Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000930-TA|BGIBMGA000930-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal, IPR001005|Myb,
DNA-binding, IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR009057|Homeodomain-like, IPR000330|SNF2-related
(1026 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 456 e-129
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 452 e-128
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 422 e-118
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 411 e-115
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 338 3e-93
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 226 1e-59
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 226 1e-59
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 224 4e-59
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 190 6e-49
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 188 3e-48
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 186 1e-47
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 170 7e-43
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 169 1e-42
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 161 6e-40
SPBC582.10c |||ATP-dependent DNA helicase Rhp16b |Schizosaccharo... 106 2e-23
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 99 2e-21
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 97 8e-21
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 93 2e-19
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 92 3e-19
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 61 9e-10
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 49 3e-06
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 41 8e-04
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 38 0.009
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 34 0.088
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 34 0.088
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 33 0.27
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 31 1.1
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 1.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 1.4
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 30 1.9
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 30 1.9
SPBC3H7.10 |||elongator homolog|Schizosaccharomyces pombe|chr 2|... 29 2.5
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 29 4.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 5.8
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 28 5.8
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 28 7.6
SPAC343.06c |||scramblase|Schizosaccharomyces pombe|chr 1|||Manual 28 7.6
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 28 7.6
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 456 bits (1124), Expect = e-129
Identities = 239/545 (43%), Positives = 337/545 (61%), Gaps = 19/545 (3%)
Query: 124 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGP 183
P + G++++YQ+RGL WMISLY N +NGILADEMGLGKT+QTISL+ ++ K GP
Sbjct: 409 PSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGP 468
Query: 184 HIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMII 243
+VIVP STLTNW EF++W PS+ + G + R + + N+ V +T+YE II
Sbjct: 469 FLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKA-LHPQVRHSNFQVLLTTYEYII 527
Query: 244 REKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMN-RLLLTGTPLQNNLHELWAL 302
+++ + + W YM+IDE HR+KN +SKL+ L + S RL+LTGTPLQNNL ELWAL
Sbjct: 528 KDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWAL 587
Query: 303 LNFLLPDVFNSSDDFDSWFNTNAALGDNQ------------LVSRLHAVLRPFLLRRXXX 350
LNF+LP +FNS FD WFNT A Q ++ RLH VLRPFLLRR
Sbjct: 588 LNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKK 647
Query: 351 XXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVNGA--GKVEKMRLQNILMQLRKC 408
+S +Q++ Y ++ + V A GK LQN +MQL+K
Sbjct: 648 DVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKI 707
Query: 409 CNHPYLFDGAEPG--PPYTTDEHLVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDI 466
CNHP++F+ E P + L GK +LD++LPKL R+L+F QMT++++I
Sbjct: 708 CNHPFVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNI 767
Query: 467 LEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVV 526
+EDY +RQ++Y RLDG T +DR++ + +N +E +F+LSTRAGGLG+NL +AD V
Sbjct: 768 MEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTV 827
Query: 527 IIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQS 586
II+DSDWNP DLQA DRAHRIGQ K+VR++RLIT+ +VEE I+ RA+ KL +D VIQ+
Sbjct: 828 IIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQA 887
Query: 587 GRLVDTKNQLNKDEMLNMIRHGANHVFASKD-SEVTDEDIDTILAKGESKTEELKQKLES 645
G+ + ++ L + N + + E+ D++++ ILA+G+ + KQ E
Sbjct: 888 GKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTED 947
Query: 646 LGESS 650
L S
Sbjct: 948 LERES 952
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 452 bits (1115), Expect = e-128
Identities = 230/529 (43%), Positives = 335/529 (63%), Gaps = 18/529 (3%)
Query: 124 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGP 183
P G ++DYQ++GL WM+SLY N +NGILADEMGLGKT+QTI+ + Y+ KN GP
Sbjct: 861 PKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGP 920
Query: 184 HIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMII 243
++IVP STLTNW+ EF+KW PS+K + G + R T ++ + N++V +T++E II
Sbjct: 921 FLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKT-LQSQIRSSNFNVLLTTFEYII 979
Query: 244 REKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREF-KSMNRLLLTGTPLQNNLHELWAL 302
+++ + + W +M+IDE HRIKN +SKL+ L + S RL+LTGTPLQNNL ELWAL
Sbjct: 980 KDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWAL 1039
Query: 303 LNFLLPDVFNSSDDFDSWFNTNAA-------LGDNQ-----LVSRLHAVLRPFLLRRXXX 350
LNF+LP +FNS FD WFNT A +G N+ ++ RLH VLRPFL RR
Sbjct: 1040 LNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKK 1099
Query: 351 XXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVNGA-GKVEKMRLQNILMQLRKCC 409
LS +Q + Y ++ + V+G GK LQN +MQL+K C
Sbjct: 1100 DVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIKGLQNTVMQLKKIC 1159
Query: 410 NHPYLFDGAEPG-PPYTTDEHLVYNC-GKLTILDKLLPKLQEQESRVLIFSQMTRMLDIL 467
