Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000936-TA|BGIBMGA000936-PA|IPR004788|Ribose 5-phosphate
isomerase
(237 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015529-1|AAH15529.2| 311|Homo sapiens ribose 5-phosphate isom... 295 1e-79
AY050633-1|AAK95569.1| 237|Homo sapiens ribose 5-phosphate isom... 295 1e-79
AC096579-1|AAY24200.1| 177|Homo sapiens unknown protein. 224 2e-58
AC062029-2|AAY14778.1| 60|Homo sapiens unknown protein. 75 3e-13
X53051-1|CAA37218.1| 739|Homo sapiens precursor peptide protein. 37 0.071
M73255-1|AAA61270.1| 739|Homo sapiens vascular cell adhesion mo... 37 0.071
M60335-1|AAA61269.1| 739|Homo sapiens vascular cell adhesion mo... 37 0.071
M30257-1|AAA51917.1| 647|Homo sapiens VCAM1 protein. 37 0.071
BC085003-1|AAH85003.1| 739|Homo sapiens vascular cell adhesion ... 37 0.071
BC068490-1|AAH68490.2| 739|Homo sapiens vascular cell adhesion ... 37 0.071
BC017276-1|AAH17276.3| 739|Homo sapiens vascular cell adhesion ... 37 0.071
AK223266-1|BAD96986.1| 739|Homo sapiens vascular cell adhesion ... 37 0.071
AF536818-1|AAM96190.1| 739|Homo sapiens vascular cell adhesion ... 37 0.071
BC033821-1|AAH33821.1| 616|Homo sapiens chromosome 16 open read... 31 4.7
BC032400-1|AAH32400.1| 553|Homo sapiens C16orf44 protein protein. 31 4.7
AK022605-1|BAB14124.1| 616|Homo sapiens protein ( Homo sapiens ... 31 4.7
BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S. cer... 30 8.1
AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein. 30 8.1
>BC015529-1|AAH15529.2| 311|Homo sapiens ribose 5-phosphate
isomerase A (ribose 5-phosphate epimerase) protein.
Length = 311
Score = 295 bits (723), Expect = 1e-79
Identities = 134/226 (59%), Positives = 176/226 (77%), Gaps = 1/226 (0%)
Query: 4 EQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQL 63
E+AK++A AV+ V NN + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQA+QL
Sbjct: 79 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQL 138
Query: 64 IIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADY 123
I+++GL L +L+ +P ID+ IDGADEVD+++ LIKGGGGCL QEKI+A + + IVIAD+
Sbjct: 139 ILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADF 198
Query: 124 TKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYGGEIKLRSAVAKAGPVVTDNGNFIL 183
KDS LGD++ KG+PIEVIPMAYVP+ + +GG ++LR AV KAGPVVTDNGNFIL
Sbjct: 199 RKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFIL 258
Query: 184 DWMFANQNLDWEKVNNTIKLIPGVVETGLFVNMCCKAYFGQPEGNV 229
DW F + W +VN IK+IPGVV+TGLF+NM + YFG +G+V
Sbjct: 259 DWKFDRVH-KWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSV 303
>AY050633-1|AAK95569.1| 237|Homo sapiens ribose 5-phosphate
isomerase protein.
Length = 237
Score = 295 bits (723), Expect = 1e-79
Identities = 134/226 (59%), Positives = 176/226 (77%), Gaps = 1/226 (0%)
Query: 4 EQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQL 63
E+AK++A AV+ V NN + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQA+QL
Sbjct: 5 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQL 64
Query: 64 IIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADY 123
I+++GL L +L+ +P ID+ IDGADEVD+++ LIKGGGGCL QEKI+A + + IVIAD+
Sbjct: 65 ILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADF 124
Query: 124 TKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYGGEIKLRSAVAKAGPVVTDNGNFIL 183
KDS LGD++ KG+PIEVIPMAYVP+ + +GG ++LR AV KAGPVVTDNGNFIL
Sbjct: 125 RKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFIL 184
Query: 184 DWMFANQNLDWEKVNNTIKLIPGVVETGLFVNMCCKAYFGQPEGNV 229
DW F + W +VN IK+IPGVV+TGLF+NM + YFG +G+V
Sbjct: 185 DWKFDRVH-KWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSV 229
>AC096579-1|AAY24200.1| 177|Homo sapiens unknown protein.
