++ L
Sbjct: 2 MSMENDSNKPSDNDQQKEKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNA 61
Query: 58 GAAQFEQQAGKLKRKYWWQNLK 79
+A F+ A K++RK+ N K
Sbjct: 62 TSANFKFTARKVQRKFCMLNAK 83
>Z81123-3|CAB03366.1| 102|Caenorhabditis elegans Hypothetical
protein T14D7.3 protein.
Length = 102
Score = 46.4 bits (105), Expect = 5e-06
Identities = 21/63 (33%), Positives = 41/63 (65%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKY 73
D+++ +T+ +++ V IM+ NV+K++ER KL +L RA L+ + + + A K+KR+
Sbjct: 15 DQKIMRTRQELNSVKIIMKENVQKIMERQGKLDDLVERAQKLEEASDVYVKCAVKIKREM 74
Query: 74 WWQ 76
W+
Sbjct: 75 SWK 77
>Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical
protein B0513.9b protein.
Length = 113
Score = 46.0 bits (104), Expect = 7e-06
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 74
+++ + +VD V +M NVE++LER ++L ++ R++ L +A F+ A K++RK+
Sbjct: 16 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 75
Query: 75 WQNLK 79
N K
Sbjct: 76 MLNAK 80
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 34.3 bits (75), Expect = 0.024
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 10 PRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKL 69
PR +D + + Q +V+E +M ++ VL+R +KL +L +++ L + F A K+
Sbjct: 136 PREADP-MTRVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSENLSDQSKMFYTSARKM 194
Query: 70 KR 71
+
Sbjct: 195 NK 196
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 33.5 bits (73), Expect = 0.041
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 23 KVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
++ +V IM N+E V+ R + L+ L+NRA L + ++ A L R+
Sbjct: 140 ELQDVTRIMVTNIEDVIHRGEALNILENRASELSGMSKKYRDDAKALNRR 189
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 32.7 bits (71), Expect = 0.072
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 70
S + ++T A V ++ M+ NV+ V K SE N++DA+ H A+ G +K
Sbjct: 510 SVSQFSETLASVKKIPDAMKKNVKNVTLELNKRSESLNQSDAISHSASALRSVFGLVK 567
>Z93380-5|CAB07601.1| 240|Caenorhabditis elegans Hypothetical
protein F28C12.6 protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 9 APRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAG 67
A + S+K + A++ ++ +R +EK+ DQ+ +L R + G A ++++ G
Sbjct: 92 AEKSSEKEVYDEIAEIADITNSIRAAIEKIRNYDQQWKDLFTRIPTEREGMADYKKRLG 150
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/60 (21%), Positives = 33/60 (55%)
Query: 11 RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 70
++ D++L + +AK+ + + +V +LE+D++L + + + F+Q+ +LK
Sbjct: 100 KILDEKLDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFDQELTRLK 159
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 29.9 bits (64), Expect = 0.51
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 11 RVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 70
++ D+ L + +AK+ + + +V +LE+D++L + + + F+Q+ +LK
Sbjct: 100 KILDEELDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFDQELTRLK 159
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 29.1 bits (62), Expect = 0.88
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 16 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLK 70
+ + T A ++++ M+ NV+ V K S+ N++DA+ H A+ G L+
Sbjct: 712 QFSATLASIEKIPDTMKKNVKNVTLELNKWSQSLNQSDAITHSASALRGVFGLLE 766
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical protein
ZK593.5 protein.
Length = 1326
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 12 VSDKRLAQT-QAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFE------- 63
+++ RL T +A+ D+V + + V + +K E D DALQ + E
Sbjct: 1061 MAESRLNSTDKAEGDKVKHLEEKINQMVADHRRKQIEYDESMDALQREMKEVESDNLELK 1120
Query: 64 QQAGKLKRKYWWQNLKMM 81
Q+A K+ ++ W+N++ M
Sbjct: 1121 QRANKISKEALWKNIQSM 1138
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 3 EQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKL----SELDNRADALQHG 58
++G + K + + +A + + M ++EKVLE +QKL +ELD +++ +
Sbjct: 26 KKGLEGQSNLISKLMKKHEANIPFIEDTMATDIEKVLETNQKLQLAFAELDEQSEKINSL 85
Query: 59 AAQFEQQAGKLKR 71
Q + +L +
Sbjct: 86 ETQQHKLVAELSK 98
>X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic
intermediate filamentprotein protein.
