Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000934-TA|BGIBMGA000934-PA|IPR001148|Carbonic anhydrase,
eukaryotic
(257 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 90 1e-18
At1g08065.1 68414.m00882 carbonic anhydrase family protein simil... 79 4e-15
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 72 4e-13
At3g52720.1 68416.m05808 carbonic anhydrase family protein low s... 70 2e-12
At2g28210.1 68415.m03425 carbonic anhydrase family protein simil... 69 3e-12
At4g21000.1 68417.m03039 carbonic anhydrase family protein simil... 65 4e-11
At5g04180.1 68418.m00406 carbonic anhydrase family protein simil... 63 2e-10
At3g52720.2 68416.m05809 carbonic anhydrase family protein low s... 59 3e-09
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 56 2e-08
At5g49220.1 68418.m06093 expressed protein 32 0.33
At1g71320.1 68414.m08232 S locus F-box-related / SLF-related con... 30 1.3
At1g06840.1 68414.m00729 leucine-rich repeat transmembrane prote... 30 1.3
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 29 3.1
At5g58150.1 68418.m07278 leucine-rich repeat transmembrane prote... 29 4.1
At3g11850.2 68416.m01453 expressed protein contains Pfam profile... 29 4.1
At3g11850.1 68416.m01452 expressed protein contains Pfam profile... 29 4.1
At5g25910.1 68418.m03077 disease resistance family protein conta... 28 7.1
At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative... 28 7.1
At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative... 28 7.1
At1g62950.1 68414.m07108 leucine-rich repeat transmembrane prote... 28 7.1
At3g24310.1 68416.m03052 myb family transcription factor similar... 27 9.4
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 90.2 bits (214), Expect = 1e-18
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 6 GPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRINGLISNTGHSVIF 65
GP WG + PEW +C KG QSP++L E++ +L L+ D + N + N GH ++
Sbjct: 49 GPERWGELKPEWEMCGKGEMQSPIDLMNERVNIVSHLGRLNRDYNPSNATLKNRGHDIML 108
Query: 66 TVENETRHHINITGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAELGDL------ 119
E + I I G ++Y+ ++H H SEH ING F EL +
Sbjct: 109 KFE-DGAGTIKING----FEYELQQLHWH------SPSEHTINGRRFALELHMVHEGRNR 157
Query: 120 -------------SNPELRVLTEELENI-KYGGAEMPVNKLSVRGLLPDTDYYMTYDGST 165
++ +R L +ELE I + AE V + + + Y Y GS
Sbjct: 158 RMAVVTVLYKIGRADTFIRSLEKELEGIAEMEEAEKNVGMIDPTKIKIGSRKYYRYTGSL 217
Query: 166 TAPACFETVTWIIVNKPIYITKQQLHGLRRLMQGDAKHPKAPLGNNFRPPQPLHHRAV 223
T P C + VTW +V K +T++Q+ LR + DA +N RP QP + R V
Sbjct: 218 TTPPCTQNVTWSVVRKVRTVTRKQVKLLRVAVHDDA-------NSNARPVQPTNKRIV 268
>At1g08065.1 68414.m00882 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 263
Score = 78.6 bits (185), Expect = 4e-15
Identities = 68/234 (29%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 6 GPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRINGLISNTGHSVIF 65
GP WG + PEW++C KG QSP++L +++L D NL +L N I N GH ++
Sbjct: 30 GPENWGRLKPEWAMCGKGNMQSPIDLTDKRVLIDHNLGYLRSQYLPSNATIKNRGHDIMM 89