NHP++F+ E P T+ L++ GK +LD++LPKL + L+F QMT+++ I+
Sbjct: 1160 NHPFIFEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIM 1219
Query: 468 EDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVI 527
EDY + +KY RLDG T +DR + ++N S+ ++FMLSTRAGGLG+NL +AD VI
Sbjct: 1220 EDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVI 1279
Query: 528 IYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSG 587
I+D+DWNP DLQA DRAHRIGQ K+VR+ RLIT+ ++EE I+ RA+ KL LD VIQ+G
Sbjct: 1280 IFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAG 1339
Query: 588 RLVDTKNQLNKDEML-NMIRHGANHVFASKDSEVTDEDIDTILAKGESK 635
+ + ++ L +++ H + E+ D++++ ++++ + +
Sbjct: 1340 KFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDELNELISRTDEE 1388
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 422 bits (1040), Expect = e-118
Identities = 233/559 (41%), Positives = 329/559 (58%), Gaps = 24/559 (4%)
Query: 119 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFK 178
+ E P YIK GE+RD+Q+ G+NWM L+ NGILADEMGLGKT+QT+ L Y+ H
Sbjct: 377 KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL 436
Query: 179 NVPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETR-NTFIRETLMPGN-----W 232
GP +++VP ST+ W W P L ++C G+ E+R N E + N +
Sbjct: 437 KQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKF 496
Query: 233 DVCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPL 292
++ +T+YE I+++K W+Y+ IDEAHR+KN +S L E L +F++ NRLL+TGTPL
Sbjct: 497 NILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPL 556
Query: 293 QNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSRLHAVLRPFLLRRXXXXX 352
QNNL EL +L+NFL+P F D+ + F+ A + + L L+PF+LRR
Sbjct: 557 QNNLKELASLVNFLMPGKFYIRDELN--FDQPNAEQERD-IRDLQERLQPFILRRLKKDV 613
Query: 353 XXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVNGAGKVE-KMRLQNILMQLRKCCNH 411
LS MQ EWY +L K+ + G ++ L NI+++L+K NH
Sbjct: 614 EKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNH 673
Query: 412 PYLFDGAEP----GPPYTTDEHL---VYNCGKLTILDKLLPKLQEQESRVLIFSQMTRML 464
PYLF GA G T ++ L + N GK+ +LDKLL +L+ RVLIFSQM RML
Sbjct: 674 PYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRML 733
Query: 465 DILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSAD 524
+IL +Y R Y Y RLDG P R I+ +N S FVF+LSTRAGGLGINL +AD
Sbjct: 734 NILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTAD 793
Query: 525 VVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVI 584
VII+DSDWNPQ DLQAM RAHRIGQK V V+R ++ +TVEE I+ERA K+ L+ +I
Sbjct: 794 TVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAII 853
Query: 585 QSGRLVDTKNQLN----KDEMLNMIRHGANHVFASKDSE--VTDEDIDTILAKGESKTEE 638
G +KN N E+ +++ GA+++F + +++ + + ++D IL+ E +
Sbjct: 854 SLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKLENMNLDDILSHAEDRDSS 913
Query: 639 LKQKLESL-GESSLRAFSM 656
S+ GE L+ F +
Sbjct: 914 NDVGGASMGGEEFLKQFEV 932
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 411 bits (1011), Expect = e-115
Identities = 224/545 (41%), Positives = 320/545 (58%), Gaps = 27/545 (4%)
Query: 111 NSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISL 170
NS+ K + E P YI GE+RD+Q+ G+NWM L+ NGILADEMGLGKT+QT++
Sbjct: 355 NSRPK-YRKLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAF 413
Query: 171 LGYMKHFKNVPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNT-----FIRE 225
L Y+ H GP +V+VP ST+ W W + + +G+ +R F +
Sbjct: 414 LSYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVD 473
Query: 226 TLMPGNWDVCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRL 285
+++ +T+YE +++++SV W+YM IDEAHR+KN +S L E L +FK+ NRL
Sbjct: 474 GTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRL 533
Query: 286 LLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSR-LHAVLRPFL 344
L+TGTPLQNN+ EL AL++FL+P F ++ N A + + R L L+P++
Sbjct: 534 LITGTPLQNNIRELAALVDFLMPGKFEIREEI----NLEAPDEEQEAYIRSLQEHLQPYI 589
Query: 345 LRRXXXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVNGA-GKVEKMRLQNILM 403
LRR LS +Q WY +L ++ V+ + ++ L NI++
Sbjct: 590 LRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVV 649
Query: 404 QLRKCCNHPYLFDGAEPG------PPYTTDE---HLVYNCGKLTILDKLLPKLQEQESRV 454
+L+K NHPYLFDG E DE L+ N GK+ +LDKLL +L+ RV
Sbjct: 650 ELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRV 709
Query: 455 LIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAG 514
LIFSQM RMLDIL DY R Y + RLDG P R I+ +N S FVF+LSTRAG
Sbjct: 710 LIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAG 769
Query: 515 GLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAE 574
GLGINL +AD VII+DSDWNPQ DLQAM RAHRIGQK V V+RL++ +T+EE ++ERA
Sbjct: 770 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERAR 829
Query: 575 VKLRLDKLVIQSGRLVDTKNQLN----KDEMLNMIRHGANHVFASKDSE--VTDEDIDTI 628
K+ L+ +I G KN N +E+ +++ GA+++F +++++ + D ++D I
Sbjct: 830 RKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMFKAENNQKKLEDMNLDEI 889
Query: 629 LAKGE 633
L E
Sbjct: 890 LEHAE 894
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 338 bits (830), Expect = 3e-93
Identities = 197/523 (37%), Positives = 293/523 (56%), Gaps = 30/523 (5%)
Query: 116 TIFRFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMK 175
T + + P +IK G + YQ++GLNW+ + ILADEMGLGKT+Q IS + +
Sbjct: 540 TNLEWHSQPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVL- 598
Query: 176 HFKNVPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWD-- 233
+++ P +VIVP +T+ NW E KKW P L+ L+G ++ R+ +R+ + D
Sbjct: 599 FYRHKCFPVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRS-LVRDYRLINQKDPK 657
Query: 234 -----VCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLT 288
V + S + RE S+ +KF W+ +++DE R+KN++S L L KS +LLLT
Sbjct: 658 HVSTHVLVISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLT 717
Query: 289 GTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSRLHAVLRPFLLRRX 348
GTPLQNN+ EL+ LL FL P N+++ ++ D + V+ LH +L+PF LRR
Sbjct: 718 GTPLQNNVRELFNLLQFLNPMKINAAE-----LEKRYSIIDTEKVTELHQILKPFFLRRV 772
Query: 349 XXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVV---------NGAGKVEKMRLQ 399
++ +Q+ Y +L K++ ++ + +G L
Sbjct: 773 KSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTTSLN 832
