Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000930-TA|BGIBMGA000930-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal, IPR001005|Myb,
DNA-binding, IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR009057|Homeodomain-like, IPR000330|SNF2-related
(1026 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.) 480 e-135
SB_621| Best HMM Match : SNF2_N (HMM E-Value=0) 393 e-109
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 360 3e-99
SB_56919| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00038) 336 7e-92
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 237 2e-62
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 210 6e-54
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 6e-51
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 196 8e-50
SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32) 182 1e-45
SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42) 146 1e-34
SB_46815| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 4e-34
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 140 5e-33
SB_21827| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 6e-31
SB_47493| Best HMM Match : Helicase_C (HMM E-Value=1.3e-16) 129 1e-29
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 1e-27
SB_56356| Best HMM Match : Helicase_C (HMM E-Value=1.3e-21) 122 1e-27
SB_46182| Best HMM Match : Helicase_C (HMM E-Value=7.5e-22) 115 2e-25
SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24) 110 5e-24
SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0) 107 3e-23
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 95 3e-19
SB_21828| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 3e-15
SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0) 71 6e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 66 2e-10
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-10
SB_3329| Best HMM Match : SNF2_N (HMM E-Value=1.5e-07) 63 1e-09
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 59 2e-08
SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003) 59 2e-08
SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095) 58 5e-08
SB_35887| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-07
SB_44470| Best HMM Match : SNF2_N (HMM E-Value=1.2e-17) 52 2e-06
SB_54314| Best HMM Match : DEAD (HMM E-Value=0.48) 52 3e-06
SB_33711| Best HMM Match : PSCyt1 (HMM E-Value=9) 40 0.008
SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 38 0.041
SB_58947| Best HMM Match : Helicase_C (HMM E-Value=0.058) 37 0.072
SB_4355| Best HMM Match : DUF1421 (HMM E-Value=6.6) 36 0.13
SB_39816| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.39
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.39
SB_30728| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.89
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 33 1.2
SB_51562| Best HMM Match : HARP (HMM E-Value=0.00049) 33 1.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.2
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 1.6
SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11) 32 2.7
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 32 2.7
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 32 2.7
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 32 2.7
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 31 4.8
SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22) 31 6.3
SB_43947| Best HMM Match : efhand (HMM E-Value=2e-11) 31 6.3
SB_24838| Best HMM Match : NCD1 (HMM E-Value=2.3e-32) 31 6.3
SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18) 31 6.3
SB_1402| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.3
SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.3
SB_57245| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.3
SB_51310| Best HMM Match : NCD1 (HMM E-Value=2.3e-32) 31 6.3
SB_46095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.3
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.3
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 30 8.3
>SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 480 bits (1183), Expect = e-135
Identities = 228/328 (69%), Positives = 254/328 (77%), Gaps = 23/328 (7%)
Query: 93 HRHRKTXXXXXXXXXXXTNSKQKTIFRFEASPHYIKNGEMRDYQVRGLNWMISLYENGIN 152
HRHR+T T Q +I FE SP+YIK GEMRDYQVRGLNW+ISLYENGIN
Sbjct: 14 HRHRRTEQEEDEELLNQTKGAQTSILHFEESPNYIKGGEMRDYQVRGLNWLISLYENGIN 73
Query: 153 GILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCL 212
GILADEMGLGKTLQTISLLGYMK+F+NVPGPH+VI PKSTL NWM EF++WCPS++AVCL
Sbjct: 74 GILADEMGLGKTLQTISLLGYMKNFRNVPGPHMVICPKSTLANWMAEFERWCPSIRAVCL 133
Query: 213 IGDQETRNTFIRETLMPGNWDVCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKL 272
IG+QE R FIR+T++PG WDVC+TSYEM+IREK+VFKKF WRY+VIDEAHRIKNEKSKL
Sbjct: 134 IGNQEQRTAFIRDTMLPGEWDVCVTSYEMVIREKAVFKKFAWRYIVIDEAHRIKNEKSKL 193
Query: 273 SELLREFKSMNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQL 332
SE++RE +S NRLLLTGTPLQNNLHELWALLNFLLPDVF+SSD
Sbjct: 194 SEIVRELRSANRLLLTGTPLQNNLHELWALLNFLLPDVFSSSD----------------- 236
Query: 333 VSRLHAVLRPFLLRRXXXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVNGAGK 392
VLRPFLLRR GL+KMQR WYTK+LMKDIDVVNGAGK
Sbjct: 237 ------VLRPFLLRRLKSDVEKRLLPKKETKVYTGLTKMQRSWYTKILMKDIDVVNGAGK 290
Query: 393 VEKMRLQNILMQLRKCCNHPYLFDGAEP 420
+KMRL NILMQLRKCCNHPYLFDGAEP
Sbjct: 291 TDKMRLLNILMQLRKCCNHPYLFDGAEP 318
Score = 235 bits (576), Expect = 1e-61
Identities = 116/176 (65%), Positives = 139/176 (78%), Gaps = 3/176 (1%)
Query: 462 RMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQ--IEEYNMEGSEKFVFMLSTRAGGLGIN 519
R+L+IL + Y DG P R RQ I +NM GS KF+FMLSTRAGGLGIN
Sbjct: 295 RLLNILMQLRKCCNHPYL-FDGAEPDTSRERQAYINSFNMPGSTKFIFMLSTRAGGLGIN 353
Query: 520 LTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRL 579
L +AD+VI+YDSDWNPQ+DLQAMDRAHRIGQKKQV+VFR I+++TVEE+I+ERAE+KLRL
Sbjct: 354 LATADIVILYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFISESTVEERIIERAEMKLRL 413
Query: 580 DKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVFASKDSEVTDEDIDTILAKGESK 635
D +VIQ GRLVD ++ K+EML+MIRHGA VFASKD ++TDEDID ILAKGE K
Sbjct: 414 DAVVIQQGRLVDPNLKVGKEEMLSMIRHGAEAVFASKDEDITDEDIDAILAKGEKK 469