Query: 66 TVENETRHHINITGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAE---------- 115
E + IT YK Q +IH H SEH +NG F E
Sbjct: 90 KFEGGNA-GLGITINGTEYKLQ--QIHWH------SPSEHTLNGKRFVLEEHMVHQSKDG 140
Query: 116 -------LGDLSNPELRVLTEE--LENI-KYGGAEMPVNKLSVRGLLPDTDYYMTYDGST 165
L P+ +LT E L+ I ++ V + R ++ +Y + GS
Sbjct: 141 RNAVVAFFYKLGKPDYFLLTLERYLKRITDTHESQEFVEMVHPRTFGFESKHYYRFIGSL 200
Query: 166 TAPACFETVTWIIVNKPIYITKQQLHGLRRLMQGDAKHPKAPLGNNFRPPQPLH 219
T P C E V W I + +T +QL LR + + PL P L+
Sbjct: 201 TTPPCSENVIWTISKEMRTVTLKQLIMLRVTVHDQSNSNARPLQRKNERPVALY 254
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 71.7 bits (168), Expect = 4e-13
Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 31/212 (14%)
Query: 2 KTYLGPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRINGLISNTGH 61
KT GP WG INP W +CN GR QSP++L E++ + + K +I+N GH
Sbjct: 41 KTEKGPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYK-PAPAVITNRGH 99
Query: 62 SVIFTVENETRHHINITGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAELG---- 117
++ + + + G K F+ + H+ H SEH +NG + EL
Sbjct: 100 DIMVSWKGD-------AGKMTIRKTDFNLVQCHW--HSP--SEHTVNGTRYDLELHMVHT 148
Query: 118 -------------DLSNPELRVLTEELENIK-YGGAEMPVNKLSVRGLLPDTDYYMTYDG 163
L P LT+ L IK G E+ + + R + T + Y G
Sbjct: 149 SARGRTAVIGVLYKLGEPN-EFLTKLLNGIKAVGNKEINLGMIDPREIRFQTRKFYRYIG 207
Query: 164 STTAPACFETVTWIIVNKPIYITKQQLHGLRR 195
S T P C E V W +V + I+ +Q+ LR+
Sbjct: 208 SLTVPPCTEGVIWTVVKRVNTISMEQITALRQ 239
>At3g52720.1 68416.m05808 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 284
Score = 69.7 bits (163), Expect = 2e-12
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 26/249 (10%)
Query: 6 GPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRING-LISNTGHSVI 64
GP WG +NP ++ C G+ QSP++++ ++ ++ L +H + + N L+++ + +
Sbjct: 38 GPNQWGHLNPHFTTCAVGKLQSPIDIQRRQIFYNHKLNSIHREYYFTNATLVNHVCNVAM 97
Query: 65 FTVENETRHHINITGGPLSYKYQFHEIHIHYGLHD-QFGSE-HAIN-----GYSFPAELG 117
F E I L + +H H+ LH Q+ +E H ++ ++ A L
Sbjct: 98 FFGEGAGDVIIENKNYTL-LQMHWHTPSEHH-LHGVQYAAELHMVHQAKDGSFAVVASLF 155
Query: 118 DLSNPE--LRVLTEELENIKY----GG--AEMPVNKLSVRGLLPDTDYYMTYDGSTTAPA 169
+ E L + E+L +K G A++ V ++ R + T Y Y GS T P
Sbjct: 156 KIGTEEPFLSQMKEKLVKLKEERLKGNHTAQVEVGRIDTRHIERKTRKYYRYIGSLTTPP 215
Query: 170 CFETVTWIIVNKPIYITKQQLHGLRRLMQGDAKHPKAPLGNNFRPPQPLHHRAVRTNIDF 229
C E V+W I+ K ++K+Q+ LR + K NN RP QPL+ R V D
Sbjct: 216 CSENVSWTILGKVRSMSKEQVELLRSPLDTSFK-------NNSRPCQPLNGRRVEMFHDH 268
Query: 230 D-LNKLKAG 237
+ ++K + G
Sbjct: 269 ERVDKKETG 277
>At2g28210.1 68415.m03425 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 217
Score = 68.9 bits (161), Expect = 3e-12
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 30/196 (15%)
Query: 6 GPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRINGLISNTGHSVIF 65
GPA WG + PEW +C KG QSP++L +++ +L+ L N + N GH ++
Sbjct: 20 GPAKWGKLRPEWKMCGKGEMQSPIDLMNKRVRLVTHLKKLTRHYKPCNATLKNRGHDMML 79
Query: 66 TVENETRHHINITGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAEL--------G 117