Query: 400 NILMQLRKCCNHPYLF--DGAEPGPPYTTDEHLVYNCG-KLTILDKLLPKLQEQESRVLI 456
NILMQLRK HPY++ D + PY + K IL L+PKL + R+L+
Sbjct: 833 NILMQLRKTLAHPYIYSPDIEDRNLPYELAMRSLEEASCKFLILRLLVPKLITRGHRILL 892
Query: 457 FSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGL 516
FSQ + LDILED+ ++ Y R DG + +R I+ +N SE F+LSTRAGG+
Sbjct: 893 FSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGV 952
Query: 517 GINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVK 576
GINL SAD VII D D+NP D+QA+ RAHR GQKK+V VF L T ++VEEKI++ A+ K
Sbjct: 953 GINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKK 1012
Query: 577 LRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVFASKDSE 619
L LD L+++S +D + KD + +++RHGA +F E
Sbjct: 1013 LVLDHLIVES---LDQNHNSEKD-LESILRHGARALFEEAGDE 1051
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 226 bits (553), Expect = 1e-59
Identities = 184/585 (31%), Positives = 268/585 (45%), Gaps = 75/585 (12%)
Query: 129 NGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGY-----MKHFKNVPGP 183
+ ++R YQ G+NW+ L + ++GIL D+MGLGKTLQTI ++ K F+ P
Sbjct: 1355 SADLRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSP 1414
Query: 184 HIVIVPK-----STLT-NWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCIT 237
VP STL +W E + P LK +G R IR + DV +T
Sbjct: 1415 KFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAK-IRSKMKKS--DVVVT 1471
Query: 238 SYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLH 297
SY++ + K +W Y V+DE H IKN ++KL++ ++ +S +RL+L+GTP+QNN+
Sbjct: 1472 SYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVL 1531
Query: 298 ELWALLNFLLPDVFNSSDDFDSWF-NTNAALGDNQLVSR-----------LHAVLRPFLL 345
ELW+L +FL+P + F F AA D + S+ +H + PF+L
Sbjct: 1532 ELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFML 1591
Query: 346 RRXXXXXXXXXXXXXXXXXXXGLSKMQREWYTKVL--------MKDIDVVNGAG----KV 393
RR +S +QR+ + ++D + G K
Sbjct: 1592 RRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKS 1651
Query: 394 EKMRLQNILMQLRKCCNHPYL-FDGAEPGPPYTTDEHLVYNCG--------KLTILDKLL 444
+K + L +RK CNHP L P + N G KLT L +LL
Sbjct: 1652 QKAHIFQALQYMRKLCNHPALILTEKHPKRNAIVKQLAKENSGLHDLKHAPKLTALGQLL 1711
Query: 445 PKLQEQESRV------------------LIFSQMTRMLDILEDYCL---WRQYKYCRLDG 483
S V LIF Q+ MLD++E L Y RLDG
Sbjct: 1712 RDCGLGNSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDG 1771
Query: 484 QTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMD 543
R + ++N + S V +L+T GGLG+NLT AD VI + DWNP DLQAMD
Sbjct: 1772 SVEPTKRQEAVTKFNNDPSID-VLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMD 1830
Query: 544 RAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLN 603
RAHRIGQKK V V+RLIT +EEKI+ K+ + V+ + + D++L+
Sbjct: 1831 RAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNA--GLSSIGTDQILD 1888
Query: 604 MIRHGANHVFASKDSEVTDEDIDTILAKGESKTEELKQKLESLGE 648
+ A+ + E+ + +G S T K+ LE L E
Sbjct: 1889 LFNTTADE--QQTVQNIDKEESEDAAGRGLSGTS--KKALEGLPE 1929
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 226 bits (553), Expect = 1e-59
Identities = 124/309 (40%), Positives = 176/309 (56%), Gaps = 20/309 (6%)
Query: 126 YIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGPHI 185
++ G +R+YQ GL W+ +L+++ NGILADEMGLGKT+QTI+LL ++ K GPH+
Sbjct: 441 FLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGPHL 500
Query: 186 VIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIRE 245
+IVP S + NW EFKK+ P K + G+ + R P W VCITSY++++++
Sbjct: 501 IIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQLVLQD 560
Query: 246 KSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNF 305
F++ W+YM++DEAH IKN +S+ + L F + +RLLLTGTPLQNNL ELW+LL F
Sbjct: 561 HQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELWSLLYF 620
Query: 306 LLP-------DVFNSSDDFDSWFN--TNAALGDNQ--------LVSRLHAVLRPFLLRRX 348
L+P F + DF WF+ + + + Q V++LH VLRP+LLRR
Sbjct: 621 LMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVLRPYLLRRL 680
Query: 349 XXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMK-DIDVVNGAGKVEKMRLQNILMQLRK 407
LSK QR Y + + + +G M + N LMQLRK
Sbjct: 681 KTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRARTREILASGNF--MSIINCLMQLRK 738
Query: 408 CCNHPYLFD 416
CNHP L +
Sbjct: 739 VCNHPNLHE 747
Score = 179 bits (436), Expect = 2e-45
Identities = 103/227 (45%), Positives = 139/227 (61%), Gaps = 9/227 (3%)
Query: 430 LVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHED 489
L Y+CGKL +LD+LL L RVLIF+QMT++LDILE + ++Y RLDG T E
Sbjct: 986 LQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQ 1045
Query: 490 RNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIG 549
R E +N + VF+LSTR+GGLGINLT AD VI YDSDWNPQ+D QA DR+HRIG
Sbjct: 1046 RQILTERFNNDDKIP-VFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIG 1104
Query: 550 QKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMI---R 606
Q + V ++RLI++ TVE ++ RA K LDK+VIQ G T K ++L++
Sbjct: 1105 QTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEF--TTEWFRKADVLDLFDLDD 1162
Query: 607 HGANHVFASKDSEVT--DEDIDTILAKGESKTEELKQKLESLGESSL 651
V A DS T +E+ + LA E + E+++ + ES+L
Sbjct: 1163 ESLKKVKADSDSGSTKNEENWEVALAAAEDE-EDVQAAQVARKESAL 1208
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 224 bits (548), Expect = 4e-59
Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 23/314 (7%)
Query: 131 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPK 190
++++YQ++GLNW+ +LYE GINGILADEMGLGKT+Q+IS++ Y+ N+ GP +VI P
Sbjct: 841 KLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPA 900
Query: 191 STLTNWMNEFKKWCPSLKAVCLIGDQETRNT----FIRETLM---PGNWDVCITSYEMII 243
STL NW E ++ P LK + G + R + R+ + + V +TSY++++
Sbjct: 901 STLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVV 960
Query: 244 REKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALL 303
+ F+ W+YM++DEA IK+ S + L FK NRLLLTGTP+QN + ELWALL
Sbjct: 961 LDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALL 1020
Query: 304 NFLLPDVFNSSDDFDSWFN--------TNAALGDNQLVSRLHAVLRPFLLRRXXXXXXXX 355
+F++P +F+S ++F WF+ +N L + QL RLH +L+PF+LRR
Sbjct: 1021 HFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQL-KRLHMILKPFMLRRVKKNVQSE 1079
