Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000929-TA|BGIBMGA000929-PA|undefined
(124 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15760-1|CAA33767.1| 187|Drosophila melanogaster protein ( Dros... 30 1.0
M21159-1|AAA28927.1| 557|Drosophila melanogaster protein ( D.me... 28 4.1
AY118416-1|AAM48445.1| 557|Drosophila melanogaster RE70560p pro... 28 4.1
AE014297-3168|AAN13906.1| 557|Drosophila melanogaster CG5374-PB... 28 4.1
AE014297-3167|AAF56009.1| 557|Drosophila melanogaster CG5374-PA... 28 4.1
X63503-1|CAA45074.1| 1002|Drosophila melanogaster yemanuclein-al... 27 5.4
BT015223-1|AAT94452.1| 842|Drosophila melanogaster RE33235p pro... 27 5.4
AE014297-4321|AAF56858.2| 1002|Drosophila melanogaster CG14513-P... 27 5.4
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 27 7.2
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 27 7.2
AY060618-1|AAL28166.1| 665|Drosophila melanogaster GH04232p pro... 27 9.5
AE014134-235|AAF51389.1| 665|Drosophila melanogaster CG5397-PA ... 27 9.5
>X15760-1|CAA33767.1| 187|Drosophila melanogaster protein (
Drosophila melanogastermRNA of pig-1 gene. ).
Length = 187
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 16 SNNGNSRREPTKLDFLGTDMPDGIL 40
SNN N RR PT GT +P G++
Sbjct: 148 SNNNNKRRHPTTTTGAGTTIPGGVV 172
>M21159-1|AAA28927.1| 557|Drosophila melanogaster protein (
D.melanogaster T complexprotein 1 (Tcp-1) mRNA, complete
cds. ).
Length = 557
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62
K+A + + Y N+ ++ E + L + G D+ +G++ D + S++
Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514
Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91
+L+ TEA + I+ I LN +D S
Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545
>AY118416-1|AAM48445.1| 557|Drosophila melanogaster RE70560p
protein.
Length = 557
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62
K+A + + Y N+ ++ E + L + G D+ +G++ D + S++
Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514
Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91
+L+ TEA + I+ I LN +D S
Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545
>AE014297-3168|AAN13906.1| 557|Drosophila melanogaster CG5374-PB,
isoform B protein.
Length = 557
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62
K+A + + Y N+ ++ E + L + G D+ +G++ D + S++
Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514
Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91
+L+ TEA + I+ I LN +D S
Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545
>AE014297-3167|AAF56009.1| 557|Drosophila melanogaster CG5374-PA,
isoform A protein.
Length = 557
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62
K+A + + Y N+ ++ E + L + G D+ +G++ D + S++
Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514
Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91
+L+ TEA + I+ I LN +D S
Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545
>X63503-1|CAA45074.1| 1002|Drosophila melanogaster yemanuclein-alpha
protein.
Length = 1002
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 66 RKKTEAL--VKSINGNINLN-FDDTGSDSTSIDKNFHARYGNN 105
+KKT+ L V + NG+ + + F D D I K A+YGN+
Sbjct: 80 KKKTKKLKQVSTTNGSASTDPFADNDDDVARIVKELEAKYGNS 122
>BT015223-1|AAT94452.1| 842|Drosophila melanogaster RE33235p
protein.
Length = 842
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 66 RKKTEAL--VKSINGNINLN-FDDTGSDSTSIDKNFHARYGNN 105
+KKT+ L V + NG+ + + F D D I K A+YGN+
Sbjct: 80 KKKTKKLKQVSTTNGSASTDPFADNDDDVARIVKELEAKYGNS 122
>AE014297-4321|AAF56858.2| 1002|Drosophila melanogaster CG14513-PA
protein.
Length = 1002
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 66 RKKTEAL--VKSINGNINLN-FDDTGSDSTSIDKNFHARYGNN 105
+KKT+ L V + NG+ + + F D D I K A+YGN+
Sbjct: 80 KKKTKKLKQVSTTNGSASTDPFADNDDDVARIVKELEAKYGNS 122
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 27.1 bits (57), Expect = 7.2
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 18 NGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSRSNLRKKTEALVKSIN 77
N N+ P L F GT+ PDG G I I NR++ ++ L+ + AL + N
Sbjct: 42 NKNNFHIPGYL-FYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-N 99
Query: 78 GNINL 82
G+ L
Sbjct: 100 GSTTL 104
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 27.1 bits (57), Expect = 7.2
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 18 NGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSRSNLRKKTEALVKSIN 77
N N+ P L F GT+ PDG G I I NR++ ++ L+ + AL + N
Sbjct: 42 NKNNFHIPGYL-FYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-N 99
Query: 78 GNINL 82
G+ L
Sbjct: 100 GSTTL 104
>AY060618-1|AAL28166.1| 665|Drosophila melanogaster GH04232p
protein.
Length = 665
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Query: 43 GNDIPITNRLQSELALTLSRSNLRKKTE-----ALVKSINGNI 80
GN++ I N L+S+ A + +++ + +TE ALVK + GN+
Sbjct: 290 GNELEIVNCLRSKSAEDIIKNDDKVQTERLAGRALVKGLTGNV 332
>AE014134-235|AAF51389.1| 665|Drosophila melanogaster CG5397-PA
protein.
Length = 665
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Query: 43 GNDIPITNRLQSELALTLSRSNLRKKTE-----ALVKSINGNI 80
GN++ I N L+S+ A + +++ + +TE ALVK + GN+
Sbjct: 290 GNELEIVNCLRSKSAEDIIKNDDKVQTERLAGRALVKGLTGNV 332
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.309 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,670,889
Number of Sequences: 52641
Number of extensions: 211551
Number of successful extensions: 385
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 384
Number of HSP's gapped (non-prelim): 12
length of query: 124
length of database: 24,830,863
effective HSP length: 76
effective length of query: 48
effective length of database: 20,830,147
effective search space: 999847056
effective search space used: 999847056
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 56 (26.6 bits)
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