>SB_621| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1432
Score = 393 bits (967), Expect = e-109
Identities = 232/542 (42%), Positives = 317/542 (58%), Gaps = 48/542 (8%)
Query: 131 EMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPK 190
++RDYQ+ GLNW+ + + G + ILADEMGLGKT+Q IS L Y+ H ++ GP IV+VP
Sbjct: 126 KLRDYQLDGLNWLANSWCKGYSIILADEMGLGKTIQVISFLSYLCHTHSLFGPFIVVVPL 185
Query: 191 STLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIREKSVFK 250
ST+ W EF W L V +GD ITS R K
Sbjct: 186 STMAAWQREFVIWADQLNVVVYLGD--------------------ITS-----RNKQFLG 220
Query: 251 KFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNFLLPDV 310
NW +V+DEAHR+KN+ S L + L EF + +RLL+TGTPLQN+L ELWALL+FL+P+
Sbjct: 221 TINWAGLVVDEAHRLKNDDSLLYKALEEFHTNHRLLVTGTPLQNSLKELWALLHFLMPER 280
Query: 311 FNSSDDFDSWFNTNAALGDNQLVSRLHAVLRPFLLRRXXXXXXXXXXXXXXXXXXXGLSK 370
F+S + F+ +T D S LH L PFLLRR +S
Sbjct: 281 FSSWEAFEQIHSTQEQK-DKGFAS-LHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSS 338
Query: 371 MQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTD--E 428
+Q+++Y +L K+ +N K NI+M+L+KC NH L E PY D +
Sbjct: 339 LQKQYYRWILTKNYRALNKGLKGNSNTFLNIVMELKKCSNHASLTRPPE-NTPYGADALQ 397
Query: 429 HLVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHE 488
L+ GKL +LDKLL +L+E RVLIFSQM RMLDIL DY R++ + RLDG +
Sbjct: 398 TLIRGSGKLFLLDKLLVRLKETGHRVLIFSQMVRMLDILADYLQQRRFLFQRLDGSIRGD 457
Query: 489 DRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRI 548
R + ++ +N EGSE F F+LSTRAGGLGINL +AD VII+DSDWNPQ DLQA RAHRI
Sbjct: 458 LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRI 517
Query: 549 GQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQ----SGRLVDTK--------NQL 596
GQ+ QV ++RL++ +VEE I+ERA+ K+ LD L+IQ +GR V +K N
Sbjct: 518 GQRNQVNIYRLVSKGSVEEDIIERAKRKMVLDHLIIQRMDTTGRKVLSKTQNAPSSANPF 577
Query: 597 NKDEMLNMIRHGANHVFASKDSEVTDE----DIDTILAKGESKTEELKQKLESLGESSLR 652
NK+E+ ++++ GA +F D E ++ DID IL + E T + + +++G+ L
Sbjct: 578 NKEELASILKFGAEDLFKEGDGEHDEQLQAMDIDDILRRAE--TRDSDDQPQNIGDELLS 635
Query: 653 AF 654
F
Sbjct: 636 QF 637
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 360 bits (886), Expect = 3e-99
Identities = 207/527 (39%), Positives = 294/527 (55%), Gaps = 40/527 (7%)
Query: 119 RFEASPHYIKN--GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKH 176
R+E P Y+ G++ +YQ GLNW+ + G N ILADEMGLGKT+QTIS L +
Sbjct: 623 RYEKQPAYLDETGGKLHEYQREGLNWLRFSWAQGTNTILADEMGLGKTIQTISFLYSLMK 682
Query: 177 FKNVPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNT-------FIRETLMP 229
+ GP +V P STL NW EF+ W P + V GD+E+R T F +
Sbjct: 683 EGHSQGPFLVSAPLSTLVNWEREFEFWAPDMYVVTYAGDKESRATIRNFDFSFDEDAFKS 742
Query: 230 G------------NWDVCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLR 277
G + V +TSYE++ + + + +W +V+DEAHR+KN +SK L
Sbjct: 743 GLKAYKLKKDSPVKFHVLLTSYELVSIDSASLQSIDWAMLVVDEAHRLKNNQSKFFRTLS 802
Query: 278 EFKSMNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSRLH 337
++ +LLLTGTPLQNNL ELW LL FL P FN+ ++F + F+ N A D + +LH
Sbjct: 803 DYNIGYKLLLTGTPLQNNLEELWNLLFFLDPVEFNNKNNFLTEFD-NVAKEDQ--IKKLH 859
Query: 338 AVLRPFLLRRXXXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDIDVVNGAGKVEKMR 397
+L P +LRR LS MQ+++Y +L ++ + +N G +++
Sbjct: 860 DILGPHMLRRLKADVLKGIPSKSELIVRVELSPMQKKYYKWILTRNFEALNTKG-AQQVS 918
Query: 398 LQNILMQLRKCCNHPYLFDGAEPGPPYTTD-----EHLVYNCGKLTILDKLLPKLQEQES 452
L N++M+L+KCCNHPYLF A T L GKL +L K+L KL+EQ
Sbjct: 919 LLNVMMELKKCCNHPYLFHAAALEAKRTQSGGYEPNSLTEASGKLMLLVKMLKKLREQGH 978
Query: 453 RVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTR 512
RVLIFSQMTRMLD+LED+ YKY R+DG R I+ +N S+ F F+LSTR
Sbjct: 979 RVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSVNGAARQEAIDRFNAPTSQAFCFLLSTR 1038
Query: 513 AGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVER 572
AGGLGINL +AD V IYDSDWNP D+QA RAHRIGQ +V + ++
Sbjct: 1039 AGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQNNKVGI----------QQCSHC 1088
Query: 573 AEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVFASKDSE 619
+ K+ L LV++ G + ++K E+ ++++ G + +F D++
Sbjct: 1089 GKEKMMLTHLVVRPGLGSNKATIMSKSELDDILKFGTSELFKDDDTK 1135
>SB_56919| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00038)
Length = 459
Score = 336 bits (825), Expect = 7e-92
Identities = 158/224 (70%), Positives = 181/224 (80%), Gaps = 1/224 (0%)
Query: 744 DQEIYHYRKTLGYKVPRNPELGPDAAKIQREEQRKIDXXXXXXXXXXXXXXXXXXXGFTN 803
D+EIY +RK++GYKVP + E P+ Q+E Q+ ID GFTN
Sbjct: 25 DKEIYAFRKSIGYKVPLDIE-DPEGPDKQKEAQKLIDESEPLTEEEQSEKDQLLQEGFTN 83
Query: 804 WTKRDFNQFIKANEKYGRDDIENIAKDVEGKTPEEVMEYSAVFWERCHELQDIDRIMGQI 863
W+KR+FNQFIKA EKYGRDD++NI ++VEGKTP+EV EY+AVFWER ELQD++RIM QI
Sbjct: 84 WSKREFNQFIKACEKYGRDDMDNICQEVEGKTPQEVREYAAVFWERNDELQDLERIMAQI 143
Query: 864 ERGEAKIQRRASIKKALDAKMARYRAPFHQLRISYGTNKGKNYVEEEDRFLVCMLHKLGF 923
ERGE+KIQRR SIKKALDAKMARYR+PFHQLRI YGTNKGKNY EEEDRFL+CMLHKLGF
Sbjct: 144 ERGESKIQRRISIKKALDAKMARYRSPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKLGF 203
Query: 924 DKENVYEELRAAVHSAPQFRFDWFLKSRTAVELQRRCNTLITLI 967
+KENVY+ELR A SAPQFRFDWFLKSRTA ELQRRCNTLITLI
Sbjct: 204 EKENVYDELRMACRSAPQFRFDWFLKSRTAQELQRRCNTLITLI 247
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 237 bits (581), Expect = 2e-62
Identities = 117/237 (49%), Positives = 164/237 (69%), Gaps = 6/237 (2%)
Query: 396 MRLQNILMQLRKCCNHPYLFD-GAEP-GPPYTTDEHLVYNCGKLTILDKLLPKLQEQESR 453
+++ NILM LRKCCNHPYL + +P Y DE LV GK+ +LD+++P L+ + +
Sbjct: 1156 IKITNILMLLRKCCNHPYLLEYPLDPVTQQYKIDEELVRCSGKMLLLDQMVPALKRRGHK 1215
Query: 454 VLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRA 513
+LIFSQMT+MLDIL+DYC R Y+Y RLDG EDR +I+ + + EKF+F+LSTRA
Sbjct: 1216 ILIFSQMTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREEIDAFASD-PEKFIFLLSTRA 1274
Query: 514 GGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERA 573
GGLG+NL++AD VIIYDSDWNPQ DLQA DR HRIGQ K + V+RL+T NTV++KIVERA
Sbjct: 1275 GGLGLNLSAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPILVYRLVTSNTVDQKIVERA 1334
Query: 574 EVKLRLDKLVIQSGRLVDTK-NQLNKDEMLNMIRHGANHVFASKDSEVTDEDIDTIL 629
K +L+K+V +L T N L E+L H + + + + ++ +++++L