Query: 356 XXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVN------GAGKVEKMRLQNILMQLRKCC 409
L++ Q+ Y + L + I + G + N++MQ RK C
Sbjct: 1080 LGEKIEKEVYCDLTQRQKILY-QALRRQISIAELLEKAILGGDDTVASIMNLVMQFRKVC 1138
Query: 410 NHPYLFDGAEPGPP 423
NHP LF+ + P
Sbjct: 1139 NHPDLFEREDVRSP 1152
Score = 190 bits (462), Expect = 1e-48
Identities = 95/175 (54%), Positives = 121/175 (69%), Gaps = 1/175 (0%)
Query: 431 VYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDR 490
+ + GKL+ LDKLL +L+ + RVLI+ QMTRM+D++E+Y +RQYKY RLDG + R
Sbjct: 1425 IADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQR 1484
Query: 491 NRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQ 550
+ E+ E FVF+LSTRAGGLGINLT+AD VI YDSDWNP +D QAMDRAHRIGQ
Sbjct: 1485 RDMVTEWQTR-PELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQ 1543
Query: 551 KKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMI 605
+KQV V+R IT T+EE+IV RA+ K + K+VI G TK K M+
Sbjct: 1544 QKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGETRPTKQMDLKGNSREMV 1598
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/19 (47%), Positives = 17/19 (89%)
Query: 42 RSKRFDFLLKQTEIFSHFM 60
++++ DFL+ QTE++SHF+
Sbjct: 727 QARKLDFLITQTELYSHFV 745
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 190 bits (464), Expect = 6e-49
Identities = 155/512 (30%), Positives = 234/512 (45%), Gaps = 60/512 (11%)
Query: 132 MRDYQVRGLNWMISLYENGI----NG-ILADEMGLGKTLQTISLLG-YMKHFKNVPGPHI 185
+R +Q+ G+ ++ I NG I+ADEMGLGKTLQ I+LL +K P I
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 186 ----VIVPKSTLTNWMNEFKKWC------------PSLKAVCLIGDQETRNTFIRETLMP 229
+ P S + NW NE KW S K ++ Q+ + R+ P
Sbjct: 324 EKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTRP 383
Query: 230 GNWDVCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTG 289
V I SYE + ++ DE HR+KN S L + R++L+G
Sbjct: 384 ----VLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRRVILSG 439
Query: 290 TPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALG------------DNQLVSRLH 337
TP+QN+L E ++LLNF P + S +F + G + ++ L
Sbjct: 440 TPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAKLAELA 499
Query: 338 AVLRPFLLRRXXXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMK-DID-VVNGAGKVEK 395
++ F++RR LS+ Q Y + +I+ ++ G G
Sbjct: 500 KIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINKILRGTGS--- 556
Query: 396 MRLQNILMQLRKCCNHPYLF------DGAEP-GPPYTTDEHLVYN--------CGKLTIL 440
L+ I + L+K CNHP L +G E PP L GK+ +L
Sbjct: 557 QPLKAIGL-LKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLSGKMLVL 615
Query: 441 DKLLPKL-QEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNM 499
+++L ++ QE + ++++ S T LD+ E C R YK RLDG R R ++ +N
Sbjct: 616 ERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFND 675
Query: 500 EGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRL 559
+ FVF+LS++AGG GINL A+ +I++D DWNP D QA+ R R GQKK V+R
Sbjct: 676 PEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRF 735
Query: 560 ITDNTVEEKIVERAEVKLRLDKLVIQSGRLVD 591
I T+EEKI +R K L V+ + V+
Sbjct: 736 IATGTIEEKIFQRQSHKQSLSSCVVDEAQDVE 767
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 188 bits (459), Expect = 3e-48
Identities = 130/368 (35%), Positives = 190/368 (51%), Gaps = 23/368 (6%)
Query: 234 VCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQ 293
+ IT+Y + + W Y V+DE H+I+N S++S ++ +++NR++L+GTP+Q
Sbjct: 415 ILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQ 474
Query: 294 NNLHELWALLNFLLPDVFNSSDDFDSWFN--------TNAALGDNQLVSRLHAVLR---- 341
NNL ELW L +F+ P + F + F NA+ Q + +LR
Sbjct: 475 NNLTELWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLIS 534
Query: 342 PFLLRRXXXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLM-KDID-VVNGAGKVEKMRLQ 399
P+LLRR L+ +QR+ Y L D+ ++NG ++ L
Sbjct: 535 PYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKAYQDFLQGSDMQKILNG----KRQMLY 590
Query: 400 NILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKLTILDKLLPKLQEQESRVLIFSQ 459
I + LRK CNHP L + GKL ++ LL ++Q R L+FSQ
Sbjct: 591 GIDI-LRKICNHPDLVTREYLLHKEDYNYGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQ 649
Query: 460 MTRMLDILEDYCL-WRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKF-VFMLSTRAGGLG 517
+MLDILE YCR+DG T R ++ +N +E F VF+L+TR GGLG
Sbjct: 650 TRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVDNFNK--NEYFDVFLLTTRVGGLG 707
Query: 518 INLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKL 577
+NLT AD VI++D DWNP D QA +RA R+GQKK V V+RL+T T+EEKI R K
Sbjct: 708 VNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQ 767
Query: 578 RLDKLVIQ 585
L +++
Sbjct: 768 FLTNKILK 775
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 135 YQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPKSTLT 194
YQV + W+ LY GI+ DEMGLGKT+Q +S L + H P +++ P + +
Sbjct: 280 YQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPALIVCPATLMK 339
Query: 195 NWMNEFKKWCPSLKAVCL 212
W+NEF W L+ V L
Sbjct: 340 QWVNEFHTWWAPLRVVVL 357
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 186 bits (453), Expect = 1e-47
Identities = 145/516 (28%), Positives = 237/516 (45%), Gaps = 37/516 (7%)
Query: 150 GINGILADEMGLGKTLQTISLL------GYMKHFKNVPGPHIVIVPKSTLTNWMNEFKKW 203
G + ILADEMGLGKTLQTI+++ Y + + +V+ P + L NW NEF W
Sbjct: 228 GYSAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNW 287
Query: 204 CPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIRE-KSVFKKFNWRYMVIDEA 262
+ I F +E + + IT YE + ++ + ++ DEA
Sbjct: 288 LGHERIHVYIA--RCAEDF-QEFTSNKTYSIIITGYETVCTYLRNYGCGIDIDLLICDEA 344
Query: 263 HRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWF- 321
HR+K+ S+ L + K+ RLLLTGTPLQN+L E ++++NF++P + + F + +
Sbjct: 345 HRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYE 404
Query: 322 -------NTNAALGDNQL----VSRLHAVLRPFLLRRXXXXXXXXXXXXXXXXXXXGLSK 370
+ NA+ D L + RL F LRR +
Sbjct: 405 RPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTH 464
Query: 371 MQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCCNHPYL-------FDGAEPGPP 423
Q Y VL V+ G K IL +L K CN L F E
Sbjct: 465 QQENVYGHVLDGFKSSVDQKGYYLK-----ILTRLSKICNSTILLRNEKENFLSTELQDK 519