Length = 177
Score = 224 bits (548), Expect = 2e-58
Identities = 101/170 (59%), Positives = 132/170 (77%), Gaps = 1/170 (0%)
Query: 60 AKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIV 119
A+QLI+++GL L +L+ +P ID+ IDGADEVD+++ LIKGGGGCL QEKI+A + + IV
Sbjct: 1 ARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIV 60
Query: 120 IADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYGGEIKLRSAVAKAGPVVTDNG 179
IAD+ KDS LGD++ KG+PIEVIPMAYVP+ + +GG ++LR AV KAGPVVTDNG
Sbjct: 61 IADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNG 120
Query: 180 NFILDWMFANQNLDWEKVNNTIKLIPGVVETGLFVNMCCKAYFGQPEGNV 229
NFILDW F + W +VN IK+IPGVV+TGLF+NM + YFG +G+V
Sbjct: 121 NFILDWKFDRVH-KWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSV 169
>AC062029-2|AAY14778.1| 60|Homo sapiens unknown protein.
Length = 60
Score = 74.5 bits (175), Expect = 3e-13
Identities = 33/56 (58%), Positives = 44/56 (78%)
Query: 4 EQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQ 59
E+AK++A AV+ V NN + G+GSGST+V+AVQR+AERV+ E L + CIPTSFQ
Sbjct: 5 EEAKKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQ 60
>X53051-1|CAA37218.1| 739|Homo sapiens precursor peptide protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>M73255-1|AAA61270.1| 739|Homo sapiens vascular cell adhesion
molecule-1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>M60335-1|AAA61269.1| 739|Homo sapiens vascular cell adhesion
molecule-1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>M30257-1|AAA51917.1| 647|Homo sapiens VCAM1 protein.
Length = 647
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 422 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 479
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 480 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 539
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 540 WIILKKK 546
>BC085003-1|AAH85003.1| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>BC068490-1|AAH68490.2| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>BC017276-1|AAH17276.3| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>AK223266-1|BAD96986.1| 739|Homo sapiens vascular cell adhesion
molecule 1 isoform a precursor variant protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>AF536818-1|AAM96190.1| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 36.7 bits (81), Expect = 0.071
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 31 STVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELE-TNPNIDVTIDGADE 89
+TV+ + + E E + +TC+ F A +++ L GEL+ + N +T+
Sbjct: 514 TTVLVSPSSILE--EGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTLISTKM 571
Query: 90 VDSNMTLIKG---GGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMA 146
DS + L +G G + ++I + K I + + +SVK GD +P
Sbjct: 572 EDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCTCGNVPET 631
Query: 147 YVPIKNK 153
++ +K K
Sbjct: 632 WIILKKK 638
>BC033821-1|AAH33821.1| 616|Homo sapiens chromosome 16 open reading
frame 44 protein.
Length = 616
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 117 LIVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYGGEIKL 164
L V +DY +G R +E+I +Y+ +K + LYGGE+ L
Sbjct: 64 LAVCSDYFNSMFTIGMREAFQKEVELIGASYIGLKAVVDFLYGGELVL 111
>BC032400-1|AAH32400.1| 553|Homo sapiens C16orf44 protein protein.
Length = 553
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 117 LIVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYGGEIKL 164
L V +DY +G R +E+I +Y+ +K + LYGGE+ L
Sbjct: 64 LAVCSDYFNSMFTIGMREAFQKEVELIGASYIGLKAVVDFLYGGELVL 111
>AK022605-1|BAB14124.1| 616|Homo sapiens protein ( Homo sapiens
cDNA FLJ12543 fis, clone NT2RM4000590, weakly similar to
RING CANAL PROTEIN. ).
Length = 616
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 117 LIVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYGGEIKL 164
L V +DY +G R +E+I +Y+ +K + LYGGE+ L
Sbjct: 64 LAVCSDYFNSMFTIGMREAFQKEVELIGASYIGLKAVVDFLYGGELVL 111
>BC001965-1|AAH01965.1| 910|Homo sapiens RAD54 homolog B (S.
cerevisiae) protein.
Length = 910
Score = 29.9 bits (64), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 16 DQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQ 62
D F + C F +G GST + ++A + S K C P+S + +Q
Sbjct: 200 DDFSSGRC-FQLGGGSTAISHSSQVARKCFSNPFKSVCKPSSKENRQ 245
>AF112481-1|AAD34331.1| 910|Homo sapiens RAD54B protein protein.
Length = 910
Score = 29.9 bits (64), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 16 DQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQ 62
D F + C F +G GST + ++A + S K C P+S + +Q
Sbjct: 200 DDFSSGRC-FQLGGGSTAISHSSQVARKCFSNPFKSVCKPSSKENRQ 245
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.136 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,531,232
Number of Sequences: 224733
Number of extensions: 1310666
Number of successful extensions: 1930
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1920
Number of HSP's gapped (non-prelim): 18
length of query: 237
length of database: 73,234,838
effective HSP length: 88
effective length of query: 149
effective length of database: 53,458,334
effective search space: 7965291766
effective search space used: 7965291766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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