Length = 543
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 7 SSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQA 66
S V +++ +A V I ++N E + KLSEL+ R AL+ A + Q
Sbjct: 270 SKISAVESSIVSKNEAAVFRQEEIRKMN-ESITTLRAKLSELEARNSALEREANTLQIQL 328
Query: 67 GKLKRKY 73
G+ +R Y
Sbjct: 329 GEDQRAY 335
>U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate
filament, b protein2, isoform c protein.
Length = 526
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 7 SSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQA 66
S V +++ +A V I ++N E + KLSEL+ R AL+ A + Q
Sbjct: 270 SKISAVESSIVSKNEAAVFRQEEIRKMN-ESITTLRAKLSELEARNSALEREANTLQIQL 328
Query: 67 GKLKRKY 73
G+ +R Y
Sbjct: 329 GEDQRAY 335
>U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate
filament, b protein2, isoform a protein.
Length = 543
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 7 SSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQA 66
S V +++ +A V I ++N E + KLSEL+ R AL+ A + Q
Sbjct: 270 SKISAVESSIVSKNEAAVFRQEEIRKMN-ESITTLRAKLSELEARNSALEREANTLQIQL 328
Query: 67 GKLKRKY 73
G+ +R Y
Sbjct: 329 GEDQRAY 335
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 27 VVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
+V V VE + E+ ++++L + + Q +A+ +QQ + KRK
Sbjct: 857 MVNYREVTVEDLDEKRAQIADLKRQVEESQKSSAKIKQQIEQYKRK 902
>U88165-8|AAK21391.1| 581|Caenorhabditis elegans Hypothetical
protein F54C1.1 protein.
Length = 581
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 23 KVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQF 62
K+DE++ MR N+ + R +KLS++ ++ + G QF
Sbjct: 495 KLDEMMDKMRRNLSRYWTRSEKLSKMLSQLRSFHTGYQQF 534
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 27 VVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 72
+V V VE + E+ ++++L + + Q +A+ +QQ + KRK
Sbjct: 857 MVNYREVTVEDLDEKRAQIADLKRQVEESQKSSAKIKQQIEQYKRK 902
>Z81096-7|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 389 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 438
>Z81096-6|CAD54150.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 205 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 254
>Z81096-5|CAD54149.1| 771|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 771
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 469 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 518
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 387 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 436
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 445 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 494
>Z78065-11|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 389 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 438
>Z78065-9|CAD54156.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 205 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 254
>Z78065-8|CAD54155.1| 771|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 771
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 469 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 518
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 387 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 436
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 445 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 494
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 32 RVNVEKVLERDQKL-SELDNRADALQHGAAQFEQQAGKLKRKYWWQNLKM 80
R ++ + +++ Q+L +ELD A+Q+G EQ+ +L+ K W Q ++
Sbjct: 245 RDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQEREL 294
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 17 LAQTQAKVDEVVGIMRVNVEKVLE----RDQKLSELDNRADALQHGAAQFEQQAGKLKR 71