Query: 424 YTTD-EHLVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLD 482
+ + E+++ + KL IL LL Q + +I SQ L+++E + ++C+L
Sbjct: 520 HVFEQENMLLSSSKLQILAALLKSFQRGCQKAVIVSQYKETLELIELFLSILHVRFCKLL 579
Query: 483 GQTPHEDRNRQIEEYNMEGSEKF-VFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQA 541
G TP +R+ + +N ++F V +LS++AGG G+NLT + +IIY+ WNP DLQA
Sbjct: 580 GSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQA 639
Query: 542 MDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEM 601
+ R +R GQK+ V ++ ++ ++E+I R K L I S KN +++
Sbjct: 640 LSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSD-ASQKKNFFTGEDI 698
Query: 602 LNMIRHGANHVFASKDSEVTDEDIDTILAKGESKTE 637
+ + + + ++ID++ K + T+
Sbjct: 699 KTLFSYSKTETCLTYELAFDSDEIDSLTKKKDPLTK 734
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 170 bits (414), Expect = 7e-43
Identities = 112/305 (36%), Positives = 159/305 (52%), Gaps = 23/305 (7%)
Query: 124 PHYIKNG-EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPG 182
P I +G ++ YQ+ GLNW+ +Y+ ++GILADEMGLGKT Q IS L +K K +
Sbjct: 405 PSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLKE-KGIQN 463
Query: 183 PHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMI 242
H+V+VP STL NW+ EF+K+CPSL+ G Q R R LM ++DV +T+Y++
Sbjct: 464 RHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERINK-RYYLMDTDFDVLVTTYQLA 522
Query: 243 IR---EKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHEL 299
++S +K + + DE H +KN S+ + L + RLL+TGTPLQNNL EL
Sbjct: 523 SGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANFRLLITGTPLQNNLKEL 582
Query: 300 WALLNFLLPDVF-NSSDDFDSWFNTNAAL-GD-------NQLVSRLHAVLRPFLLRRXXX 350
+LL F+LP VF N+ D + GD + +SR ++ PF+LRR
Sbjct: 583 ISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQERISRAKTIMNPFILRRRKE 642
Query: 351 XXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCCN 410
+ + Q Y VL ++VN +NILMQLRK
Sbjct: 643 NVLSDLPPKIQHVEYCHMEETQLSLYLSVLELK-NLVNA-------NRENILMQLRKAAL 694
Query: 411 HPYLF 415
H LF
Sbjct: 695 HQLLF 699
Score = 133 bits (322), Expect = 1e-31
Identities = 71/145 (48%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
Query: 436 KLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIE 495
K+ L LL K + E R+LIFSQ T++LDILE ++ RLDG TP E R + I+
Sbjct: 766 KVKKLCSLLKKSRPNE-RILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLID 824
Query: 496 EYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVR 555
+++ + K VF+LST++GG GINLT A++VI++D +NP D+QA DRAHR+GQ + V
Sbjct: 825 DFHTNENYK-VFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVH 883
Query: 556 VFRLITDNTVEEKIVERAEVKLRLD 580
V+RLIT NT+EE I A KL L+
Sbjct: 884 VYRLITKNTIEENIRRLANTKLTLE 908
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 169 bits (412), Expect = 1e-42
Identities = 113/312 (36%), Positives = 163/312 (52%), Gaps = 29/312 (9%)
Query: 131 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPK 190
+++ YQ+ G+NW+ LY+ ++GILADEMGLGKT Q ++ + + GPH+V+VP
Sbjct: 549 QLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLE-QGHHGPHLVVVPS 607
Query: 191 STLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGN--WDVCITSYEMIIREK-- 246
STL NW+ E ++CPSL+ G Q+ R IRE + +D+ +T+Y++ K
Sbjct: 608 STLENWLRELARFCPSLRVEPYYGSQQERAN-IREAIEENEIKYDILVTTYQLATNNKED 666
Query: 247 -SVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNF 305
S K N+ V DE H +KN S+ + L + RLLLTGTPLQNNL EL +LL F
Sbjct: 667 RSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVSLLAF 726
Query: 306 LLPDVFNSS-DDFDSWF--------NTNAALGDNQLVSRLHAVLRPFLLRRXXXXXXXXX 356
+LP++F+S DD D F + AL Q +SR ++ PF+LRR
Sbjct: 727 ILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQRISRAKTMMTPFVLRRRKNQVLNDL 786
Query: 357 XXXXXXXXXXGLSKMQREWYTK--VLMKD-----IDVVNGAGKVEK------MRLQNILM 403
LS+ Q E Y + L K+ D N K ++ + ++LM
Sbjct: 787 PKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLM 846
Query: 404 QLRKCCNHPYLF 415
QLRK NH LF
Sbjct: 847 QLRKAANHALLF 858
Score = 160 bits (388), Expect = 1e-39
Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 1/187 (0%)
Query: 424 YTTDEHLVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDG 483
YT + + GK+ +L +LLPK++E+ SR+L+FSQ T+MLDILE + Y RLDG
Sbjct: 913 YTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDG 972
Query: 484 QTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMD 543
T E R I++++ E + VF+LST+AGG GINL A+VVI+YD +NP DLQA D
Sbjct: 973 STQVEVRQDIIDQFHKE-EDVTVFLLSTKAGGFGINLACANVVILYDCSYNPFDDLQAED 1031
Query: 544 RAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLN 603
RAHR+GQ ++V V RLITDNT+EE I + A KL LD + G+ + + +ML+
Sbjct: 1032 RAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSLSSDGKDREEIGERLVQDMLD 1091
Query: 604 MIRHGAN 610
+G N
Sbjct: 1092 EENNGNN 1098
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 161 bits (390), Expect = 6e-40
Identities = 111/313 (35%), Positives = 155/313 (49%), Gaps = 31/313 (9%)
Query: 131 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPK 190
+++DYQ+ G+NW+ LYE + GILADEMGLGKT QTI+ + KN+ GPH+VI P
Sbjct: 386 KLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMD-KNINGPHLVIAPA 444
Query: 191 STLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPG--NWDVCITSYEMIIREKS- 247
ST+ NW+ EF K+CP LK G Q R IRE + +++V +T+Y + K+
Sbjct: 445 STMENWLREFAKFCPKLKIELYYGSQVEREE-IRERINSNKDSYNVMLTTYRLAATSKAD 503
Query: 248 --VFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNF 305
+ + V DE H +KN S+ L + R+LLTGTPLQNNL EL +LL F
Sbjct: 504 RLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAF 563
Query: 306 LLPDVFN-SSDDFDSWF--------NTNAALGDNQLVSRLHAVLRPFLLRRXXXXXXXXX 356
+LP VF+ D F + AL Q VSR ++ PF+LRR
Sbjct: 564 ILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQRVSRAKMMMAPFVLRRKKSQVLDAL 623
Query: 357 XXXXXXXXXXGLSKMQREWY--------------TKVLMKDIDVVNGAGKVEKMRLQNIL 402
S+ +R Y V+ ++D K +K +L
Sbjct: 624 PKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAK-KKSTAGFVL 682
Query: 403 MQLRKCCNHPYLF 415
+QLRK +HP LF
Sbjct: 683 VQLRKLADHPMLF 695
Score = 126 bits (303), Expect = 2e-29
Identities = 67/159 (42%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Query: 436 KLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIE 495