Sbjct: 1335 ASKRKLEKMVNSKAKLTGTTLNALQLKELLESSHH--DEIISKDEVILSQSELESLL 1389
Score = 211 bits (516), Expect = 2e-54
Identities = 113/283 (39%), Positives = 163/283 (57%), Gaps = 20/283 (7%)
Query: 124 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGP 183
P + G +R YQ+ G+ W+ LYENG+NGILADEMGLGKT+Q I L+ Y+ V GP
Sbjct: 805 PVLLTGGALRSYQLEGVEWLKGLYENGVNGILADEMGLGKTIQCIGLVSYLIEM-GVRGP 863
Query: 184 HIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLM---PGNWD---VCIT 237
+V P STL NW++EF+++ P + + G + R + R+ G ++ V +T
Sbjct: 864 FLVAAPLSTLPNWVSEFRRFSPQIPVILYHGSIQERTSLRRKITKLKKAGPFETMPVVVT 923
Query: 238 SYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLH 297
SYE+ + ++ + W++M++DE HRIKN +L L+ + S NRLLLTGTPLQNNL
Sbjct: 924 SYEIAMNDQKHLFQLMWKHMIVDEGHRIKNLNCRLIRELKSYNSANRLLLTGTPLQNNLA 983
Query: 298 ELWALLNFLLPDVFNSSDDFDSWFNTNAALG------------DNQLVSRLHAVLRPFLL 345
ELW+LLNFLLPD+F+ + F WF+ +A ++Q++ RLH++L PFLL
Sbjct: 984 ELWSLLNFLLPDIFDDLNSFQRWFDFSAINDEGGNEKIIAQEKEHQVLERLHSILTPFLL 1043
Query: 346 RRXXXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMKDI-DVV 387
RR L+ Q E+Y L K I D+V
Sbjct: 1044 RRLKTDVELSLPPKKEVLVRAPLTSKQTEFYRAALDKTILDIV 1086
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 210 bits (512), Expect = 6e-54
Identities = 132/360 (36%), Positives = 190/360 (52%), Gaps = 34/360 (9%)
Query: 119 RFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFK 178
+ E SP Y +R+YQ+ G+NW++ + N N ILADEMGLGKT+Q+I+ L M+ +
Sbjct: 565 KLETSPVYKDENTLREYQLEGVNWLMFCWCNRQNSILADEMGLGKTIQSIAFLFEMQRY- 623
Query: 179 NVPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITS 238
+ GP++VI P ST++NW EF+ W + AV G +R+ I
Sbjct: 624 GIRGPNLVIAPLSTISNWQREFESW-NDINAVVYHGSASSRH--------------LIQE 668
Query: 239 YEMIIREKSVFKKFN-----WRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQ 293
YE R++ V WR ++IDEAHR+KN KL E L + +R+LLTGTPLQ
Sbjct: 669 YEFYYRDEHVADNMQLSTVPWRAVIIDEAHRLKNRNCKLLEGLNNLQMEHRILLTGTPLQ 728
Query: 294 NNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSRLHAVLRPFLLRRXXXXXX 353
NN+ EL++LLNFL P F S F F L V +L +L+P +LRR
Sbjct: 729 NNVEELFSLLNFLEPSQFPSQGAFLMEFGD---LKTESQVDKLKQLLKPMMLRRLKEDVE 785
Query: 354 XXXXXXXXXXXXXGLSKMQREWYTKVLMKDID-VVNGAGKVEKM-RLQNILMQLRKCCNH 411
L+ +Q+++Y +L ++ + G + L N +M+LRKCCNH
Sbjct: 786 KNIAPKEETIIEVELTTVQKKFYRAILERNFAFLAKGTSSTANVPNLMNTMMELRKCCNH 845
Query: 412 PYLFDGAEPG--PPY---TTDEH---LVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRM 463
P+L GAE Y D H ++ GKL ++ KLLPKL+ +VL+FSQM +M
Sbjct: 846 PFLITGAEEKILQEYGREHVDRHTHAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMGQM 905
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 200 bits (487), Expect = 6e-51
Identities = 98/210 (46%), Positives = 137/210 (65%), Gaps = 1/210 (0%)
Query: 435 GKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQI 494
GK +LD++LPKL+ + RVL+F QMT ++ ILEDY W+ + Y RLDG T EDR + +
Sbjct: 513 GKFELLDRILPKLKRNKHRVLMFCQMTSLMTILEDYFNWKGFPYLRLDGTTKSEDRGQLL 572
Query: 495 EEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQV 554
+N + S FVF+LSTRAGGLG+NL +AD V+I+DSDWNP DLQA DRAHRIGQ+K+V
Sbjct: 573 SLFNAKDSPYFVFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQEKEV 632
Query: 555 RVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVFA 614
RV RL+T N+VEEKI+ A KL +D+ VIQ+G + L + N
Sbjct: 633 RVLRLMTVNSVEEKILAAARYKLNVDEKVIQAGMFNQNSTSSERKAFLMALLDTENDDDE 692
Query: 615 SKDSEVTDEDIDTILAKGESKTEELKQKLE 644
+ DE ++ ++A+ E + EL Q+++
Sbjct: 693 EESEVPDDETVNQMIARSEEEF-ELYQRMD 721
Score = 182 bits (443), Expect = 1e-45
Identities = 83/176 (47%), Positives = 119/176 (67%), Gaps = 2/176 (1%)
Query: 124 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGP 183
P + G +++YQ+ GL WM+SL+ N +NGILADEMGLGKT+QTI+L Y+ K + GP
Sbjct: 267 PSMLVGGRLKEYQLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGP 326
Query: 184 HIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMII 243
+VIVP STL+NW EF+KW PS V G R + L G ++V +T+YE ++
Sbjct: 327 FLVIVPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMRRS-AGAVLRTGKFNVVLTTYEYVM 385
Query: 244 REKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLR-EFKSMNRLLLTGTPLQNNLHE 298
R+K++ K W+YMV+DE HR+KN KL+++L + + +R+LLTGTPLQ L+E
Sbjct: 386 RDKAILAKVRWKYMVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQVELNE 441
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 196 bits (478), Expect = 8e-50
Identities = 94/219 (42%), Positives = 139/219 (63%), Gaps = 15/219 (6%)
Query: 126 YIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGPHI 185
++ G +R+YQ+ GL+W+++++E +NGILADEMGLGKT+QTISLL ++ K + GPH+
Sbjct: 778 FLLRGTLREYQLIGLDWLVTMHEKRLNGILADEMGLGKTIQTISLLAHLACEKGIWGPHL 837
Query: 186 VIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIRE 245
V+VP S + NW EFKKW P K + G+Q+ R + + VCITSY++++++
Sbjct: 838 VVVPTSVMLNWEMEFKKWLPGFKILTYYGNQKERKLKRQGWTKCNAFHVCITSYKLVVQD 897
Query: 246 KSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNF 305
F++ W+Y ++DE+ R + L F S RLLLTGTPLQN+L ELW+L++F
Sbjct: 898 HQAFRRKKWKYFILDESQR--------WQYLLNFNSQRRLLLTGTPLQNSLMELWSLMHF 949
Query: 306 LLPDVFNSSDDFDSWFN---TNAALGDNQ----LVSRLH 337
L+P +F S DF WF+ T G + LV RLH
Sbjct: 950 LMPHLFQSHKDFKEWFSNPLTGMIEGSREYNENLVKRLH 988
Score = 175 bits (425), Expect = 2e-43
Identities = 83/156 (53%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 432 YNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRN 491
Y+CGKL LD LL +L+ + RVLIF+QMTRMLD+LE + + Y Y RLDG T E R
Sbjct: 1419 YDCGKLQTLDNLLRRLKAGKHRVLIFTQMTRMLDVLEKFLNYHGYVYLRLDGSTRVEQRQ 1478
Query: 492 RQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQK 551
++ +N + S F F+LSTR+GGLG+NLT AD V+ YDSDWNP MD QA DR HRIGQ
Sbjct: 1479 ILMDRFNAD-SRIFCFILSTRSGGLGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 1537
Query: 552 KQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSG 587
+ V ++RLI++ TVEE I+++A K L + I+ G
Sbjct: 1538 RDVHIYRLISERTVEENILKKANQKRMLGDIAIEGG 1573
>SB_7325| Best HMM Match : SNF2_N (HMM E-Value=8.9e-32)
Length = 884
Score = 182 bits (443), Expect = 1e-45
Identities = 83/176 (47%), Positives = 119/176 (67%), Gaps = 2/176 (1%)
