Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000941-TA|BGIBMGA000941-PA|IPR001627|Semaphorin/CD100
antigen, IPR009057|Homeodomain-like
(286 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.33
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.33
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 15 LLEASNVARCVSKGKSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
LL + N +SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 62 LLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 114
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 15 LLEASNVARCVSKGKSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
LL + N +SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 62 LLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 114
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 6 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 29 KSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
+SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 8 ESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 46
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 29 KSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
+SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 8 ESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 46
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 4 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 29 KSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
+SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 8 ESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 46
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 29 KSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
+SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 8 ESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 46
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 29 KSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
+SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 8 ESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 46
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 1 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 29 KSEPFECRNHIRVLQPLGDGERLYVCGTNAHSPKDWVVY 67
+SEP E + I + Q + E+ + TNA +WV Y
Sbjct: 8 ESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDY 46
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 117 TNAEFTKADPVIFRNDLFDFRTGQKKFNFKRTLKYDSKWLDKTNFVGSFDVGEYV 171
T +E + ++ ND +T +F R WLD+ +G + E V
Sbjct: 201 TESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSLGLSWLDQLTNLGFLGMKESV 255
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 117 TNAEFTKADPVIFRNDLFDFRTGQKKFNFKRTLKYDSKWLDKTNFVGSFDVGEYV 171
T +E + ++ ND +T +F R WLD+ +G + E V
Sbjct: 239 TESEQHRLQNRLYTNDSTSSKTDDDSIDFDRMNSLGLSWLDQLTNLGFLGMKESV 293
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.137 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,101
Number of Sequences: 429
Number of extensions: 4012
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 10
length of query: 286
length of database: 140,377
effective HSP length: 57
effective length of query: 229
effective length of database: 115,924
effective search space: 26546596
effective search space used: 26546596
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)
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