Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000938-TA|BGIBMGA000938-PA|IPR006575|RWD,
IPR010541|Protein of unknown function DUF1115,
IPR013881|Pre-mRNA-splicing factor 3, IPR004856|ALG6, ALG8
glycosyltransferase
(537 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 109 1e-24
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 59 1e-09
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 32 0.17
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 32 0.17
SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase |Schizosaccharom... 31 0.40
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 31 0.53
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 30 0.93
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 29 2.2
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 28 2.8
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 28 3.8
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 27 5.0
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 27 5.0
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 27 5.0
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 27 6.6
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 109 bits (261), Expect = 1e-24
Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 3/95 (3%)
Query: 177 PSH-STDFEVHRNWLAITNNVSVEEWYYESTSEWTLDYPPLFAWLEYGLSIVAKY--FDP 233
PS+ STDFEVHRNWLAIT+++ + EWY S SEWTLDYPP FA++E LS +A + FD
Sbjct: 23 PSYRSTDFEVHRNWLAITHSLPISEWYKSSISEWTLDYPPFFAYMECVLSWIAYFFGFDK 82
Query: 234 KMIKIENLNYKSDMAVLFQRLSVIFLDFVYIFSVK 268
M+ NLNY S V+FQR SVI L+ V +F+++
Sbjct: 83 AMLDPYNLNYVSPSTVVFQRGSVIVLELVLLFALR 117
Score = 103 bits (247), Expect = 6e-23
Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 19/230 (8%)
Query: 287 YGINIPKSEASMTGGLVQEYDHSVLPSITPSFTFIMTCLSM-MPALYKMWCLCADRRYRP 345
Y +N S + T GLV E +VLP+I P+ TF + CL + + L K++ R
Sbjct: 287 YALNQGTSINAPTRGLVGESSFAVLPNIPPALTFYI-CLGLQITVLIKLFIKPTWR---- 341
Query: 346 ICFIRCIVVCATCSFMLGWHVHEKAILMIIIPLSFLSVLGDVDGRLFILLSTVGHYSLFP 405
F+ + +C SF+ GWHVHEKAILM+I+P S LS++ F L+ G+ SL P
Sbjct: 342 -VFVGAVTLCGWISFLFGWHVHEKAILMVILPFSILSLIDRRYLEAFRPLAVSGYLSLLP 400
Query: 406 LLYPKDLLSIKIFLLLTHVAIVFGNVPALYTVETKATKKRRRRFMRLPMIGPFESIYIYG 465
LL+ + IK +A+ L T + A +R F ++ YI G
Sbjct: 401 LLFTLNEAPIKYLFTGAWIAM-------LLTFDKCAPVPVKRVF----LLNRVNIAYISG 449
Query: 466 LILLCVYENMLHVAWGLDKTLPFLPLMMTSTYCALGVFYFWIKYYHYFLT 515
+ L +Y +H DK FLPLM+ STY A G+F+ ++ + T
Sbjct: 450 FVPLFIYNCFIHKLVMGDK-FEFLPLMLLSTYAAWGIFWSFVSLLWLYFT 498
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 182 DFEVHRNWLAITNNVSVEEWYYESTSEWTLDYPPLFAWLEYGLSIVAKY-FDPK-MIKIE 239
DFE R+W+ +T + V +WY+ W LDYPPL A++ + I+ Y F+P+ +
Sbjct: 58 DFEAQRHWMELTLHTPVSQWYFRDLQWWGLDYPPLTAYVSWFFGIIGHYFFNPEWFADVT 117
Query: 240 NLNYKSDMAVLFQRLSVIFLDFVYIFSVKSIYFIVWT 276
+ ++S LF R +VI + + Y W+
Sbjct: 118 SRGFESLELKLFMRSTVIASHLLILVPPLMFYSKWWS 154