L +T + +EK+ E +D KL EL+N A+AL+ Q ++Q K+
Sbjct: 79 LQRTDEAAKQSAAAQEEQIEKLAEQGRKKDDKLKELENNAEALK---TQLQEQTNDAKK 134
>Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 34 NVEK-VLERDQKLSELDNRADALQHGAAQFEQQAGKLKR 71
N EK V+E Q L EL + Q G A+ + G L+R
Sbjct: 29 NYEKGVMENPQNLPELQEHNEICQSGIARMAIKTGDLRR 67
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 34 NVEK-VLERDQKLSELDNRADALQHGAAQFEQQAGKLKR 71
N EK V+E Q L EL + Q G A+ + G L+R
Sbjct: 836 NYEKGVMENPQNLPELQEHNEICQSGIARMAIKTGDLRR 874
>Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 34 NVEK-VLERDQKLSELDNRADALQHGAAQFEQQAGKLKR 71
N EK V+E Q L EL + Q G A+ + G L+R
Sbjct: 29 NYEKGVMENPQNLPELQEHNEICQSGIARMAIKTGDLRR 67
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 34 NVEK-VLERDQKLSELDNRADALQHGAAQFEQQAGKLKR 71
N EK V+E Q L EL + Q G A+ + G L+R
Sbjct: 836 NYEKGVMENPQNLPELQEHNEICQSGIARMAIKTGDLRR 874
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 34 NVEK-VLERDQKLSELDNRADALQHGAAQFEQQAGKLKR 71
N EK V+E Q L EL + Q G A+ + G L+R
Sbjct: 836 NYEKGVMENPQNLPELQEHNEICQSGIARMAIKTGDLRR 874
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKL---SELDNRA 52
K L QT+ DE++ + + + + RD+ L SELDN +
Sbjct: 1891 KHLQQTRKMADEILRLKQQSAQLATARDELLRGISELDNNS 1931
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 15 KRLAQTQAKVDEVVGIMRVNVEKVLERDQKL---SELDNRA 52
K L QT+ DE++ + + + + RD+ L SELDN +
Sbjct: 1891 KHLQQTRKMADEILRLKQQSAQLATARDELLRGISELDNNS 1931
>Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical
protein C27D8.3b protein.
Length = 916
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLER 41
D + AQ ++ +GI+R ++E++LE+
Sbjct: 31 DPQTAQEVTNIESNIGILRNHIEQILEK 58
>Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical
protein C27D8.3a protein.
Length = 982
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 14 DKRLAQTQAKVDEVVGIMRVNVEKVLER 41
D + AQ ++ +GI+R ++E++LE+
Sbjct: 97 DPQTAQEVTNIESNIGILRNHIEQILEK 124
>Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 13 SDKRLAQTQAKVDEVVGIMRVNVEKVLER--------DQKLSELDNRADALQHGAAQFEQ 64
++K A Q D+ V ++ N++ +++ +K S+L+NR + AQFEQ
Sbjct: 209 TEKMDANIQTDKDDHVNVVNANLQIEVDQLHSEIEVIGKKKSDLENRLFDYEKLKAQFEQ 268
Query: 65 QAGKLK 70
KL+
Sbjct: 269 DENKLR 274
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 13 SDKRLAQTQAKVDEVVGIMRVNVEKVLER--------DQKLSELDNRADALQHGAAQFEQ 64
++K A Q D+ V ++ N++ +++ +K S+L+NR + AQFEQ
Sbjct: 209 TEKMDANIQTDKDDHVNVVNANLQIEVDQLHSEIEVIGKKKSDLENRLFDYEKLKAQFEQ 268
Query: 65 QAGKLK 70
KL+
Sbjct: 269 DENKLR 274
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 7 SSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADA 54
S+AP ++ + +T KVDE+ + + KV +R + LS NR A
Sbjct: 143 SAAPFITSLKRRETFTKVDEITKELNARIGKV-KRTESLSIGMNRHHA 189
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 1 MEEQGGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRAD 53
++E + +P + K+ +QT +++V ++ + K + +K+SEL+ + D
Sbjct: 425 LDESSSTKSP-IDCKKCSQTLQTIEDVKKELKTSQNKENKMRKKVSELEKKLD 476
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.127 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,947,224
Number of Sequences: 27539
Number of extensions: 54865
Number of successful extensions: 282
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 252
Number of HSP's gapped (non-prelim): 56
length of query: 120
length of database: 12,573,161
effective HSP length: 73
effective length of query: 47
effective length of database: 10,562,814
effective search space: 496452258
effective search space used: 496452258
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
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