GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000939-TA|BGIBMGA000939-PA|undefined
         (287 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068989-1|AAH68989.1|  422|Homo sapiens chromosome 14 open read...    60   9e-09
AK058044-1|BAB71637.1|  422|Homo sapiens protein ( Homo sapiens ...    60   9e-09
Y16106-1|CAA76073.1|  734|Homo sapiens cGMP-dependant protein ki...    32   2.0  
X94612-1|CAA64318.1|  762|Homo sapiens Type II cGMP-dependent pr...    32   2.0  
D70899-1|BAA18934.1|  762|Homo sapiens cGMP-dependent protein ki...    30   8.1  

>BC068989-1|AAH68989.1|  422|Homo sapiens chromosome 14 open reading
           frame 50 protein.
          Length = 422

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 9/179 (5%)

Query: 92  ERFLRALILCCQYYLQIADEMANRIIELEAKVRTPDCEIIENEYRDNLADLRLLVAKEYC 151
           + FL AL+    +YL+           +   V   + E++ +E    L   +  +A++YC
Sbjct: 150 DNFLMALLYYLSHYLEKNSLEKKPKSYMVGLVEKKEMELVLSE----LEAAQRYLAQKYC 205

Query: 152 TILIGGGETRKFHHMGPQKKRRSLSDKDARLFETLLRMCVQVVWLALGRKSFNQIELEVN 211
            +++G     K HHM   K++ S + KD + FE+    C  V W+   R+   +IE EV 
Sbjct: 206 ILVLGLAVPDK-HHMCCGKEKISDTQKDWKFFESFYTFCTYVAWIVFRRQHLTEIEEEVG 264

Query: 212 RVFKSDIFNTVEHTLKTGYVGKMTKEERSVLFGNCI----RYDKKLNTKSPLTNEVFCS 266
           R+F++++FN      +    G   K    V F   +       K +N +SP+ + +  S
Sbjct: 265 RLFRTNMFNIPRRRREDEESGGEKKRMTFVQFRRMMAKRPAIKKAINMRSPVMSTLLPS 323


>AK058044-1|BAB71637.1|  422|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25315 fis, clone TST00114. ).
          Length = 422

 Score = 60.1 bits (139), Expect = 9e-09
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 9/179 (5%)

Query: 92  ERFLRALILCCQYYLQIADEMANRIIELEAKVRTPDCEIIENEYRDNLADLRLLVAKEYC 151
           + FL AL+    +YL+           +   V   + E++ +E    L   +  +A++YC
Sbjct: 150 DNFLMALLYYLSHYLEKNSLEKKPKSYMVGLVEKKEMELVLSE----LEAAQRYLAQKYC 205

Query: 152 TILIGGGETRKFHHMGPQKKRRSLSDKDARLFETLLRMCVQVVWLALGRKSFNQIELEVN 211
            +++G     K HHM   K++ S + KD + FE+    C  V W+   R+   +IE EV 
Sbjct: 206 ILVLGLAVPDK-HHMCCGKEKISDTQKDWKFFESFYTFCTYVAWIVFRRQHLTEIEEEVG 264

Query: 212 RVFKSDIFNTVEHTLKTGYVGKMTKEERSVLFGNCI----RYDKKLNTKSPLTNEVFCS 266
           R+F++++FN      +    G   K    V F   +       K +N +SP+ + +  S
Sbjct: 265 RLFRTNMFNIPRRRREDEESGGEKKRMTFVQFRRMMAKRPAIKKAINMRSPVMSTLLPS 323


>Y16106-1|CAA76073.1|  734|Homo sapiens cGMP-dependant protein
           kinase protein.
          Length = 734

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 110 DEMANRIIELEAKVRTPDCEIIENEYRDNLADLRLLVAKEYCTI 153
           D + N++ ELE ++R  D EI E EY  +L +LR  ++K+   I
Sbjct: 24  DALRNKVTELERELRRKDAEIQEREY--HLKELREQLSKQTVAI 65


>X94612-1|CAA64318.1|  762|Homo sapiens Type II cGMP-dependent
           protein kinase protein.
          Length = 762

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 110 DEMANRIIELEAKVRTPDCEIIENEYRDNLADLRLLVAKEYCTI 153
           D + N++ ELE ++R  D EI E EY  +L +LR  ++K+   I
Sbjct: 24  DALRNKVTELERELRRKDAEIQEREY--HLKELREQLSKQTVAI 65


>D70899-1|BAA18934.1|  762|Homo sapiens cGMP-dependent protein
           kinase II protein.
          Length = 762

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 110 DEMANRIIELEAKVRTPDCEIIENEYRDNLADLR 143
           D + N++ ELE ++R  D EI E EY  +L +LR
Sbjct: 24  DALRNKVTELERELRRKDAEIQEREY--HLKELR 55


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.140    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,100,754
Number of Sequences: 224733
Number of extensions: 1710941
Number of successful extensions: 3197
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3193
Number of HSP's gapped (non-prelim): 7
length of query: 287
length of database: 73,234,838
effective HSP length: 89
effective length of query: 198
effective length of database: 53,233,601
effective search space: 10540252998
effective search space used: 10540252998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)