GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000938-TA|BGIBMGA000938-PA|IPR006575|RWD,
IPR010541|Protein of unknown function DUF1115,
IPR013881|Pre-mRNA-splicing factor 3, IPR004856|ALG6, ALG8
glycosyltransferase
         (537 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    29   0.41 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   5.1  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   8.9  

>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 0.41
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 275 WTIFRPFESVTKYGINIPKSEASMTGGLVQEY 306
           W I R F+S T Y  ++     S TGGLV E+
Sbjct: 118 WPIRRGFDSFTYYRTHVRPDIFSETGGLVTEH 149


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 5.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 423 HVAIVFGNVPALYTVETKATKKR 445
           HVA  FG+  AL+ V++K  +KR
Sbjct: 48  HVAAGFGSCCALFGVQSKLAQKR 70


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 8.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 418 FLLLTHVAIVFGNVPALYTVETKATKKRRRRF 449
           FL +    IV GN   L T+    T+K R  F
Sbjct: 232 FLWVLFTVIVLGNSAVLVTLMLNRTRKSRMNF 263


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.140    0.450 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,269
Number of Sequences: 2123
Number of extensions: 23692
Number of successful extensions: 92
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89
Number of HSP's gapped (non-prelim): 3
length of query: 537
length of database: 516,269
effective HSP length: 67
effective length of query: 470
effective length of database: 374,028
effective search space: 175793160
effective search space used: 175793160
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 50 (24.2 bits)