K+ L KLL E RV++FSQ T++LDIL+ K+ R DG T + R I+
Sbjct: 762 KVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLID 821
Query: 496 EYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVR 555
++ + S VF+LST+AGG GINL A++VI+YD +NP DLQA DRAHR+GQKK+V
Sbjct: 822 QFYADESIN-VFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVT 880
Query: 556 VFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKN 594
V++ + +T+EE I A K+ LD + + V+ ++
Sbjct: 881 VYKFVVKDTIEEHIQRLANAKIALDATLSGNAETVEAED 919
>SPBC582.10c |||ATP-dependent DNA helicase Rhp16b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 106 bits (254), Expect = 2e-23
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 406 RKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKLTILDKLLPKLQEQES--------RVLIF 457
+KC + F + G D+ L Y K+ + K+L L EQE + +IF
Sbjct: 619 KKCKDCSRNFKELDKGIQDPNDKTL-YKSSKIREILKIL-SLDEQEEDDTVRGLRKTIIF 676
Query: 458 SQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLG 517
SQ T LDI++ + + R DG+ + R + ++ + + V + S + G LG
Sbjct: 677 SQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQ-VLLCSLKCGALG 735
Query: 518 INLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKL 577
+NLT A VI+ D WNP ++ QA+DR HRIGQ++ V V++L+ +NT+EEKIVE +K
Sbjct: 736 LNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQNLKR 795
Query: 578 RLDKLVIQSG-RLVDTKNQLNKDEML 602
L K + G + V T +L +++L
Sbjct: 796 DLAKQALGDGKKSVFTSKKLTLNDLL 821
Score = 97.1 bits (231), Expect = 1e-20
Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 54/326 (16%)
Query: 134 DYQVRGLNWMISLY----ENGINGILADEMGLGKTLQTISLL--GYMKHFKNVPGPHIVI 187
D+QV+GL W+ S + GILAD+MGLGKT+Q I+L+ + K+ +V+
Sbjct: 235 DHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSHPLPKKKHSIKSTLVV 294
Query: 188 VPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIRE-- 245
P S + W +E + K ++ +R ++ + +DV IT+Y++++ E
Sbjct: 295 APLSLIKQWESEVQT---KSKLTAIVYHGASRYKLLK---VIHEYDVVITTYQILVSEWV 348
Query: 246 ---------------KSVFKK------FNWRYMVIDEAHRIKNEKSKLSELLREFKSMNR 284
KS KK F W +++DEAH IKN+ SK + + +NR
Sbjct: 349 SHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKNKSSKSALACCALQGINR 408
Query: 285 LLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLV-SRLHAVLRPF 343
LTGTPLQNN+ EL++L+ FL + FN + + G+ LV RL +L
Sbjct: 409 WCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISLPLCQGEENLVFKRLRMLLSVI 468
Query: 344 LLRRXXXXXXXXXXXXXXXXXXXGLSK------------MQREWYTKV---LMKDIDVVN 388
+LRR LSK +R++Y+ + + + +
Sbjct: 469 MLRRTKTLLEANAGKDGTGGALK-LSKRLVYKVICKFEESERDFYSNLARNMERTMSNFV 527
Query: 389 GAGKVEK--MRLQNILMQLRKCCNHP 412
+GK+ K + +L++LR+ CNHP
Sbjct: 528 NSGKLGKNYTNILCLLLRLRQACNHP 553
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 99 bits (238), Expect = 2e-21
Identities = 56/170 (32%), Positives = 99/170 (58%), Gaps = 5/170 (2%)
Query: 433 NCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNR 492
N + TILD + K E ++L++SQ ++ L ++ ++ R DG R +
Sbjct: 726 NQARQTILDIIGSKRNE---KILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQK 782
Query: 493 QIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKK 552
+ +N + + V ++S +AG +G+NLT A+ VI+ + +NP ++ QA+DR HR+GQ+K
Sbjct: 783 SLHSFNND-KDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQK 841
Query: 553 QVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEML 602
V V+R IT +T+EE+IV K +L K + S + ++L+K+E+L
Sbjct: 842 PVTVYRFITKDTIEERIVSVQRKKRQLVKEALDSNE-NNPLSRLDKEELL 890
Score = 84.2 bits (199), Expect = 8e-17
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 135 YQVRGLNWMISLYENG-INGILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPKSTL 193
+QV G WM S+ ++ G++AD+MGLGKT+QTI+LL K + ++++V + L
Sbjct: 253 HQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPLRKTNLIVVSVALL 312
Query: 194 TNWMNEFK-KWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIREKSVFKKF 252
W E K PS K I T+ ++ +DV +T+Y M+ E F
Sbjct: 313 HQWAEELSTKVHPSKKLSVYIHHGSTKKNL--DSYELSQYDVVLTTYSMLAYEMKQNDAF 370
Query: 253 N-------------------WRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQ 293
N W +V+DEAH I+N + ++ + + R L+GTP+Q
Sbjct: 371 NNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTPIQ 430
Query: 294 NNLHELWALLNFL 306
N++ E ++LL FL
Sbjct: 431 NHIDEFYSLLKFL 443
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 97.5 bits (232), Expect = 8e-21
Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 395 KMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTD-EHLVYNCGKLTILDKLLPKLQEQES- 452
K+R +NI L K + + + + G TD +H + L+ + +++Q +
Sbjct: 827 KLRTENISELLPK--QYSNILENRQMGMKIFTDPKHWTTSTKIEKALNAVKEIIKKQPTD 884
Query: 453 RVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTR 512
++LIFSQ L++ KY G +RN+ + + ++ + + V ++S +
Sbjct: 885 KILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVR-VLLISLK 943
Query: 513 AGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVER 572
AG +G+NLT A+ VII D WNP ++ QA+DRAHRIGQ K V + R++T+NT+EE+++
Sbjct: 944 AGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLAL 1003
Query: 573 AEVKLRL 579
+ K L
Sbjct: 1004 QDRKREL 1010
Score = 89.4 bits (212), Expect = 2e-18
Identities = 87/324 (26%), Positives = 140/324 (43%), Gaps = 39/324 (12%)
Query: 132 MRDYQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPK 190
+ ++Q GL W+ L E+ G ILAD+MGLGKT+Q ++LL ++I P
Sbjct: 390 LMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTRPPESKSVKTTLIITPV 449
Query: 191 STLTNWMNEF-KKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIRE---- 245
S L W NE K PS + I ++ I E LM ++D+ +T+Y +I E
Sbjct: 450 SLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLM--SYDIVLTTYNVIAYEFKNK 507
Query: 246 ----KSV-----FKKFN--------WRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLT 288
KS+ KKF W +++DEA IKN + + +S R L+
Sbjct: 508 MAYDKSIEDNAPIKKFEHLPFFEAEWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLS 567
Query: 289 GTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFN--TNAALGDNQLVSRLHAVLRPFLLR 346
GTP+QN + E ++L+ FL ++ F F ++ + + + R +L+ LLR
Sbjct: 568 GTPMQNGVEEFYSLIKFLRIKPYSDWSSFSKDFTIPLSSNINTSAPMKRFRGLLKAVLLR 627
Query: 347 RXXXXX-----XXXXXXXXXXXXXXGLSKMQREWY------TKVLMKDIDVVNGAGKVEK 395