Query: 124 PHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFKNVPGP 183
P + G +++YQ+ GL WM+SL+ N +NGILADEMGLGKT+QTI+L Y+ K + GP
Sbjct: 698 PSMLVGGRLKEYQLAGLEWMVSLHNNNLNGILADEMGLGKTIQTIALFSYLIEKKRLNGP 757
Query: 184 HIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMII 243
+VIVP STL+NW EF+KW PS V G R + L G ++V +T+YE ++
Sbjct: 758 FLVIVPLSTLSNWQLEFEKWAPSAIVVSYKGSPNMRRS-AGAVLRTGKFNVVLTTYEYVM 816
Query: 244 REKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLR-EFKSMNRLLLTGTPLQNNLHE 298
R+K++ K W+YMV+DE HR+KN KL+++L + + +R+LLTGTPLQ L+E
Sbjct: 817 RDKAILAKVRWKYMVVDEGHRMKNHHCKLTQVLNTHYAAQHRILLTGTPLQVELNE 872
>SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42)
Length = 784
Score = 146 bits (353), Expect = 1e-34
Identities = 70/151 (46%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 434 CGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQ 493
CGK+ +LDKLL ++ + +VL+FS T +L+ILE+Y + R + RLDGQT R R
Sbjct: 438 CGKMKVLDKLLRMFEKDKCKVLLFSYSTELLNILENYVIGRGLVFSRLDGQTSPAQRMRV 497
Query: 494 IEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQ 553
+ E+N + F+ ++ST+AGGLG+N T A+VVII+D WNP DLQA DRA+RIGQ++
Sbjct: 498 VREFN-GNRDIFICLVSTKAGGLGLNFTGANVVIIFDPTWNPSNDLQAQDRAYRIGQRRD 556
Query: 554 VRVFRLITDNTVEEKIVERAEVKLRLDKLVI 584
V+V RLI+ T+EE + R K ++ + I
Sbjct: 557 VQVLRLISSGTIEEMMYLRQIYKQQMANIAI 587
Score = 97.1 bits (231), Expect = 6e-20
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 129 NGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLG------------YMKH 176
N +RDYQ G+ ++ Y + IL D+MGLGKT+Q I+LL + K+
Sbjct: 139 NCRLRDYQREGVQFLYQHYRSNNGAILGDDMGLGKTVQVIALLSAILGKTGTRADVFGKY 198
Query: 177 FKNVP-----------GPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRE 225
P G +++ P S L NW +E W + G + + +
Sbjct: 199 IGQGPSGKQSEVSTKKGVFLIVCPGSMLYNWKDELDTW-GYFRVKMYHGSSKE---MVMD 254
Query: 226 TLMPGNWDVCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRL 285
G DV +T+Y+ + + F NW +V+DE H++K+ +K ++ + K R
Sbjct: 255 QAAKGKLDVVLTTYDTLRINVTEFDCVNWLAVVMDEVHKLKDPSAKNTKAAKRLKVQRRF 314
Query: 286 LLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWF 321
LTGTPLQN ELW +L++ P S+ FD+++
Sbjct: 315 GLTGTPLQNRWSELWCVLDWANPGCLGSNLRFDAFY 350
>SB_46815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 144 bits (348), Expect = 4e-34
Identities = 69/95 (72%), Positives = 79/95 (83%), Gaps = 3/95 (3%)
Query: 686 WIEPPKRERKANYAVDAYFREALRVSEPKAPKVQAPRPPKQPIVQDFQFFPPRLFELLDQ 745
WIEPPKRERKANYAVD YFREALRVSEPKAP+ APRPPKQP VQD+QFFP RLFELLD+
Sbjct: 13 WIEPPKRERKANYAVDQYFREALRVSEPKAPR--APRPPKQPNVQDYQFFPTRLFELLDK 70
Query: 746 EIYHYRKTLGYKVPRNPELGPDAAKIQREEQRKID 780
EIY +RK++GYKVP + E P+ Q+E Q+ ID
Sbjct: 71 EIYAFRKSIGYKVPLDIE-DPEGPDKQKEAQKLID 104
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 140 bits (339), Expect = 5e-33
Identities = 82/209 (39%), Positives = 120/209 (57%), Gaps = 7/209 (3%)
Query: 430 LVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHED 489
++ + GKLT+LD LL KL+ Q RVLI+SQMTRM+DILE+Y +R++KY RLDG + D
Sbjct: 590 VISDSGKLTVLDGLLTKLKLQGHRVLIYSQMTRMIDILEEYMTFRKHKYMRLDGSSKISD 649
Query: 490 RNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIG 549
R + ++ + FVF+LSTRAGGLGINLT+AD VI YDSDWNP +D QA + G
Sbjct: 650 RRDMVADF-QNNKDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDEQA-----KKG 703
Query: 550 QKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGA 609
+K + +F + + + D G D + ++ DE+ + G+
Sbjct: 704 RKSKTSLFPPAPEGVPTASVPPSEASSVNGDASARLEGADADDISVMSLDEISMVSGDGS 763
Query: 610 NH-VFASKDSEVTDEDIDTILAKGESKTE 637
+ + A S T + D++L E K+E
Sbjct: 764 LYSMDAPPSSSATPFNEDSLLGDAEPKSE 792
Score = 139 bits (337), Expect = 9e-33
Identities = 74/204 (36%), Positives = 115/204 (56%), Gaps = 14/204 (6%)
Query: 236 ITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNN 295
ITSY++++++ F++ W+Y+V+DEA IK+ S ++L ++ NRLLLTGTP+QN+
Sbjct: 141 ITSYQLVVQDVRYFQRIKWQYIVLDEAQAIKSSSSVRWKILLGYQCRNRLLLTGTPIQNS 200
Query: 296 LHELWALLNFLLPDVFNSSDDFDSWFN-------TNAALGDNQLVSRLHAVLRPFLLRRX 348
+ ELWALL+F++P +F++ ++F+ WF+ N +L D +SRLH +L+PF+LRR
Sbjct: 201 MAELWALLHFIMPTLFDNHEEFNEWFSKDIESHAENKSLIDQNQLSRLHMILKPFMLRRI 260
Query: 349 XXXXXXXXXXXXXXXXXXGLSKMQREWYTKVLMK-DID------VVNGAGKVEKMRLQNI 401
GL+ Q+ Y V K ID + A L N+
Sbjct: 261 KKDVENELSEKIEIKLVCGLTTRQKWLYQAVKQKISIDDLVYTSASSSATSATTSSLMNL 320
Query: 402 LMQLRKCCNHPYLFDGAEPGPPYT 425
+MQ RK CNHP LF+ + P T
Sbjct: 321 VMQFRKVCNHPELFERRDVTSPVT 344
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/25 (72%), Positives = 23/25 (92%)
Query: 150 GINGILADEMGLGKTLQTISLLGYM 174
GI+GILADEMGLGKT+Q+I+ L Y+
Sbjct: 98 GISGILADEMGLGKTVQSIAFLSYL 122
>SB_21827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 133 bits (322), Expect = 6e-31
Identities = 87/250 (34%), Positives = 135/250 (54%), Gaps = 35/250 (14%)
Query: 111 NSKQKTIFRFEASPHYIK-NGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIS 169
N TI P + + +++ YQ+ GLNW+I ++E G+NGILADEMGLGKT+Q IS
Sbjct: 469 NDSHATISGLVTQPDILNPSRQLKPYQLTGLNWLILMHEQGVNGILADEMGLGKTVQAIS 528
Query: 170 LLGYMKHFKNVPGPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMP 229
+ ++ K GPH++IVP STL++ QE R T++RE ++
Sbjct: 529 FIAHLIE-KGDDGPHLIIVPSSTLSS--------------------QEER-TYLREEILD 566
Query: 230 GNWD--VCITSYEMI---IREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNR 284
+ D V IT+Y M + S ++ Y+V DE H +KN +S+ L ++ R
Sbjct: 567 EHSDFKVIITTYNMATGGFEDTSFLRQLRPHYVVFDEGHMLKNMQSQRYLKLTRIRAKRR 626
Query: 285 LLLTGTPLQNNLHELWALLNFLLPDVFNS-SDDFDSWFNTNAALGD------NQLVSRLH 337
LLLTGTP+QN+L EL +LL+F++P +F+ +D F D + +
Sbjct: 627 LLLTGTPMQNDLLELMSLLSFVMPTIFDGRTDGLKLLFGNKKLDRDADSGYIKERAEQAK 686
Query: 338 AVLRPFLLRR 347
+++PF+LRR
Sbjct: 687 KIMKPFVLRR 696
>SB_47493| Best HMM Match : Helicase_C (HMM E-Value=1.3e-16)
Length = 252
Score = 129 bits (311), Expect = 1e-29
Identities = 69/156 (44%), Positives = 100/156 (64%), Gaps = 13/156 (8%)
Query: 472 LWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDS 531
L+ Y Y RLDG E+R I+ +N E + F+F+LST+AGG G+NL SAD VI DS
Sbjct: 29 LFDGYAYERLDGSVRGEERYIAIKNFNEE-QDNFIFLLSTKAGGQGLNLMSADTVIFVDS 87
Query: 532 DWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVD 591
