Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000934-TA|BGIBMGA000934-PA|IPR001148|Carbonic anhydrase,
eukaryotic
         (257 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.43 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.43 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.43 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.43 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.43 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.43 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   0.43 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.43 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   7.0  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query: 153 PDTDYYMTYDGSTTAPACF 171
           P TDYY     ST  PAC+
Sbjct: 25  PGTDYYNPNANSTYPPACY 43


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/58 (22%), Positives = 22/58 (37%)

Query: 80  GPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAELGDLSNPELRVLTEELENIKYG 137
           G L+Y     ++ +  G       EH  N  +  A   D SN  L+   + +    +G
Sbjct: 84  GFLTYTKADRDVDLFRGSSTPESPEHYYNQKTLQANNNDASNGNLKFSIDNILKADFG 141


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.139    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,172
Number of Sequences: 317
Number of extensions: 3245
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 257
length of database: 114,650
effective HSP length: 55
effective length of query: 202
effective length of database: 97,215
effective search space: 19637430
effective search space used: 19637430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)