R LS + E+Y ++ M+ + G
Sbjct: 628 RTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKY-LQEGTITTHY 686
Query: 396 MRLQNILMQLRKCCNHPYLFDGAE 419
L +L++LR+ C HP+L E
Sbjct: 687 GSLLVLLLRLRQACCHPWLIVARE 710
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 93.1 bits (221), Expect = 2e-19
Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 444 LPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSE 503
L + +++ + ++FSQ T MLD++ + +LDG + R IE ++ + +
Sbjct: 803 LLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINI 862
Query: 504 KFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDN 563
+F++S +AGG+ +NLT A V + D WN + QAMDR HRIGQK+ ++V L +N
Sbjct: 863 T-IFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIEN 921
Query: 564 TVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEM 601
++E KI+E E K ++ I NQL+ ++M
Sbjct: 922 SIESKIIELQEKKAQMIHATIDQDE--KALNQLSVEDM 957
Score = 79.4 bits (187), Expect = 2e-15
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 26/195 (13%)
Query: 135 YQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPKSTL 193
+Q G+ W+ ++ G ILADEMG+GKT+QTI+LL K P +V+ P +
Sbjct: 360 FQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALLLSEPRGK----PTLVVAPVVAI 415
Query: 194 TNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMI----------- 242
W E + L Q R+ E ++DV +TSY +I
Sbjct: 416 MQWKEEIDTHTNKALSTYLYYGQ-ARDISGEEL---SSYDVVLTSYNVIESVYRKERSGF 471
Query: 243 ------IREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNL 296
++EKS+ + + +++DEAH IK+ + + ++ ++ L+GTPLQN +
Sbjct: 472 RRKNGVVKEKSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRI 531
Query: 297 HELWALLNFLLPDVF 311
EL++LL FL D F
Sbjct: 532 GELFSLLRFLRADPF 546
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 92.3 bits (219), Expect = 3e-19
Identities = 49/127 (38%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 450 QESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFML 509
+ +V+IFSQ T LDI+ D + Y R DG + R+ +E + + V ++
Sbjct: 980 EPEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALETFRNDPDVN-VLII 1038
Query: 510 STRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKI 569
S +AGG+G+NLT A+ V I D W+ ++ QA+DR HR+GQ+K V V R I +TVEE++
Sbjct: 1039 SLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERM 1098
Query: 570 VERAEVK 576
++ E K
Sbjct: 1099 LKIQERK 1105
Score = 72.1 bits (169), Expect = 4e-13
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 153 GILADEMGLGKTLQTISLLGYMKHFKNVPGPH----------------IVIVPKSTLTNW 196
GILADEMGLGKT++ +SL+ F P +V+ P S L W
Sbjct: 525 GILADEMGLGKTIEVLSLIHSRPCFSTDEIPEAFRHSKPSLPVASRTTLVVAPMSLLDQW 584
Query: 197 MNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWD--VCITSYEMIIRE------KSV 248
+E K K +I + ++ ++ + + ITSY +++ E S
Sbjct: 585 HSEACKVSQGTKFRSMIYYGSEKPLDLKSCVIDTSTAPLIIITSYGVLLSEFSQQSHSSG 644
Query: 249 FKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNFL 306
+W +V+DE H I+N +SK ++ S NR ++TGTP+ N L +L++L+ F+
Sbjct: 645 LFSVHWFRVVLDEGHNIRNRESKTAKACHSISSQNRWVITGTPIVNKLDDLYSLIKFM 702
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 60.9 bits (141), Expect = 9e-10
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 436 KLTILDKLLPKLQEQE--SRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQ 493
K+ + K L L+ E +V++FSQ +LD+L + R DG++ + R
Sbjct: 1187 KIDTISKHLLYLKHNELYPKVVVFSQWLDVLDVLHKSFEANGIVFIRFDGKSKNTCLKRF 1246
Query: 494 IEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQ 553
EE +++ V L R+ G+ LT+A V + + N +++QA+ R HRIGQ +
Sbjct: 1247 KEERSLQ-----VLTLHARSQSSGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRP 1301
Query: 554 VRVFRLITDNTVEEKIVERAEVK-LRLDKL 582
V+ I ++TVE I+ + K +LDKL
Sbjct: 1302 TFVYYYIVEDTVEGHILNLSLTKHEQLDKL 1331
Score = 52.0 bits (119), Expect = 4e-07
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 39/191 (20%)
Query: 153 GILADEMGLGKTLQTISLLGYMK---------HFKNVPGPHI-------VIVPKSTLTNW 196
GILADEMG+GKTL+ + L+ + + F V G ++ +I P + L W
Sbjct: 286 GILADEMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVVGKNVKYSKATLIITPSTILDQW 345
Query: 197 MNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSY-----EMIIRE------ 245
++E PSLK G +++ ++ + + D+ +TSY E++ E
Sbjct: 346 LSEIDLHVPSLKVFHYQGIRKSNG--LKSAKIFLDCDIVVTSYSDLRFELLYTESHSRTL 403
Query: 246 ---------KSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNL 296
KS W + +DEA ++ +S +++++ +N ++GTP+++ +
Sbjct: 404 RHEKRHVSPKSPLIDVCWWRICVDEAQMVETSQSNVAQMIYRIPRVNCWTVSGTPVRSEV 463
Query: 297 HELWALLNFLL 307
+L+ LL FLL
Sbjct: 464 DDLFGLL-FLL 473
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 508 MLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEE 567
+++T G G+++ D++I YD+ +P +Q M R G+KK +VF L+T++ +
Sbjct: 535 LVATSIGEEGLDIGDTDMIICYDASSSPIRTIQRMGRT---GRKKSGKVFVLLTEDCEDS 591
Query: 568 KIVERAEVKLRLDKLVIQSGRLVDTKNQL 596
K ER++V R + VI+SG+ + K +
Sbjct: 592 K-WERSQVSYRRVQKVIESGKKIALKKDV 619
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 41.1 bits (92), Expect = 8e-04
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 451 ESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLS 510
E LIF + RM D L DY L + + G +R R +E + S + M++
Sbjct: 430 EGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFR---SGRTSIMVA 486
Query: 511 TRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIV 570
T G+++ + VI YD + + + R R G Q F + + ++++
Sbjct: 487 TAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELI 546
Query: 571 E 571
E
Sbjct: 547 E 547
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 37.5 bits (83), Expect = 0.009
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 481 LDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQ 540
+ G P E+R ++ + + + +K + ++T G GI++ ++VI YD +P L
Sbjct: 325 IHGGLPQEERIKRYKAF--KDFDKRI-CVATDVFGRGIDIERVNIVINYDMPDSPDSYLH 381
Query: 541 AMDRAHRIGQKKQVRVFRLI-TDNTVEEKIVERAEVKL 577
+ RA R G K F D+ + +KI ER EV +
Sbjct: 382 RVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNI 419
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 34.3 bits (75), Expect = 0.088
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 452 SRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLST 511
