GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000931-TA|BGIBMGA000931-PA|IPR006941|Ribonuclease CAF1,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
         (318 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione S-tran...    28   0.40 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   3.7  
AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450 pr...    23   8.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.6  

>AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 222

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 131 TWQFNFKFNLQEDMYAQDSIDLLQNSGLQFRKHEEDGIEPLEFAELLMSSGLVLIDNI 188
           +W+     NL+E  Y    I L+++ G Q   +E   + P+E    L   G  LI+++
Sbjct: 23  SWRVRIALNLKEIPYDIKPISLIKSGGEQ-HCNEYREVNPMEQVPALQIDGHTLIESV 79


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 49  IKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGV 83
           I  V N N  + +  I  + QKY W+  D EF GV
Sbjct: 915 ITKVRNEN-KDGYDRISGMEQKYPWIPEDKEFFGV 948


>AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450
           protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 209 QNLPQDENDFFESLRLYFPTVY 230
           QNLP  +    ESLRLY P  +
Sbjct: 26  QNLPYLDRVIKESLRLYPPVAF 47


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 51 DVWNHNLHEEFQIIRQVVQKYHWVAMDTEFP 81
          D + H L+E+ Q++     +Y  ++MDT  P
Sbjct: 8  DSYRHELYEQQQLLGTSPIQYTVLSMDTPSP 38


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,526
Number of Sequences: 2123
Number of extensions: 14249
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 4
length of query: 318
length of database: 516,269
effective HSP length: 64
effective length of query: 254
effective length of database: 380,397
effective search space: 96620838
effective search space used: 96620838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)