GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000941-TA|BGIBMGA000941-PA|IPR001627|Semaphorin/CD100
antigen, IPR009057|Homeodomain-like
         (286 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   2.5  
Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related prot...    24   5.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   5.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.7  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   7.6  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 235 QSVHQIPGDTSRFYAAFTTGASDGLIGSA 263
           Q   Q P  +S+  A  T G S+GL+GS+
Sbjct: 289 QQPSQQPQPSSQSNAQLTNGGSNGLLGSS 317


>Z22930-2|CAA80514.1|  274|Anopheles gambiae trypsin-related
           protease protein.
          Length = 274

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 197 CKQDNGGKHILSQNWVTYLKARLNCSIPGEFPFYFDEIQSV 237
           C+QD+GG  +     +  +     C++ G +P  +  + SV
Sbjct: 225 CRQDSGGPFVAEGKLIGVISWGHECALAG-YPGVYPRVASV 264


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 148 TLKYDSKWLDKTNFVGSFD 166
           TL  D++W  +   VGSFD
Sbjct: 147 TLNQDNEWAGRLQRVGSFD 165


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 148 TLKYDSKWLDKTNFVGSFD 166
           TL  D++W  +   VGSFD
Sbjct: 147 TLNQDNEWAGRLQRVGSFD 165


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 211 WVTYLKARLNCSIPGEFPFYFDEIQSV-HQIPGDT 244
           W  + K RL  +IP +    FD +Q V  +IP +T
Sbjct: 192 WAIF-KKRLGKNIPEDLDHLFDHMQEVWSKIPPET 225


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.137    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,909
Number of Sequences: 2123
Number of extensions: 14821
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 5
length of query: 286
length of database: 516,269
effective HSP length: 63
effective length of query: 223
effective length of database: 382,520
effective search space: 85301960
effective search space used: 85301960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)