GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000937-TA|BGIBMGA000937-PA|IPR000257|Uroporphyrinogen
decarboxylase (URO-D), IPR006361|Uroporphyrinogen decarboxylase HemE
         (310 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    26   1.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    26   1.6  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    25   2.1  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    25   2.1  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    25   2.7  
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    25   3.6  

>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 8/140 (5%)

Query: 3   YSNKNFPELKNDRLLRAALGKSVDKVPVWVMRQAGRYL-PEFQEVRVKHDFFTVCRTPEL 61
           Y+ +  P  +   L   ALG  +++  V ++  AG+ L PEF ++  KH    +     +
Sbjct: 7   YTVRLSPPCRAVELTAKALGLELERKLVNLL--AGQNLTPEFLKLNPKHTIPVLDDNGTI 64

Query: 62  ACE---VTLQPLRRYEHLDASIIFSDILVIPQALGMTVEMHPGVGPVFPK-PLQTPSEID 117
             E   + +  +R+Y   +         ++ QA  +   +H   G +F +    T   I 
Sbjct: 65  ISESHAIMIYLVRKYGQGEGKDALYPTEIVEQAR-VNEALHFESGVLFARLRFITELAIF 123

Query: 118 GLQPEGAVSRLDYVGKAITL 137
           G +PE    R++YV KA  L
Sbjct: 124 GRKPEIPEDRIEYVRKAYRL 143


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 105 VFPKPLQTPSEIDGLQPEGAVSRLDYVGKAITLTRHKIDGKVPLIGFTGAPVESGAQLLQ 164
           + PKP + P E    +P   +  L  V + + L RH  D   P +         G   + 
Sbjct: 498 LLPKPGKAPGESSSYRPLCMLDALGKVLERLILNRHLEDPDSPQLSDAQYGFRRGRSTIS 557

Query: 165 VFESSAD 171
             +S  D
Sbjct: 558 AIQSLVD 564


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 52  FFTVCRTPELACEVTLQPLRRYEH-----LDASIIFSDILVIPQALGMTVEMHPGV 102
           F  +C + +    V L+PL+ +EH     + A+ I S +  +PQA    +E HP +
Sbjct: 137 FILICISVDRYFAV-LKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFIFHLEGHPNI 191


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 52  FFTVCRTPELACEVTLQPLRRYEH-----LDASIIFSDILVIPQALGMTVEMHPGV 102
           F  +C + +    V L+PL+ +EH     + A+ I S +  +PQA    +E HP +
Sbjct: 137 FILICISVDRYFAV-LKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFIFHLEGHPNI 191


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 89  PQALGMTVEMHPGVGPVFPKPLQTPSEIDGLQPEGAVSRLDYVGKAITLTRHK 141
           P A    VE+   V P+F K ++       +QP+  +SR     K I + RH+
Sbjct: 21  PLAKPKKVEVKKVVNPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHR 73


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 94  MTVEMHPGVGPVFPKPLQTPSEIDGLQPEGAVSRLDYVGKAITL 137
           +T E  P + P  P       E+DG +   +++   YV K I L
Sbjct: 49  ITREEWPALKPTMPMRQMPVLEVDGKRVHQSLAMCRYVAKQINL 92


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,155
Number of Sequences: 2123
Number of extensions: 13244
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 6
length of query: 310
length of database: 516,269
effective HSP length: 64
effective length of query: 246
effective length of database: 380,397
effective search space: 93577662
effective search space used: 93577662
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)