D+NPQ DLQA RAHRIGQ + V++ RL+ NTVEE I++ A+ K+RL VI+ G+L
Sbjct: 88 DYNPQNDLQAAARAHRIGQTRPVKIIRLVGRNTVEEIILKHADDKMRLTNNVIEGGQLA- 146
Query: 592 TKNQLNKDEMLNMIRHGANHVFASKDSEVTDEDIDT 627
N+++ G +F S++S+++D + D+
Sbjct: 147 -----------NILKFGLEKLFESEESDISDTEFDS 171
Score = 38.3 bits (85), Expect = 0.031
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 397 RLQNILMQLRKCCNHPYLFDG 417
+L +IL LRKC NHPYLFDG
Sbjct: 12 KLNSILPNLRKCVNHPYLFDG 32
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 122 bits (295), Expect = 1e-27
Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 48/368 (13%)
Query: 135 YQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHF---------KNVPGPHI 185
YQ G+ W+ L+ GI+ DEMGLGKT+QT+ L +K+ GP +
Sbjct: 439 YQQTGVKWLWELHCQQAGGIIGDEMGLGKTIQTVVFLAGLKYSGISARKSRRDQGLGPVL 498
Query: 186 VIVPKSTLTNWMNEFKKWCPSLKAVCL--IGDQETRNTFIRETLMPGNWDVCITSYEMII 243
++ P + L W+ EF KW P + L G R + + + V +TSY +
Sbjct: 499 IVCPVTVLHQWVKEFHKWWPEFRVAVLHDTGSFSGRRDALVRKICKAH-GVIVTSYSGVR 557
Query: 244 REKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALL 303
+ W Y+++DE H+I+N ++++ ++ ++ +R++L+G+P+QNNL ELW+L
Sbjct: 558 CNQDALLAQRWDYVILDEGHKIRNPDAEITLACKQIRTPHRIILSGSPMQNNLRELWSLF 617
Query: 304 NFLLPDVFNSSDDFDSWFN--------TNAALGDNQLVSRLHAVLR----PFLLRRXXXX 351
+F+ P + F + F+ NA+ Q + VLR P+LLRR
Sbjct: 618 DFVFPGKLGTLPVFLTEFSVPITTGGYANASKVQVQTAYKCACVLRDTINPYLLRRLKKD 677
Query: 352 XXXXXX--XXXXXXXXXGLSKMQREWYTKVL-MKDIDVVNGAGKVEKMRLQNILMQLRKC 408
LS QR+ Y + L +++ + AG K ++ L+ LRK
Sbjct: 678 VKMDLELPNKNEQVLFCRLSDEQRQLYEQYLDSREVQSIL-AG---KYKVFPGLIMLRKI 733
Query: 409 CNHPYLFDGAEPGPPYTTDEHLV-----------------YNCGKLTILDKLLPKLQEQE 451
CNHP L A DE GK+ +++ LL + Q
Sbjct: 734 CNHPDLTSEAGSLIKAKQDEEEAKRGVVKPRGPDDGYGDWRRAGKMVVVEALLKMWKTQG 793
Query: 452 SRVLIFSQ 459
RVL+FSQ
Sbjct: 794 HRVLVFSQ 801
Score = 101 bits (243), Expect = 2e-21
Identities = 47/81 (58%), Positives = 59/81 (72%)
Query: 505 FVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNT 564
FVF+L+TR GGLG+NLT AD VIIYD DWNP D QA +R+ RIGQ+KQV ++RL+T T
Sbjct: 809 FVFLLTTRVGGLGVNLTGADRVIIYDPDWNPSTDTQARERSWRIGQRKQVTIYRLLTTGT 868
Query: 565 VEEKIVERAEVKLRLDKLVIQ 585
+EEKI R K L V++
Sbjct: 869 IEEKIYHRQIFKQFLTNRVLE 889
>SB_56356| Best HMM Match : Helicase_C (HMM E-Value=1.3e-21)
Length = 149
Score = 122 bits (294), Expect = 1e-27
Identities = 63/123 (51%), Positives = 80/123 (65%), Gaps = 4/123 (3%)
Query: 451 ESRVLIFSQMTRMLDILEDYCL---WRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVF 507
+ RVL+F Q+ MLDI+E+ Y RLDG TP R+ + +N + S V
Sbjct: 27 QHRVLLFCQLKSMLDIVENDLFKTNMPSVTYLRLDGSTPAGSRHSIVHRFNNDPSID-VL 85
Query: 508 MLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEE 567
+L+T GGLG+NLT AD VI + DWNP DLQAMDRAHRIGQKK V V+RL+T T+EE
Sbjct: 86 LLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLVTKGTLEE 145
Query: 568 KIV 570
KI+
Sbjct: 146 KIM 148
>SB_46182| Best HMM Match : Helicase_C (HMM E-Value=7.5e-22)
Length = 227
Score = 115 bits (276), Expect = 2e-25
Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 400 NILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKLTILDKLLPKLQEQESRVLIFSQ 459
N L +LR+ NHP L GK T + + L + + +VLIFS
Sbjct: 40 NALSKLRQLANHPALIGET-------------MESGKFTDVSAYIETLLQAKQKVLIFSS 86
Query: 460 MTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGIN 519
T L I D+C Y L G T DR ++ + + + K +F +S +AGG G+N
Sbjct: 87 YTSHLKIYTDWCDKNNTPYSLLTGSTKIADRESEVANFQKDDN-KLLFFISLKAGGTGLN 145
Query: 520 LTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRL 579
LT A VI+ D WNP +LQA+ RAHRIGQ+ QV V R I +T+EEKI + + K +
Sbjct: 146 LTKASYVILLDPWWNPFAELQAIGRAHRIGQENQVNVVRFIAKDTIEEKISQLQQSKKEI 205
Query: 580 DKLVIQSGRLVDTKNQLN 597
+I++ + N ++
Sbjct: 206 SDAIIETSVPKEVLNNID 223
>SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24)
Length = 1058
Score = 110 bits (265), Expect = 5e-24
Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 14/202 (6%)
Query: 435 GKLTILDKLLPKLQE-QESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQ 493
GK+ +LD +L + + +V++ S T+ LD+ E C R+Y++ RLDG + R +
Sbjct: 416 GKMQVLDYILAVTKATSDDKVVLVSNYTQTLDLFEKLCRQRRYQHVRLDGSMSIKKRQKI 475
Query: 494 IEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQ 553
++ +N F+FMLS++AGG G+NL A+ ++++D DWNP D QAM R R GQKK+
Sbjct: 476 VDRFNDPKGGDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKK 535
Query: 554 VRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVF 613
V+ ++ EEKI +R K L V VD + + K + +R +F
Sbjct: 536 ASVY---LSSSFEEKIFQRQAHKKALSSCV------VDEEENVEKHFSVEQLR----DLF 582
Query: 614 ASKDSEVTDEDIDTILAKGESK 635
+ ++D + L GES+
Sbjct: 583 RLNEETLSDTHDNDALTNGESE 604
>SB_22405| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 764
Score = 107 bits (258), Expect = 3e-23
Identities = 53/129 (41%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 414 LFDGAEPGPPYTTD--EHLVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYC 471
L+DG P D E + GKLT+L+ +L ++ RV++ S ++ LDIL+ C
Sbjct: 539 LYDGLLKLFPECNDASELSIAQSGKLTVLNSMLEEIHCTGERVVLVSNYSQTLDILQKLC 598
Query: 472 LWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDS 531
++Y+Y RLDG TP R +E +N + + FVF+LS++AGG+G+NL A +I+YD
Sbjct: 599 TVKKYRYLRLDGSTPTAKRQSLVERFNAKHCQDFVFLLSSKAGGVGLNLIGASRLILYDI 658
Query: 532 DWNPQMDLQ 540
DWNP DLQ
Sbjct: 659 DWNPANDLQ 667
Score = 54.0 bits (124), Expect = 6e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 185 IVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIR 244
++I P S + NW EF+KW + + + R ++E ++ + V I SYEM IR
Sbjct: 298 LIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMR---VKEFIISPIYPVLIISYEMFIR 354
Query: 245 EKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREF 279
+ + + DEAHR+KN K + + + F
Sbjct: 355 SQDDIMNIKFDLFICDEAHRLKNSAIKTTTVAKAF 389
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 94.7 bits (225), Expect = 3e-19
Identities = 56/164 (34%), Positives = 96/164 (58%), Gaps = 15/164 (9%)
Query: 428 EHLVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILE----------DYCLW-RQY 476
E+ V GKL +L ++L + E +VL+FSQ LD++E D W +
Sbjct: 1170 EYNVELSGKLVLLLEILADAEAVEEKVLVFSQSLVSLDLIERALGGGEVGGDRENWCKGC 1229
