Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000937-TA|BGIBMGA000937-PA|IPR000257|Uroporphyrinogen
decarboxylase (URO-D), IPR006361|Uroporphyrinogen decarboxylase HemE
         (310 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   6.6  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   6.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 70  LRRYEHLDASIIFSDILVI 88
           L RY  L   I+FS+ILVI
Sbjct: 138 LARYVALALVILFSEILVI 156


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 70  LRRYEHLDASIIFSDILVI 88
           L RY  L   I+FS+ILVI
Sbjct: 156 LARYVALALVILFSEILVI 174


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 242 KIVGENITLQGNLDPQDLYKTPEEIKTL 269
           +IV E +T+ G+L  +  Y   +E+K L
Sbjct: 38  QIVDEMVTVLGDLHRKPTYNNLQEMKYL 65


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.136    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,398
Number of Sequences: 317
Number of extensions: 3082
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 310
length of database: 114,650
effective HSP length: 57
effective length of query: 253
effective length of database: 96,581
effective search space: 24434993
effective search space used: 24434993
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)