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 360 FMLGWHVHEKAILMIIIPLSFLSVLGDVDGRLFI-LLSTVGHYSLFPLLYPKDLLSIKIF 418
F+ + VHEK++L+ ++P S L G++ + +I L + + +SL+PLL KD L ++ F
Sbjct: 356 FLFSFQVHEKSVLLPLLPTSILLCHGNITTKPWIALANNLAVFSLWPLL-KKDGLGLQYF 414
Query: 419 LLL 421
L+
Sbjct: 415 TLV 417
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 32.3 bits (70), Expect = 0.17
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 8/220 (3%)
Query: 135 ENDRKFTNFEELQFQSNNNTKFSNMKPNWPVAVLHLEAAAKQP-SHSTDFEVHRNWLAIT 193
E+D N + +NNN +N + +A L L A K DF + L I
Sbjct: 526 EDDNDNDNDNDRDSNNNNNNNNTNTDDDDKLAYLELHEALKLAFLQQYDFSKNVQDLEIM 585
Query: 194 NNVSVEEWYYESTSEWTLDYPPLFAWLEYGLSIVAKYFDPKMIKIENLNYKSDMAVLFQR 253
++ + + TS++ + FA L Y +VA ++I + ++ S + FQ
Sbjct: 586 EFLACMSLHKDGTSKYAYEISACFAPLIYTCRLVAACELQRLIDEKQIDLLSIPS--FQT 643
Query: 254 LSVIFLDFVYIF---SVKSIYFIVWTIFRPFESVTK-YGINIPKSEASMTGGLVQEYDHS 309
I V+ F +++Y +++ + + + G S + L Q +S
Sbjct: 644 AGSIAYAHVFCFITLGQRNLYDVLYETQKVVRDIIRTEGYANTLQGLSPSTVLFQPRSNS 703
Query: 310 VLPSITPSF-TFIMTCLSMMPALYKMWCLCADRRYRPICF 348
+ P I +F + LS + ALY+ + +CF
Sbjct: 704 MYPCIGDAFNNMVRLDLSELTALYEGMFAKVQDLLKELCF 743
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 32.3 bits (70), Expect = 0.17
Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 8/220 (3%)
Query: 135 ENDRKFTNFEELQFQSNNNTKFSNMKPNWPVAVLHLEAAAKQP-SHSTDFEVHRNWLAIT 193
E+D N + +NNN +N + +A L L A K DF + L I
Sbjct: 526 EDDNDNDNDNDRDSNNNNNNNNTNTDDDDKLAYLELHEALKLAFLQQYDFSKNVQDLEIM 585
Query: 194 NNVSVEEWYYESTSEWTLDYPPLFAWLEYGLSIVAKYFDPKMIKIENLNYKSDMAVLFQR 253
++ + + TS++ + FA L Y +VA ++I + ++ S + FQ
Sbjct: 586 EFLACMSLHKDGTSKYAYEISACFAPLIYTCRLVAACELQRLIDEKQIDLLSIPS--FQT 643
Query: 254 LSVIFLDFVYIF---SVKSIYFIVWTIFRPFESVTK-YGINIPKSEASMTGGLVQEYDHS 309
I V+ F +++Y +++ + + + G S + L Q +S
Sbjct: 644 AGSIAYAHVFCFITLGQRNLYDVLYETQKVVRDIIRTEGYANTLQGLSPSTVLFQPRSNS 703
Query: 310 VLPSITPSF-TFIMTCLSMMPALYKMWCLCADRRYRPICF 348
+ P I +F + LS + ALY+ + +CF
Sbjct: 704 MYPCIGDAFNNMVRLDLSELTALYEGMFAKVQDLLKELCF 743
>SPCC14G10.01 ||SPCC18B5.12|dephospho-CoA kinase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 31.1 bits (67), Expect = 0.40
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 308 HSVLPSITPSFTFIMTCLSMMP 329
H+VLP ITPS+ F + CL + P
Sbjct: 191 HNVLPLITPSYFFTLLCLILPP 212
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 204 ESTSEWTLDYPPLFAWLEYGLSIVAKYFDPKMIKI-ENLNYKSDMAVLFQRLSVIFLDFV 262
E+T+EW L+Y L +WL+ L+ K + + KI E++ Y + RLSV L F
Sbjct: 2206 EATNEWELNYFGLQSWLKLVLADPKKSCEKEFSKIWESMRYLILFKHAWVRLSVSRL-FG 2264
Query: 263 YIFSV 267
+ F++
Sbjct: 2265 HFFAI 2269
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 29.9 bits (64), Expect = 0.93
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 232 DPKMIKIENLNYKSDMAVLFQRLSVIFLDFVYIFSVKSIYFIVWTIFRPFESVTKYGINI 291