Query: 477 KYCRLDGQTPHEDRNRQIEEYN-MEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNP 535
Y R+DG T + R R + +N + +F++ST+AGGLGINL +A+ VI++D+ WNP
Sbjct: 1230 DYFRMDGSTSVQLRQRWADIFNDPDNKTARLFLISTKAGGLGINLVAANRVIVFDASWNP 1289
Query: 536 QMDLQAMDRAHRIGQKKQVRVFRLITD---NTVEEKIVERAEVK 576
D+Q++ R +R GQ K V V+R ++ ++ E++V++ +++
Sbjct: 1290 SHDVQSIFRVYRFGQTKAVYVYRFLSQVAKLSISERVVDKHQIE 1333
Score = 79.8 bits (188), Expect = 1e-14
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 32/214 (14%)
Query: 121 EASPHYIKNGEMRDYQVRGLNWM-------ISLYENGING---ILADEMGLGKTLQTISL 170
E + H +K ++ +Q +G+ +M + Y+ G G ILA MGLGKTLQ ++L
Sbjct: 782 EVNKHIVKY--LKPHQCKGVQFMYDCLVESVKAYKKGEPGSGCILAHCMGLGKTLQVVTL 839
Query: 171 LGYMKHFKNVP-GPHIVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMP 229
+ + + K + +V+ P +TL NW EF+KW + + QE + R M
Sbjct: 840 VHTLFNNKELEFTTALVVAPLNTLLNWQVEFEKWLSVDDRMEVYVLQEVGHNSWRRADML 899
Query: 230 GNWD----VCITSYEMI--------IREKSVFKKFNWRYM-------VIDEAHRIKNEKS 270
W + I Y+M +R K V K F + + DE H +KN+ S
Sbjct: 900 TQWQRYGGIMIMGYDMYRNLSLCNNVRSKKVKKIFKETLVDPGPDIVICDEGHILKNDAS 959
Query: 271 KLSELLREFKSMNRLLLTGTPLQNNLHELWALLN 304
+S L K+ R++LTGTPLQNNL E L +
Sbjct: 960 AISRALNAIKTRRRVVLTGTPLQNNLIECVGLFS 993
>SB_21828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 81.4 bits (192), Expect = 3e-15
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 424 YTTDEHLVYNCGKLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDG 483
Y E L+Y+ GK L+ +LP++++ RVL+FSQ T ++DI+E Y Y+Y RLDG
Sbjct: 137 YVLGEELLYDSGKFERLNAMLPEMKDNGDRVLLFSQFTLVMDIIEVYLQHCGYRYFRLDG 196
Query: 484 QTPHEDRNRQIEEYNMEGSEKFVFMLSTRAG 514
QTP +R I+ +N + + F+F+LST+AG
Sbjct: 197 QTPVVERQPMIDNFNSD-PDIFLFLLSTKAG 226
>SB_24486| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 785
Score = 70.5 bits (165), Expect = 6e-12
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Query: 493 QIEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKK 552
+I E +++ EK + RAG LG+NL A V+++DS WNP D+QA+ R +R GQ +
Sbjct: 642 EIIEESLKLGEKILIF---RAGCLGVNLVGASRVVVFDSSWNPCHDVQAVCRVYRYGQVR 698
Query: 553 QVRVFRLITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHV 612
++RLI T+E+KI +R K + V+ ++ + K E++++I +
Sbjct: 699 PCHIYRLIATGTMEKKIYDRQVSKQGVANRVVDE---LNPEANFTKQEIMSLICE-EEPL 754
Query: 613 FASKDSEVTDEDI-DTILAK 631
S+D V D D IL +
Sbjct: 755 VPSQDVSVAAADFQDPILKR 774
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 257 MVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDD 316
++ DE HRIKN ++ +S L++ K+ R++LTG PLQNNL E W +++F+ P+ + +
Sbjct: 462 VICDEGHRIKNNQANISHALKKIKTRRRVVLTGYPLQNNLVEYWCMVDFVRPNFLGNRHE 521
Query: 317 FDSWF 321
F + F
Sbjct: 522 FSNMF 526
Score = 46.8 bits (106), Expect = 9e-05
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 150 GINGILADEMGLGKTLQTISLLG-YMKHFKNVPGPHIVIVPKSTLTNWMNEFKKWCP 205
G ILA MGLGKTLQ ++ + +++H + IVP +T+ NW++EF W P
Sbjct: 286 GFGCILAHCMGLGKTLQVVAFVDIFLRH--TTAKKVLCIVPINTIQNWLSEFNSWLP 340
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 65.7 bits (153), Expect = 2e-10
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 469 DYCLWRQ---YKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLSTRAGGLGINLTSA 523
DYC +R + YCR+DG T +R I+ +N S++F+F+LSTRAGGLGINL +A
Sbjct: 120 DYCAYRHEDGFYYCRIDGSTGGPERQEMIDAFNKPNSDRFLFLLSTRAGGLGINLQTA 177
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 64.9 bits (151), Expect = 3e-10
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 447 LQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFV 506
L +++ ++F + ++D + + R KY R+ G P R + + + + + +
Sbjct: 336 LDGADNKFIVFCRHKLVMDAVVETIAKRGVKYIRIAGDVPSSVRGGMVHRFQEDPTCR-I 394
Query: 507 FMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVE 566
+L+ A G+ LT+AD V+ + + P + LQA DRAHRIGQ V + L+ T++
Sbjct: 395 AVLAIEAASFGLTLTAADQVVFAELHFTPGVLLQAEDRAHRIGQTNAVNIHYLVGRGTLD 454
Query: 567 EKIVERAEVK 576
E + + + K
Sbjct: 455 EVLWTKIQRK 464
>SB_3329| Best HMM Match : SNF2_N (HMM E-Value=1.5e-07)
Length = 200
Score = 63.3 bits (147), Expect = 1e-09
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 223 IRETLMPGNWDVCITSYEMIIRE----KSVFKKFNWRYMVIDEAHRIKNEKSKLSELLRE 278
I+E D+ +T+Y I + S K W +V+DE H I+N+ + ++ + +
Sbjct: 24 IKEVKYLKKQDIILTTYPTIGSDFRMNDSPLHKIKWLRIVLDEGHAIRNKNTVWTKAVLK 83
Query: 279 FKSMNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSRLHA 338
++ R ++TGTP+QN + +LW+++ FL D F+ + G+ RL A
Sbjct: 84 LEAERRWVVTGTPIQNRIGDLWSIVRFLRLDPFSDPTWWKISIANGVTRGNEDAQERLQA 143
Query: 339 VLRPFLLRR 347
+++ +RR
Sbjct: 144 LIKHISIRR 152
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 59.3 bits (137), Expect = 2e-08
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 436 KLTILDKLLPKLQEQESRV--LIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQ 493
K+ L K L L+ Q+ + L+ SQ T LDILE + Y RLDG E R +
Sbjct: 144 KIDALLKALDTLRGQDPSIKSLVVSQFTSFLDILEYFLERDGIDYLRLDGTMGQEARVKV 203
Query: 494 IEEYNMEGSEKFVFMLSTRAGGLGINLTSADVVIIYD 530
I+ + S K VF+LS AGG+G+NLT+A V + D
Sbjct: 204 IDRFRDPDSPK-VFLLSLTAGGVGLNLTAATRVFLMD 239
Score = 44.4 bits (100), Expect = 5e-04
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 533 WNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRL 579
WNP + Q DR HR+GQ ++V + + I +++VEE+++ E K L
Sbjct: 286 WNPATEEQCFDRCHRLGQTEEVIITKYIVNDSVEERMLSLQEEKREL 332
>SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003)
Length = 1063
Score = 58.8 bits (136), Expect = 2e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 526 VIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDK 581
+ + D WNP D QA+DRA+RIGQKK V ++RLIT ++EEKI + K L K
Sbjct: 129 ISVVDPSWNPATDAQAVDRAYRIGQKKCVVIYRLITCGSIEEKIYRKQIFKDALMK 184
>SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095)
Length = 142
Score = 57.6 bits (133), Expect = 5e-08
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 256 YMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNF 305
Y+++DE H+IKN +K S+ +R + + +LTGTP+QNNL E+WAL +F
Sbjct: 2 YIILDEGHKIKNV-TKTSKNVRAIPAKHHFILTGTPIQNNLREMWALFDF 50
>SB_35887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 506 VFMLSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTV 565
V +L ++G G+N+ A V++ + NP +LQA+ R HRIGQ K V+R I TV