E I + G +Y+ ++H H SEH +NG F EL G
Sbjct: 80 KFGEEGSGSITVNGT----EYKLLQLHWHSP------SEHTMNGRRFALELHMVHENING 129
Query: 118 DLS---------NPE--LRVLTEELENIK-YGGAEMPVNKLSVRGLLPDTDYYMTYDGST 165
L+ P+ L +L +L I AE V+ + R + + + Y GS
Sbjct: 130 SLAVVTVLYKIGRPDSFLGLLENKLSAITDQNEAEKYVDVIDPRDIKIGSRKFYRYIGSL 189
Query: 166 TAPACFETVTWIIVNK 181
T P C + V W +V K
Sbjct: 190 TTPPCTQNVIWTVVKK 205
>At4g21000.1 68417.m03039 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 260
Score = 65.3 bits (152), Expect = 4e-11
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 2 KTYLGPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKH--RINGLISNT 59
KT GPA WG ++P+W +C+ G+ QSP++L E++ + + KH + +I +
Sbjct: 42 KTEKGPAEWGKLDPQWKVCSTGKIQSPIDLTDERVSL---IHDQALSKHYKPASAVIQSR 98
Query: 60 GHSVIFTVENETRHHINITGGPLS-YKYQFHEIHIHYGLHDQFGSEHAINGYSFPAELG- 117
GH V+ + + + GG ++ ++ + + H+ H SEH ING S+ EL
Sbjct: 99 GHDVMVSWKGD--------GGKITIHQTDYKLVQCHW--HSP--SEHTINGTSYDLELHM 146
Query: 118 ----------------DLSNPELRVLTEELENIK-YGGAEMPVNKLSVRGLLPDTDYYMT 160
L P+ LT+ L IK G E+ + + R + +T+ +
Sbjct: 147 VHTSASGKTTVVGVLYKLGEPD-EFLTKILNGIKGVGKKEIDLGIVDPRDIRFETNNFYR 205
Query: 161 YDGSTTAPACFETVTWIIVNKPIY 184
Y GS T P C E V W + + +Y
Sbjct: 206 YIGSLTIPPCTEGVIWTVQKRVLY 229
>At5g04180.1 68418.m00406 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 277
Score = 63.3 bits (147), Expect = 2e-10
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 19/231 (8%)
Query: 7 PAFWGLINPEWSLCNKGRRQSPVNLEPE-KLLFDPNLRFLHIDKHRINGLISNTGHSVIF 65
P+ W I EW +C G+RQSP+NL P+ + + L + ++ N G +
Sbjct: 36 PSKWSSIKAEWKICGTGKRQSPINLTPKIARIVHNSTEILQTYYKPVEAILKNRGFDMKV 95
Query: 66 TVENET-RHHINITGGPLSYKYQFHEIHIHYGLHDQFGSE-HAINGY--SFPAELGDL-- 119
E++ + IN T L + +H H+ + E H ++ A +G L
Sbjct: 96 KWEDDAGKIVINDTDYKLVQSH-WHAPSEHFLDGQRLAMELHMVHKSVEGHLAVIGVLFR 154
Query: 120 ---SNPELRVLTEELENIK-YGGAEMPVNKLSVRGLLPDTDYYMTYDGSTTAPACFETVT 175
N + + +++ I E+ + K+ R D + Y GS T P C E V
Sbjct: 155 EGEPNAFISRIMDKIHKIADVQDGEVSIGKIDPREFGWDLTKFYEYRGSLTTPPCTEDVM 214
Query: 176 WIIVNKPIYITKQQLHGLRRLMQGDAKHPKAPLGNNFRPPQPLHHRAVRTN 226
W I+NK ++++Q+ L +G + N RP QPL+ R V N
Sbjct: 215 WTIINKVGTVSREQIDVLTDARRGGYE-------KNARPAQPLNGRLVYLN 258
>At3g52720.2 68416.m05809 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 230
Score = 58.8 bits (136), Expect = 3e-09
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 6 GPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRING-LISNTGHSVI 64
GP WG +NP ++ C G+ QSP++++ ++ ++ L +H + + N L+++ + +
Sbjct: 38 GPNQWGHLNPHFTTCAVGKLQSPIDIQRRQIFYNHKLNSIHREYYFTNATLVNHVCNVAM 97
Query: 65 FTVENETRHHINITGGPLSYKYQFHEIHIHYGLHD-QFGSE-HAIN-----GYSFPAELG 117
F E I L + +H H+ LH Q+ +E H ++ ++ A L
Sbjct: 98 FFGEGAGDVIIENKNYTL-LQMHWHTPSEHH-LHGVQYAAELHMVHQAKDGSFAVVASLF 155
Query: 118 DL--SNPELRVLTEELENIK----YGG--AEMPVNKLSVRGLLPDTDYYMTYDGSTTAPA 169
+ P L + E+L +K G A++ V ++ R + T Y Y GS T P
Sbjct: 156 KIGTEEPFLSQMKEKLVKLKEERLKGNHTAQVEVGRIDTRHIERKTRKYYRYIGSLTTPP 215
Query: 170 CFETVTWIIVNKPIY 184
C E V+W I+ K I+
