BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000929-TA|BGIBMGA000929-PA|undefined (124 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X15760-1|CAA33767.1| 187|Drosophila melanogaster protein ( Dros... 30 1.0 M21159-1|AAA28927.1| 557|Drosophila melanogaster protein ( D.me... 28 4.1 AY118416-1|AAM48445.1| 557|Drosophila melanogaster RE70560p pro... 28 4.1 AE014297-3168|AAN13906.1| 557|Drosophila melanogaster CG5374-PB... 28 4.1 AE014297-3167|AAF56009.1| 557|Drosophila melanogaster CG5374-PA... 28 4.1 X63503-1|CAA45074.1| 1002|Drosophila melanogaster yemanuclein-al... 27 5.4 BT015223-1|AAT94452.1| 842|Drosophila melanogaster RE33235p pro... 27 5.4 AE014297-4321|AAF56858.2| 1002|Drosophila melanogaster CG14513-P... 27 5.4 X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 27 7.2 AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 27 7.2 AY060618-1|AAL28166.1| 665|Drosophila melanogaster GH04232p pro... 27 9.5 AE014134-235|AAF51389.1| 665|Drosophila melanogaster CG5397-PA ... 27 9.5 >X15760-1|CAA33767.1| 187|Drosophila melanogaster protein ( Drosophila melanogastermRNA of pig-1 gene. ). Length = 187 Score = 29.9 bits (64), Expect = 1.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 16 SNNGNSRREPTKLDFLGTDMPDGIL 40 SNN N RR PT GT +P G++ Sbjct: 148 SNNNNKRRHPTTTTGAGTTIPGGVV 172 >M21159-1|AAA28927.1| 557|Drosophila melanogaster protein ( D.melanogaster T complexprotein 1 (Tcp-1) mRNA, complete cds. ). Length = 557 Score = 27.9 bits (59), Expect = 4.1 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62 K+A + + Y N+ ++ E + L + G D+ +G++ D + S++ Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514 Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91 +L+ TEA + I+ I LN +D S Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545 >AY118416-1|AAM48445.1| 557|Drosophila melanogaster RE70560p protein. Length = 557 Score = 27.9 bits (59), Expect = 4.1 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62 K+A + + Y N+ ++ E + L + G D+ +G++ D + S++ Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514 Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91 +L+ TEA + I+ I LN +D S Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545 >AE014297-3168|AAN13906.1| 557|Drosophila melanogaster CG5374-PB, isoform B protein. Length = 557 Score = 27.9 bits (59), Expect = 4.1 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62 K+A + + Y N+ ++ E + L + G D+ +G++ D + S++ Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514 Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91 +L+ TEA + I+ I LN +D S Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545 >AE014297-3167|AAF56009.1| 557|Drosophila melanogaster CG5374-PA, isoform A protein. Length = 557 Score = 27.9 bits (59), Expect = 4.1 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 3 KNARPVSVTICEYSNNGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSR 62 K+A + + Y N+ ++ E + L + G D+ +G++ D + S++ Sbjct: 461 KDATDLVAKLRSYHNSSQTKPERSDLKWTGLDLIEGVVRDNKKAGVLEPAMSKI------ 514 Query: 63 SNLRKKTEALVK--SINGNINLNFDDTGSDS 91 +L+ TEA + I+ I LN +D S Sbjct: 515 KSLKFATEAAITILRIDDMIKLNPEDKSGKS 545 >X63503-1|CAA45074.1| 1002|Drosophila melanogaster yemanuclein-alpha protein. Length = 1002 Score = 27.5 bits (58), Expect = 5.4 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 66 RKKTEAL--VKSINGNINLN-FDDTGSDSTSIDKNFHARYGNN 105 +KKT+ L V + NG+ + + F D D I K A+YGN+ Sbjct: 80 KKKTKKLKQVSTTNGSASTDPFADNDDDVARIVKELEAKYGNS 122 >BT015223-1|AAT94452.1| 842|Drosophila melanogaster RE33235p protein. Length = 842 Score = 27.5 bits (58), Expect = 5.4 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 66 RKKTEAL--VKSINGNINLN-FDDTGSDSTSIDKNFHARYGNN 105 +KKT+ L V + NG+ + + F D D I K A+YGN+ Sbjct: 80 KKKTKKLKQVSTTNGSASTDPFADNDDDVARIVKELEAKYGNS 122 >AE014297-4321|AAF56858.2| 1002|Drosophila melanogaster CG14513-PA protein. Length = 1002 Score = 27.5 bits (58), Expect = 5.4 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 66 RKKTEAL--VKSINGNINLN-FDDTGSDSTSIDKNFHARYGNN 105 +KKT+ L V + NG+ + + F D D I K A+YGN+ Sbjct: 80 KKKTKKLKQVSTTNGSASTDPFADNDDDVARIVKELEAKYGNS 122 >X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.melanogaster white-one mutant DNA with Doc retroposon, inserted inwhite locuspromoter region. ). Length = 888 Score = 27.1 bits (57), Expect = 7.2 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 18 NGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSRSNLRKKTEALVKSIN 77 N N+ P L F GT+ PDG G I I NR++ ++ L+ + AL + N Sbjct: 42 NKNNFHIPGYL-FYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-N 99 Query: 78 GNINL 82 G+ L Sbjct: 100 GSTTL 104 >AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein. Length = 888 Score = 27.1 bits (57), Expect = 7.2 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 18 NGNSRREPTKLDFLGTDMPDGILSDGNDIPITNRLQSELALTLSRSNLRKKTEALVKSIN 77 N N+ P L F GT+ PDG G I I NR++ ++ L+ + AL + N Sbjct: 42 NKNNFHIPGYL-FYGTNHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-N 99 Query: 78 GNINL 82 G+ L Sbjct: 100 GSTTL 104 >AY060618-1|AAL28166.1| 665|Drosophila melanogaster GH04232p protein. Length = 665 Score = 26.6 bits (56), Expect = 9.5 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 5/43 (11%) Query: 43 GNDIPITNRLQSELALTLSRSNLRKKTE-----ALVKSINGNI 80 GN++ I N L+S+ A + +++ + +TE ALVK + GN+ Sbjct: 290 GNELEIVNCLRSKSAEDIIKNDDKVQTERLAGRALVKGLTGNV 332 >AE014134-235|AAF51389.1| 665|Drosophila melanogaster CG5397-PA protein. Length = 665 Score = 26.6 bits (56), Expect = 9.5 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 5/43 (11%) Query: 43 GNDIPITNRLQSELALTLSRSNLRKKTE-----ALVKSINGNI 80 GN++ I N L+S+ A + +++ + +TE ALVK + GN+ Sbjct: 290 GNELEIVNCLRSKSAEDIIKNDDKVQTERLAGRALVKGLTGNV 332 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.309 0.129 0.353 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,670,889 Number of Sequences: 52641 Number of extensions: 211551 Number of successful extensions: 385 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 384 Number of HSP's gapped (non-prelim): 12 length of query: 124 length of database: 24,830,863 effective HSP length: 76 effective length of query: 48 effective length of database: 20,830,147 effective search space: 999847056 effective search space used: 999847056 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.7 bits) S2: 56 (26.6 bits)
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