D +I+ ++L Y S +A L + I L I + +Y I R +T N
Sbjct: 809 DALLIQKKSLTYSSFLAFLVKLCLDIVLTPQNIKTSTDVYIIQTWALRLLYQITSIWENP 868
Query: 292 PKSEASMTGG---LVQEYDHSVLPSITPSFTFIMTCLSMMPAL 331
K E+S+ G LVQE + S PS T +FI++ L M+ L
Sbjct: 869 LKFESSLIVGLFALVQEVERS--PSSTYR-SFILSLLQMLEFL 908
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 105 TKDCEDWWREIKCLNWQKLVIQKSEVLECLENDRKFTNFEELQF 148
T D E W +KCL W L S L+ E R F+ F
Sbjct: 172 TPDAEGWNEFLKCLEWAVLSSLDSRFLQLSEQIRSIKLFDSSIF 215
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 145 ELQFQSNNNTKFSNMKPNWPVAVLHL-EAAAKQPSHSTDFEVHRN 188
E+ SN+++K + PN+ + ++ ++AK HS D + HRN
Sbjct: 11 EMPSNSNSSSKLNAKSPNFIPSSSNIPRSSAKTKEHSADRKPHRN 55
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 27.9 bits (59), Expect = 3.8
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 231 FDPKMIKIENLNYKSDMAVLFQRLSV--IFLDFVYIFSV-KSIYFIVWTIFRPFESVTKY 287
F+ K+ +I+ N +D+ L S IF+D V + S KS+ IF+ E +
Sbjct: 422 FEMKINQIQIFNDNNDIDELTMTFSDLDIFMDSVTLVSFGKSLQSPCSLIFKKLERIVSL 481
Query: 288 GINIPKSEASMTGG 301
I+IP E S+ G
Sbjct: 482 FIHIPGGEISLPLG 495
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 118 LNWQKLVIQKSEVLECLENDRKFTNFEELQFQSNNNTKFSNM 159
+N +KL + K+++ + EN K L QSN T+F N+
Sbjct: 170 VNLEKLWVGKNKITK-FENFEKLQKLSLLSIQSNRITQFENL 210
>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 955
Score = 27.5 bits (58), Expect = 5.0
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 226 IVAKYFDPKMIKIENLNYKSDMAVLFQRLSVIFLDFVYIFSVKSIY---FIVWTIFRPFE 282
IV + D I L+ SD+ + +R+S + +F+Y F K+I I + + FE
Sbjct: 646 IVRLFQDIWPILSRTLDTFSDVLIC-ERISKLLKNFIYTFKEKAIVTLPVITEALIKGFE 704
Query: 283 SVTKYGINIPKSEASMTGGLVQEYDHSVLPSI 314
T+YG + S A + V E D L ++
Sbjct: 705 K-TQYGCFLWVSGACVRQFGVPEMDEQTLSAV 735
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 98 IVCIEGETKDCEDWWREIKCLNWQKLVIQKSEVLECLENDRKFTNFE-ELQFQSNN 152
I+ IEG K W+ + C + +K ++ K+ + E +E +K TN +L+F N
Sbjct: 392 IIHIEGNWK----LWKGLGCPSLEKPLVDKAAIDEAVEGLKKLTNTPVKLRFAMGN 443
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 491 LMMTSTYCALGVFYFWIKYYHYFLTFNVSKVPTFGQGTSSYNIRKSK 537
+++T Y LG+F F YY Y T KV G + Y++ K++
Sbjct: 79 ILVTKAYAILGLFRFTAGYYLYLCT--ERKVVAVIGGHNVYHVDKTQ 123
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.326 0.140 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,597,571
Number of Sequences: 5004
Number of extensions: 113516
Number of successful extensions: 373
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 362
Number of HSP's gapped (non-prelim): 18
length of query: 537
length of database: 2,362,478
effective HSP length: 76
effective length of query: 461
effective length of database: 1,982,174
effective search space: 913782214
effective search space used: 913782214
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 56 (26.6 bits)
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