Sbjct: 216 CSENVSWTILGKVIF 230
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 6 GPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRINGLISNTGHSVIF 65
GPA WG ++ EW +C G+ QSP++L + ++ L N I N GH ++
Sbjct: 149 GPAKWGTLDAEWKMCGIGKMQSPIDLRDKNVVVSNKFGLLRSQYLPSNTTIKNRGHDIML 208
Query: 66 TVENETRHHINITGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAE 115
+ + I +T +YQ ++H H SEH ING F E
Sbjct: 209 KFKGGNK-GIGVT--IRGTRYQLQQLHWH------SPSEHTINGKRFALE 249
>At5g49220.1 68418.m06093 expressed protein
Length = 409
Score = 32.3 bits (70), Expect = 0.33
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 104 EHAINGYSFPAELGDLSNPELRVLTEELENIKYGGAEMPVNKLSVRGLLPDTDYYMTYDG 163
+ +I G S + ++SNP+ R+L E LE G E NK+S L MTY
Sbjct: 235 DQSITG-SLSSGEAEISNPQGRLLFEYLEYEPPFGREPLANKIS--DLASRVPELMTYRS 291
Query: 164 STTAPACFETVTWI-IVNKPIYITKQQL 190
P+ + +V+W I P+ T Q L
Sbjct: 292 CDLLPSSWVSVSWYPIYRIPVGPTLQNL 319
>At1g71320.1 68414.m08232 S locus F-box-related / SLF-related
contains F-box domain Pfam:PF00646; contains TIGRFAM
TIGR01640: F-box protein interaction domain; similar to
S locus F-box (SLF)-S2-like protein (GI:13161528)
[Antirrhinum hispanicum]
Length = 392
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 40 PNLRFLHIDKHRINGLISNTGHSVIFTVENETRHHIN 76
PN++FLHI +H + +S+ F +E +R N
Sbjct: 63 PNMKFLHISQHFTANFVEEYSNSITFLLETFSRDDQN 99
>At1g06840.1 68414.m00729 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
GB:BAA11869 GI:1389566 from [Arabidopsis thaliana]
Length = 939
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 33 PEKLLFDPNLRFLHIDKHRINGLISNTGHSVIFTVENETRH-HI--NITGGPLSYKYQFH 89
PE+L F PNL + ID++RI+G + + F N+T+H H+ N G + +
Sbjct: 134 PEELGFLPNLDRIQIDENRISGPLPKS-----FANLNKTKHFHMNNNSISGQIPPELGSL 188
Query: 90 EIHIHYGLHDQFGSEHAINGYSFPAELGDLSNPELRVLTEELENIKYGGAEMP 142
+H L + ++GY P EL ++ P L +L +L+N + G +P
Sbjct: 189 PSIVHILL-----DNNNLSGY-LPPELSNM--PRLLIL--QLDNNHFDGTTIP 231
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 36 LLFDPNLRFLHIDKHRINGLISNTGHSVIFTVENETRHHINITGGPLSYKYQFHEIHIHY 95
L+FD NL+ H H +GL S G I TVEN R + G LS+ I+I
Sbjct: 12 LIFDSNLQISHCSYHGYSGLTSRGG---INTVENH-RWVWHNNGVRLSFPRAESSINITM 67
Query: 96 GLHDQFGSEHAINGYSFPAELGD 118
G Q G +++ + EL D
Sbjct: 68 GCTLQRGIAKSLSQENL-VELSD 89
>At5g58150.1 68418.m07278 leucine-rich repeat transmembrane protein
kinase, putative
Length = 785
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 40 PNLRFLHIDKHRINGLISNTGHSVIFTVE-NETRHHINITGGPLSYKYQFHEIHIHYGLH 98
P L+ L++ ++ G + H + TV+ +E R +I +K+ + + IH L
Sbjct: 210 PLLKSLNLSRNLFQGSLIGVLHENVETVDLSENRFDGHILQLIPGHKHNWSSL-IHLDLS 268
Query: 99 DQFGSEHAINGYSFPAELGDLSNPELRVLTEELENI 134
D H NG S +LG L+ R +E I
Sbjct: 269 DNSFVGHIFNGLSSAHKLGHLNLACNRFRAQEFPEI 304
>At3g11850.2 68416.m01453 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 504
Score = 28.7 bits (61), Expect = 4.1
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 24 RRQSPVNLEPEKLLFDPNLR-FLHIDKHRINGLISNTGHSVIFTVENETRHHINITGGPL 82
RR SP L LR + +D R S V +T N + ++ G +