Sbjct: 468 VLLLPLQSGSNGLNIIEATHVLLVEPALNPAHELQALGRVHRIGQTKPTHVYRFIIQGTV 527
Query: 566 EEKI 569
E ++
Sbjct: 528 ESRM 531
>SB_44470| Best HMM Match : SNF2_N (HMM E-Value=1.2e-17)
Length = 549
Score = 52.0 bits (119), Expect = 2e-06
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 27/141 (19%)
Query: 181 PGPHIVIVPKSTLTNWMNEFKKWCPS--LKAVCLIGDQETRNTFIRETLMPGNWDVCITS 238
P P +VI P + +W+ E +K+ LK + G R +R + N ++ + S
Sbjct: 369 PLPSLVICPPTLTGHWVYEVEKFVIKEYLKPLHYTGPPMERQR-LRNKVK--NHNLIVAS 425
Query: 239 YEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLHE 298
Y+++ + FK +W Y ++DE H IKN K+K NN+ E
Sbjct: 426 YDIVRNDGDFFKSIHWNYCILDEGHIIKNGKTK----------------------NNVLE 463
Query: 299 LWALLNFLLPDVFNSSDDFDS 319
LW+L +FL+P + F +
Sbjct: 464 LWSLFDFLMPGFLGTEKQFQA 484
>SB_54314| Best HMM Match : DEAD (HMM E-Value=0.48)
Length = 137
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 185 IVIVPKSTLTNWMNEFKKWCPSLKAVCLIGDQETRNTFIRETLMPGNWDVCITSYEMIIR 244
++I P S + NW EF+KW + + + R ++E ++ + V I SYEM IR
Sbjct: 49 LIITPGSLVKNWCAEFRKWLGNERMRVFPVTSDMR---VKEFIISPIYPVLIISYEMFIR 105
Query: 245 EKSVFKKFNWRYMVIDEAHRIKNEKSK 271
+ + + DEAHR+KN K
Sbjct: 106 SQDDIMNIKFDLFICDEAHRLKNSAIK 132
>SB_33711| Best HMM Match : PSCyt1 (HMM E-Value=9)
Length = 103
Score = 40.3 bits (90), Expect = 0.008
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 132 MRDYQVRGLNWMISLYENGINGILADEMGLGKTLQ 166
+R YQ+ G+ WM G IL DEMGLGKT+Q
Sbjct: 69 LRPYQLEGVGWMRDCALTGHGCILGDEMGLGKTIQ 103
>SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 808
Score = 37.9 bits (84), Expect = 0.041
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 121 EASPHYIKNGEMRDYQVRGLNWMISLYENGING-ILADEMGLGKTLQTISLLGYMKHFKN 179
+ +P + K R + +G +Y GI G ILAD+MGLGKTL ISL+ H
Sbjct: 674 DLAPFWEKTSS-RCWYNKGTKLSTDVYPYGIKGGILADDMGLGKTLTVISLI-VTNHLDG 731
Query: 180 VP 181
+P
Sbjct: 732 MP 733
>SB_58947| Best HMM Match : Helicase_C (HMM E-Value=0.058)
Length = 168
Score = 37.1 bits (82), Expect = 0.072
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 448 QEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVF 507
Q+ + L+ SQ T LDILE + Y RLDG E R + I+ + S K VF
Sbjct: 38 QDPSIKSLVVSQFTSFLDILEYFLERDGIDYLRLDGTMGQEARVKVIDRFRDPDSPK-VF 96
Query: 508 MLS 510
+LS
Sbjct: 97 LLS 99
>SB_4355| Best HMM Match : DUF1421 (HMM E-Value=6.6)
Length = 642
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 545 AHRIGQKKQVRVFRLITDNTVEEKIVERAEVKLRLDK 581
A+RIGQKK V ++RLIT ++EEKI + K L K
Sbjct: 2 AYRIGQKKCVVIYRLITCGSIEEKIYRKQIFKDALMK 38
>SB_39816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 34.7 bits (76), Expect = 0.39
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 269 KSKLSELLREFKSMNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNAALG 328
++ ELLRE K N + L L ++ ++W L +F D+++S S+FN AL
Sbjct: 56 RTNTHELLRELKHPNVISLQCVFLSHSDRKVWLLFDFAEHDLWHS----HSYFNYACALS 111
Query: 329 DNQLVSRLHAV 339
+ L RL+ V
Sbjct: 112 GDSLQRRLYIV 122
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 34.7 bits (76), Expect = 0.39
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 452 SRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNMEGSEKFVFMLST 511
++ +IF R +D L + + + G P ++R ++++ S ++ST
Sbjct: 237 TQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSR---VLIST 293
Query: 512 RAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIGQK 551
G+++ +VI YD N ++ + + R+ R G+K
Sbjct: 294 DVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRK 333
>SB_30728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 33.5 bits (73), Expect = 0.89
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 437 LTILDKLLPKLQEQESRVLIFSQMTRMLDILE 468
+ L +LL L+EQ R LIFSQ +MLDI++
Sbjct: 1 MVFLVELLDNLREQGHRCLIFSQSRKMLDIIQ 32
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 806 KRDFNQFIKANEKYGRDDIENIAKDVEGKTPEEVMEYSAVFWERCHELQDIDRIMGQIER 865
K D N+F++ N K D N +KD+ EV + + ++++ IE
Sbjct: 494 KDDSNEFVERNPKIEIQDKSNESKDLTSNLLNEVKTCKEMLESQRSHIRELQMDKRDIEE 553
Query: 866 GEAKIQRRASIKKA 879
G AK++R I ++
Sbjct: 554 GYAKMRRELLILRS 567
>SB_51562| Best HMM Match : HARP (HMM E-Value=0.00049)
Length = 508
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 154 ILADEMGLGKTLQTISLLGYMKHFKNVPGPHIVIVPKSTLTNW 196
I+AD+MGLGKT+Q I + + + P +V+ P S W
Sbjct: 426 IIADDMGLGKTVQAICVASFYRK----EWPLLVVAPSSMRLTW 464
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 806 KRDFNQFIKANEKYGRDDIENIAKDVEGKTPEEVMEYSAVFWERCHELQDIDRIMGQIER 865
K D N+F++ N K D N +KD+ EV + + ++++ IE
Sbjct: 472 KDDSNEFVERNPKIEIQDKSNESKDLTSNLLNEVKTCKEMLESQRSHIRELQMDKRDIEE 531
Query: 866 GEAKIQRRASIKKA 879
G AK++R I ++
Sbjct: 532 GYAKMRRELLILRS 545
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 854 QDIDRIMGQIERGEAKIQRRASIKKALDAKMARYRAPFHQLRISYGTNKGKNYVEEEDRF 913
+ I+ + ++ R E +Q + K L+ +++ H+++IS N K++ EE DR
Sbjct: 328 EQIESLKSELNRSETALQVQKRQYKTLEDVISK-----HEIKISQLENNAKSFQEERDRI 382
Query: 914 LVCMLHKLGFDKENVYEELR 933
M+ G K+N ++L+
Sbjct: 383 ERDMILMQGKLKDNESDQLK 402
>SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11)
Length = 1461
Score = 31.9 bits (69), Expect = 2.7
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 567 EKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVFASKDSEVTDEDID 626
EK+ + E KL+ + + V TK++ + N I +G N V S++ ++ +
Sbjct: 2 EKLTKELEAKLKTLRFRVLKTNDVLTKDKQALERHYNSITNGINAV-----SDIKEQLEE 56
Query: 627 TILAKGESKTEELKQKLESLGESSLRAFSMDTPGATTDSVYQFEGEDYR--EKQKVI 681
AKGES+ EE+ Q ES+ + A S + Q E ED R EK K I
Sbjct: 57 KKFAKGESE-EEIGQWGESVEKELEDADSANAKLQAAIQYAQKEEEDKRWLEKAKTI 112
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 31.9 bits (69), Expect = 2.7
Identities = 27/130 (20%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 531 SDWNPQMDLQAMDRAHRIGQKKQVRVFRLITDNTVEEKIV---ERAEVKLRLDKLVIQSG 587
SDW Q++ Q M++ + K++ I + +E+ + RAE++ +++ + Q
Sbjct: 86 SDWLEQVERQ-MEQEREVFAKEKAEFQDQIENQIEKEREILAKARAEIQEQMEGQIGQER 144
Query: 588 RLVDTKNQLNKDEMLNMIRHGANHVFASKDSEVTDEDIDTILAKGESKTEELKQKLESLG 647
++ + + + M + + KDS + + + ++ ES TE + +ESL
Sbjct: 145 DILAKEKEEFMERMYEELESERQIIGQEKDSLLENSRLLAVMVDSESVTELRMRDIESLE 204
Query: 648 ESSLRAFSMD 657
E S D
Sbjct: 205 EEKQIHMSCD 214
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 31.9 bits (69), Expect = 2.7
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 436 KLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIE 495
K+ L+ L KLQ +S +IF + +++L L + + + RNR
Sbjct: 278 KVHCLNTLFQKLQINQS--IIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFH 335
Query: 496 EYNMEGSEKFVFM-LSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIG 549
++ V L TR GI++ S +VVI +D N + L + R+ R G
Sbjct: 336 DFRQGHCRNLVCSDLFTR----GIDIQSVNVVINFDFPKNSETYLHRIGRSGRFG 386
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 31.9 bits (69), Expect = 2.7
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 436 KLTILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIE 495
K+ L+ L KLQ +S +IF + +++L L + + + RNR
Sbjct: 278 KVHCLNTLFQKLQINQS--IIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFH 335
Query: 496 EYNMEGSEKFVFM-LSTRAGGLGINLTSADVVIIYDSDWNPQMDLQAMDRAHRIG 549
++ V L TR GI++ S +VVI +D N + L + R+ R G
Sbjct: 336 DFRQGHCRNLVCSDLFTR----GIDIQSVNVVINFDFPKNSETYLHRIGRSGRFG 386
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 31.1 bits (67), Expect = 4.8
Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 523 ADVVIIYDSDWNPQMDLQAMDRAHRIGQKK-QVRVFRLI--TDNTVEEKIVERAEVKLRL 579
A+VV++ D D + + + + + + Q + +LI +DNT + ++E AE
Sbjct: 187 AEVVVLKDQDMHVNLYFTSEEGENSVAQSLVDLGHGQLIGGSDNTSKPVVLEDAEQ---- 242
Query: 580 DKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVFASKDSEVTDEDIDTILAKGESKTEEL 639
++ VI+ G KN + ++ ++ A A+KD + + ++ ++ + ++ E
Sbjct: 243 NQEVIEGGEKTIEKNT-EQSVVVEAVQEKAVTSDANKDKQEEESNVQSLSEEQTAQPEGE 301
Query: 640 KQKLESLGESSLRA 653
K E +GES +A
Sbjct: 302 KVAKEEIGESEEKA 315
>SB_52725| Best HMM Match : WD40 (HMM E-Value=2.1e-22)
Length = 874
Score = 30.7 bits (66), Expect = 6.3
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 559 LITDNTVEEKIVERAEVKLRLDKLVIQSGRLVDTKNQLNKDEMLNMIRHGANHVFASK-D 617
LIT + +EEK AE+K R+++L +++ + K+ +++ + + + K
Sbjct: 450 LITKSDLEEKNAMMAELKTRVEELKMENEYQLRLKDMNYNEKIKELTEKFIQEMESLKTK 509
Query: 618 SEVTDEDIDTILAKGESKTEELKQKLESLG 647
++V D D AK E EE+ KL SLG
Sbjct: 510 NQVLKTDKDKEEAKHE---EEVSYKLGSLG 536
>SB_43947| Best HMM Match : efhand (HMM E-Value=2e-11)
Length = 482
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 820 GRDDIENIAKDVEGKTPEEVMEYSAVFWERCHELQDIDRIMGQIERGEAK 869
G DD +N+ D+E KT V E E +L D D+ + E GEAK
Sbjct: 264 GSDDSKNLQSDLE-KTKLSVQELEKQRLEAQSKLDDFDKEQQEEELGEAK 312
>SB_24838| Best HMM Match : NCD1 (HMM E-Value=2.3e-32)
Length = 539
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 624 DIDTILAKGESKTEELKQKLE---SLGESSLRAFSMDTPGATTDSVYQFEGEDYREKQK 679
DID++LA + + EEL +K++ SLG+ S + YQ E ++ R+KQ+
Sbjct: 316 DIDSLLAANKEQQEELARKIDEARSLGQEVNELESELVKLQSAQVSYQLEQKELRKKQR 374
>SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18)
Length = 1086
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 804 WTKRDFNQFIKANEKYGRDDIENIAKDVEGKTPEEVMEYSAVFWERCHELQ 854
W++ D +F+K ++G++ + + + K+ E++EY + W++ H Q
Sbjct: 360 WSEDDIKKFVKGLRQFGKNFYKIHKEHLPYKSTSELVEYYYI-WKKSHSAQ 409
>SB_1402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 615 SKDSEVTDEDIDTILAKGESKTEELKQKLESLG-ESSLRAFSMDTPGATTDSVYQF 669
S++SE+ D+DT L GES+ + K ++ L ES L+ +DT + +S Q+
Sbjct: 109 SEESELQYCDVDTKLLSGESELQYCKVDIKLLSEESELQYCDVDTKLLSEESELQY 164
>SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 30.7 bits (66), Expect = 6.3
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 444 LPKLQEQESRVLIFSQMTRMLDILEDYCLWRQYKYCRLDGQTP-HEDRNRQIEEYNMEGS 502
L + + + R+L+ S+ R E+ ++ K L +T HE+ +++E+Y MEG
Sbjct: 42 LAEAESMQRRILLLSEELRKT---EERLEEQEDKLADLKDRTDTHEEVRKELEDYEMEGD 98
Query: 503 EKFV 506
EK +
Sbjct: 99 EKLL 102
>SB_57245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 30.7 bits (66), Expect = 6.3
Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 15/135 (11%)
Query: 605 IRHGANHVFASKDSEVTDEDIDTILAKGESKTEELKQKLESLGESSLRAFSMDTPGATTD 664
+R+ +HV D DED DT AK + + +L S L A S T
Sbjct: 95 VRYIDDHVRYIDDRSSDDED-DT--AK-----DNHRPRLHSNSRKHLNATSATPSSTPTR 146
Query: 665 SVYQFEGE-DYREKQKVIPMGSWIEPPKRERK------ANYAVDAYFREALRVSEPKAPK 717
+ EGE D ++V + P+RER N + FR+ R+S +
Sbjct: 147 TAEYLEGEGDGDIDREVEEQDPLLTGPRRERNISECTSGNESDMVNFRKTTRLSSEQLVC 206
Query: 718 VQAPRPPKQPIVQDF 732
P P KQP+ DF
Sbjct: 207 DSKPAPRKQPLSADF 221
>SB_51310| Best HMM Match : NCD1 (HMM E-Value=2.3e-32)
Length = 423
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 624 DIDTILAKGESKTEELKQKLE---SLGESSLRAFSMDTPGATTDSVYQFEGEDYREKQK 679
DID++LA + + EEL +K++ SLG+ S + YQ E ++ R+KQ+
Sbjct: 316 DIDSLLAANKEQQEELARKIDEARSLGQEVNELESELVKLQSAQVSYQLEQKELRKKQR 374
>SB_46095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.7 bits (66), Expect = 6.3
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 615 SKDSEVTDEDIDTILAKGESKTEELKQKLESLG-ESSLRAFSMDTPGATTDSVYQF 669
S++SE+ D+DT L GES+ + K ++ L ES L+ +DT + +S Q+
Sbjct: 109 SEESELQYCDVDTKLLSGESELQYCKVDIKLLSEESELQYCDVDTKLLSEESELQY 164
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 30.3 bits (65), Expect = 8.3
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 589 LVDTKNQLNKDEMLNMIRHGANHVFASKDSEV--TDEDI---DTILAKGESKT-EELKQK 642
++ + L+KD + NMI+ + A K +V E+I +LA +++T E ++Q
Sbjct: 308 VIQSSGGLSKDAIENMIKEAEKYAEADKQKKVEKLKEEIAKVREVLANKDNETGETIRQA 367
Query: 643 LESLGESSLRAFSM 656
L + SL+ F M
Sbjct: 368 YSELQQKSLKLFEM 381
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Query: 232 WDVCITSYEMIIREKSVFKKFNWRYM 257
WDV T +I+RE+ VFK++ W Y+
Sbjct: 142 WDV--TGDSVILRERLVFKQYGWEYV 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,790,219
Number of Sequences: 59808
Number of extensions: 1238446
Number of successful extensions: 3163
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3024
Number of HSP's gapped (non-prelim): 115
length of query: 1026
length of database: 16,821,457
effective HSP length: 89
effective length of query: 937
effective length of database: 11,498,545
effective search space: 10774136665
effective search space used: 10774136665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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