GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000940-TA|BGIBMGA000940-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
         (295 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    29   0.21 
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    27   0.84 
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    25   1.9  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    25   1.9  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 100  TPTKKGYRPIYCQILDSDPNKFVYQDAVRAFTMIVDLWQYEEGTVPGIVIILNMKDVSLG 159
            TP +  +  ++ Q+LD + N   + D+V       D +  E  +V   + I+  KD+  G
Sbjct: 1037 TPPRASFVEVFVQVLDENDNNPYFVDSVN------DYYVSENASVGAEIAIILAKDLDSG 1090

Query: 160  HISQIDLIV 168
               +I  I+
Sbjct: 1091 DFGRITYIL 1099


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 171 QFFYYLQESMIVKLKEFHFINAPSHMDKLMMMIRPLMKDTFLNVIK 216
           + FYY+ + +I +     F N  S +  L  +  PL +  F  +++
Sbjct: 232 ELFYYMHQQLIARYNVDRFCNRLSRVRPLTSLREPLPEGYFPKIVR 277


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 14  KHVNIRQEMVENLREWIRKQPHL 36
           +HV +R+   E    W++KQP L
Sbjct: 216 EHVRLRRNAAERHDSWVQKQPLL 238


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 171 QFFYYLQESMIVKLKEFHFINAPSHMDKLMMMIRPLMKDTFLNVIK 216
           + FYY+ + +I +     F N  + +  L  +  PL +  F  +I+
Sbjct: 231 ELFYYMHQQLIARYNVERFCNRLARVRPLTNLREPLPEGYFPKIIR 276


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,561
Number of Sequences: 2123
Number of extensions: 10103
Number of successful extensions: 69
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 4
length of query: 295
length of database: 516,269
effective HSP length: 64
effective length of query: 231
effective length of database: 380,397
effective search space: 87871707
effective search space used: 87871707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)