Sbjct: 278 RRISPTGSSSSHLGASKELRPDVFVDSPRSQSYSSKKMEDVSYTENNNAKDDLSEIGDDM 337
Query: 83 SYK-YQFHEIHIHYGLHDQFGSEHAI-NGYS-----FPAELGDLSNPELRVLTEELENIK 135
S + Y +H H +E I +G S FP E DL +P++ L L+ ++
Sbjct: 338 SDRVYTIDSVHHSSVAHSGGVAEQKIEDGASDGNVVFPREHTDLGDPDITKLYMRLQALE 397
Query: 136 YGGAEMPVNKLSVR 149
M LS+R
Sbjct: 398 ADRESMKHALLSMR 411
>At3g11850.1 68416.m01452 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 504
Score = 28.7 bits (61), Expect = 4.1
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 24 RRQSPVNLEPEKLLFDPNLR-FLHIDKHRINGLISNTGHSVIFTVENETRHHINITGGPL 82
RR SP L LR + +D R S V +T N + ++ G +
Sbjct: 278 RRISPTGSSSSHLGASKELRPDVFVDSPRSQSYSSKKMEDVSYTENNNAKDDLSEIGDDM 337
Query: 83 SYK-YQFHEIHIHYGLHDQFGSEHAI-NGYS-----FPAELGDLSNPELRVLTEELENIK 135
S + Y +H H +E I +G S FP E DL +P++ L L+ ++
Sbjct: 338 SDRVYTIDSVHHSSVAHSGGVAEQKIEDGASDGNVVFPREHTDLGDPDITKLYMRLQALE 397
Query: 136 YGGAEMPVNKLSVR 149
M LS+R
Sbjct: 398 ADRESMKHALLSMR 411
>At5g25910.1 68418.m03077 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-5D [Lycopersicon
esculentum] gi|3894393|gb|AAC78596;
Length = 811
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 55 LISNTGHSVIFTVENETRHHINITGGPLSYKYQFHEI 91
L+ N G S T+ N TR + N TG S+ + H +
Sbjct: 408 LLQNNGFSGSVTISNNTRSNNNFTGKIPSFICELHSL 444
>At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 40 PNLRFLHIDKHRINGLISNTGHSVI-FTVEN-ETRHHINITGGPLSYKYQFHEIHIHYG 96
P + +H+ + + + N + + F ++N + +I+ G +Y+Y + I HYG
Sbjct: 515 PEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYG 573
>At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 40 PNLRFLHIDKHRINGLISNTGHSVI-FTVEN-ETRHHINITGGPLSYKYQFHEIHIHYG 96
P + +H+ + + + N + + F ++N + +I+ G +Y+Y + I HYG
Sbjct: 515 PEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYG 573
>At1g62950.1 68414.m07108 leucine-rich repeat transmembrane protein
kinase, putative contains protein kinase domains
Length = 890
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 31 LEPEKLLFDPNLRFLHIDKHRINGLISNTGHSVIFTVENETRHHINITG 79
L PE + PNLRFL + K+ G I N+ + + + H N++G
Sbjct: 136 LVPEFIGDLPNLRFLDLSKNAFFGEIPNSLFKFCYKTKFVSLSHNNLSG 184
>At3g24310.1 68416.m03052 myb family transcription factor similar
to myb protein 305 GB:JQ0958 from [garden snapdragon]
(Plant Cell (1991) 3 (2), 115-125);
Length = 269
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 8 AFWGLINPEWSLCNKGRRQSPVNLEPEKLLFD 39
+ WG + W + +G R+ P E ++LL D
Sbjct: 2 SLWGGMGGGWGMVEEGWRKGPWTAEEDRLLID 33
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.139 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,060,639
Number of Sequences: 28952
Number of extensions: 318423
Number of successful extensions: 696
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 32
length of query: 257
length of database: 12,070,560
effective HSP length: 80
effective length of query: 177
effective length of database: 9,754,400
effective search space: 1726528800
effective search space used: 1726528800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -