Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000928-TA|BGIBMGA000928-PA|IPR001478|PDZ/DHR/GLGF
(535 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g05140.1 68414.m00517 membrane-associated zinc metalloproteas... 33 0.48
At4g17740.2 68417.m02649 C-terminal processing protease, putativ... 32 1.1
At4g17740.1 68417.m02648 C-terminal processing protease, putativ... 32 1.1
At5g15730.1 68418.m01840 serine/threonine protein kinase, putati... 31 1.9
At1g26090.1 68414.m03182 hypothetical protein 30 3.4
At2g32480.2 68415.m03969 membrane-associated zinc metalloproteas... 30 4.4
At2g32480.1 68415.m03968 membrane-associated zinc metalloproteas... 30 4.4
At5g62480.2 68418.m07842 glutathione S-transferase, putative 29 5.9
At5g62480.1 68418.m07841 glutathione S-transferase, putative 29 5.9
>At1g05140.1 68414.m00517 membrane-associated zinc metalloprotease,
putative similar to Hypothetical zinc metalloprotease
All3971 (SP:Q8YQ64) [strain PCC 7120] {Anabaena sp.};
Similar to Synechocystis hypothetical protein
(gb|D90908);contains Pfam PF00595: PDZ domain (Also
known as DHR or GLGF); contains TIGRFAM TIGR00054:
membrane-associated zinc metalloprotease, putative
Length = 441
Score = 33.1 bits (72), Expect = 0.48
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 175 PGIFVQFVREGGIAREAGLRPGDQILSCNGTDFGN 209
PG+ V V+ A GL PGD IL+ +GT+ N
Sbjct: 205 PGVLVPDVKSFSAASRDGLLPGDVILAVDGTELSN 239
>At4g17740.2 68417.m02649 C-terminal processing protease, putative
similar to C-terminal protease precursor [Spinacia
oleracea] GI:999435; similar to SP|Q44879| (Bartonella
bacilliformis)
Length = 505
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 176 GIFVQFVREGGIAREAGLRPGDQILSCNGTDFGNIAFNEAITAMKAT--GRLELVIREGA 233
G+ V GG A AG+ PGD I + T + +A ++ +EL IR G
Sbjct: 218 GLVVISAAPGGPANRAGILPGDVIQGIDNTTTETLTIYDAAQMLQGPEGSAVELAIRSGP 277
Query: 234 GTELV 238
T L+
Sbjct: 278 ETRLL 282
>At4g17740.1 68417.m02648 C-terminal processing protease, putative
similar to C-terminal protease precursor [Spinacia
oleracea] GI:999435; similar to SP|Q44879| (Bartonella
bacilliformis)
Length = 515
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 176 GIFVQFVREGGIAREAGLRPGDQILSCNGTDFGNIAFNEAITAMKAT--GRLELVIREGA 233
G+ V GG A AG+ PGD I + T + +A ++ +EL IR G
Sbjct: 228 GLVVISAAPGGPANRAGILPGDVIQGIDNTTTETLTIYDAAQMLQGPEGSAVELAIRSGP 287
Query: 234 GTELV 238
T L+
Sbjct: 288 ETRLL 292
>At5g15730.1 68418.m01840 serine/threonine protein kinase, putative
similar to protein-serine/threonine kinase [Nicotiana
tabacum] gi|505146|dbj|BAA06538
Length = 434
Score = 31.1 bits (67), Expect = 1.9
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 46 LRGGKEYGSGFFISKVEFNSEAHLQGLKVGDQLVSVNGYRVDDAVHGELIHYLASQSRLK 105
L K +GS EF +E L G LV++ GY VD + H LI+ S L+
Sbjct: 138 LAAAKVHGSNSSQGDREFQTEVSLLGRLHHRNLVNLTGYCVDKS-HRMLIYEFMSNGSLE 196
Query: 106 IKVRRKYSTKGHEALSWQFVSERASLGSDVSSSPTLCHD 144
Y G + L+W+ ER + D+S H+
Sbjct: 197 ---NLLYG--GMQVLNWE---ERLQIALDISHGIEYLHE 227
>At1g26090.1 68414.m03182 hypothetical protein
Length = 455
Score = 30.3 bits (65), Expect = 3.4
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 131 LGSDVSSSPTLCHDTEGLVDLRLS-ILVPPRAKLGCGICKGPEWKPGIFVQFVREGGIAR 189
LGS + +SPTL +D ++ L + +L+ P +L K + + + Q V EG +
Sbjct: 104 LGSKIGTSPTLINDNLSVIRLETTKMLLEPLKQL-----KQADARLNM-TQGVLEGVVGE 157
Query: 190 EAGLRPG-DQILSCNGTDFGNIAFNEAITAMKATGR-LELVIREGAGTE 236
E G+ PG D I S + + F T G+ +++I +G TE
Sbjct: 158 ELGVLPGMDSIFSMLELE-RLVGFFRQATRKNHKGKPFDVIIYDGISTE 205
>At2g32480.2 68415.m03969 membrane-associated zinc metalloprotease,
putative similar to Hypothetical zinc metalloprotease
All3971 (SP:Q8YQ64) [strain PCC 7120] {Anabaena sp.}
Pfam PF00595: PDZ domain (Also known as DHR or GLGF);
contains TIGRFAM TIGR00054: membrane-associated zinc
metalloprotease, putative
Length = 410
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 175 PGIFVQFVREGGIAREAGLRPGDQILSCNGTDF---GNIAFNEAITAMKATGRLELVIRE 231
PG+ V V+ A GL GD IL+ +GT+ G A ++ + +K + +V R
Sbjct: 211 PGVLVPEVKTFSAASRDGLLSGDVILAVDGTELSKTGPDAVSKIVDIVKRNPKSNVVFRI 270
Query: 232 GAGTE 236
G E
Sbjct: 271 ERGGE 275
>At2g32480.1 68415.m03968 membrane-associated zinc metalloprotease,
putative similar to Hypothetical zinc metalloprotease
All3971 (SP:Q8YQ64) [strain PCC 7120] {Anabaena sp.}
Pfam PF00595: PDZ domain (Also known as DHR or GLGF);
contains TIGRFAM TIGR00054: membrane-associated zinc
metalloprotease, putative
Length = 447
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 175 PGIFVQFVREGGIAREAGLRPGDQILSCNGTDF---GNIAFNEAITAMKATGRLELVIRE 231
PG+ V V+ A GL GD IL+ +GT+ G A ++ + +K + +V R
Sbjct: 211 PGVLVPEVKTFSAASRDGLLSGDVILAVDGTELSKTGPDAVSKIVDIVKRNPKSNVVFRI 270
Query: 232 GAGTE 236
G E
Sbjct: 271 ERGGE 275
>At5g62480.2 68418.m07842 glutathione S-transferase, putative
Length = 214
Score = 29.5 bits (63), Expect = 5.9
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 109 RRKYSTKGHEALSWQFVSERASLGSDVSSSPTLCHDTEGLVDLRLSILVPP----RAKLG 164
++K T+ E LS + SD PT+ ++T LVD+ + L+ P LG
Sbjct: 99 QKKALTEVKEKLSVIEKEGLKEIFSDTDGEPTVTNETMSLVDIVMCTLLSPYKAHEEVLG 158
Query: 165 CGICKGPEWKPGIF--VQFVREGGIAREAGLRPGDQIL 200
I PE PG++ + + E + ++ P +QIL
Sbjct: 159 LKII-DPEIVPGVYGWINAINETSVVKDLS-PPYEQIL 194
>At5g62480.1 68418.m07841 glutathione S-transferase, putative
Length = 240
Score = 29.5 bits (63), Expect = 5.9
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 109 RRKYSTKGHEALSWQFVSERASLGSDVSSSPTLCHDTEGLVDLRLSILVPP----RAKLG 164
++K T+ E LS + SD PT+ ++T LVD+ + L+ P LG
Sbjct: 125 QKKALTEVKEKLSVIEKEGLKEIFSDTDGEPTVTNETMSLVDIVMCTLLSPYKAHEEVLG 184
Query: 165 CGICKGPEWKPGIF--VQFVREGGIAREAGLRPGDQIL 200
I PE PG++ + + E + ++ P +QIL
Sbjct: 185 LKII-DPEIVPGVYGWINAINETSVVKDLS-PPYEQIL 220
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.132 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,634,665
Number of Sequences: 28952
Number of extensions: 417920
Number of successful extensions: 865
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 864
Number of HSP's gapped (non-prelim): 9
length of query: 535
length of database: 12,070,560
effective HSP length: 84
effective length of query: 451
effective length of database: 9,638,592
effective search space: 4347004992
effective search space used: 4347004992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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