++ +IF R +D L + + + G+ P ++R+ ++++ S ++ T
Sbjct: 261 TQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSR---VLICT 317
Query: 512 RAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQK 551
GI++ +VI YD N + + + R+ R G+K
Sbjct: 318 DIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRK 357
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 34.3 bits (75), Expect = 0.088
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Query: 430 LVYNCGKLTILDKLLPK-LQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHE 488
+V N K L K + + L++++++VLIF+ R+ D + + + + G +
Sbjct: 347 VVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQD 406
Query: 489 DRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRI 548
+R+ + E+ + K M++T GI++ V YD N + + + R R
Sbjct: 407 ERDWVLNEFR---TGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRA 463
Query: 549 GQKKQVRVFRLITDNT--VEEKIVERAEVKLRLDKLVIQSGR 588
G K + +DN E + +E K +D + + R
Sbjct: 464 GAKGTAYTY-FTSDNAKQARELVSILSEAKQDIDPKLEEMAR 504
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 452 SRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLST 511
++ +IF R +D L + R + + G R+ + E+ GS + +++T
Sbjct: 259 TQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRT-GSSRI--LITT 315
Query: 512 RAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQK 551
GI++ +VI YD N + + + R R G+K
Sbjct: 316 DLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRK 355
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 481 LDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQ 540
+ G E R R +E++ +G K ++L+T GI++ +VVI Y++ ++ L
Sbjct: 534 IHGSLSQEQRVRALEDFR-DG--KCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLH 590
Query: 541 AMDRAHRIGQ 550
+ R R G+
Sbjct: 591 RVGRTARAGR 600
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 483 GQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAM 542
G E+R + + + K M++T+A GLGIN +V+ Y + +Q
Sbjct: 1451 GDVSDEERQMNFDAFR-NANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQET 1509
Query: 543 DRAHRIGQKKQVRVFRLITDNT 564
RA R G+ +F D+T
Sbjct: 1510 GRAGRDGKYAIAALFYEKYDST 1531
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 483 GQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAM 542
G E+R + + + K M++T+A GLGIN +V+ Y + +Q
Sbjct: 1451 GDVSDEERQMNFDAFR-NANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQET 1509
Query: 543 DRAHRIGQKKQVRVFRLITDNT 564
RA R G+ +F D+T
Sbjct: 1510 GRAGRDGKYAIAALFYEKYDST 1531
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 436 KLTILDKLLPKL--QEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQ 493
K + L +LL +L + + R L+F D L + R Y + G DR+
Sbjct: 651 KFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDST 710
Query: 494 IEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIG 549
I +Y + F +++T G+++ S +V+ YD + + + + R R G
Sbjct: 711 ISDYK---AGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAG 763
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/80 (22%), Positives = 33/80 (41%)
Query: 480 RLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDL 539
RL G + R + ++ +L T G++L + D+V+ YD+ ++ L
Sbjct: 472 RLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYL 531
Query: 540 QAMDRAHRIGQKKQVRVFRL 559
+ R R G +F L
Sbjct: 532 HRIGRTARAGHNGAAIMFLL 551
>SPBC3H7.10 |||elongator homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 29.5 bits (63), Expect = 2.5
Identities = 8/30 (26%), Positives = 21/30 (70%)
Query: 379 VLMKDIDVVNGAGKVEKMRLQNILMQLRKC 408
++++DID++ ++ ++Q +++LRKC
Sbjct: 126 IIIEDIDILQSTHALDSTKIQQAILELRKC 155
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 28.7 bits (61), Expect = 4.4
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 436 KLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIE 495
K+ L+ L KLQ +S +IF T +++L Y + RNR
Sbjct: 268 KVHCLNTLFSKLQINQS--IIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFH 325
Query: 496 EYNMEGSEKFVFM-LSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQK 551
+ V L TR GI++ + +VVI +D N + L + R+ R G +
Sbjct: 326 NFRNGVCRNLVCSDLLTR----GIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHR 378
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 813 IKANEKYGRDDIENIA--KDVEGKTPEEVMEYSAVFWERCHELQDIDRIMGQIERGEAKI 870
I+ EK R++ E+I+ K+ K +E+ + S + ++CHE ++ + + +E K
Sbjct: 580 IEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKA 639
Query: 871 QRRASIK 877
+ ++ K
Sbjct: 640 KEDSTSK 646
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 853 LQDIDRIMGQIERGEAKIQRRASIKKALDAKMARYRAPFHQLRISYG 899
+ D D + Q++R + + + + DA++ RY A HQL S G
Sbjct: 741 VMDEDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRG 787
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 858 RIMGQIERGE-AKIQRRASIKKALDAKMARYRAPFHQLRISYGTNKGKNYVEEED 911
R M I R E +I R +++ A + K + P + +S+ + KNY ++ED
Sbjct: 614 RCMWNILRVEHEEIYNRENLRAARELKPLDFVKPHSDVFVSHQISSDKNYTDDED 668
>SPAC343.06c |||scramblase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 197 MNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIREKSVFKKF-NWR 255
+N W S + I + +T + E L W + YE+ + ++S+F++F
Sbjct: 151 LNRPFSWINSRLQIHSIDYSKFSSTLVGEVLQ--KWHLWRRRYELFLAKRSMFEQFAKID 208
Query: 256 YMVIDEAHRIKNEKSK-LSELLREFKSMNRLLLTGT 290
V+ ++NE+ + L + R F + R T T
Sbjct: 209 ERVLSWEFLLRNEQDRILGSVSRNFMGLPREFFTDT 244
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 900 TNKGKNYVEEEDRFLVCMLHKLGFDKENVYEELRA--AVHSAPQFRFDWFLKSRTAV 954
+ + K +E+ + + K F ENV E A H PQ RF+ FLK + +
Sbjct: 100 SKRWKRLLEDPGIWKALYMQKGWFVNENVLNEFEAWRRTHKFPQPRFENFLKQQNII 156
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,268,379
Number of Sequences: 5004
Number of extensions: 177510
Number of successful extensions: 683
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 558
Number of HSP's gapped (non-prelim): 77
length of query: 1026
length of database: 2,362,478
effective HSP length: 80
effective length of query: 946
effective length of database: 1,962,158
effective search space: 1856201468
effective search space used: 1856201468
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -