Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000926-TA|BGIBMGA000926-PA|IPR001585|Transaldolase,
IPR004730|Transaldolase AB
(332 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 354 9e-99
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 28 2.1
SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4 desaturase... 27 4.9
SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces... 27 4.9
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 26 6.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 6.5
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 26 8.6
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 26 8.6
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 26 8.6
>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 322
Score = 354 bits (871), Expect = 9e-99
Identities = 184/321 (57%), Positives = 226/321 (70%), Gaps = 4/321 (1%)
Query: 12 MSALDQLKQHSTVV-ADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGK 70
MS+L+QLK TVV +DTGDFE++ +YKP DATTNPSLIL+A+ QY ++D A+ Y K
Sbjct: 1 MSSLEQLKATGTVVVSDTGDFESIAKYKPQDATTNPSLILAASKKPQYAALVDAAVDYAK 60
Query: 71 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFA 130
G SI Q+ D L + FG +IL I+PGRVS EVDAR SFD +I KA I L+
Sbjct: 61 AKGGSINSQIEIAFDRLLIEFGTKILAIVPGRVSTEVDARYSFDTQTTIEKARHLIKLYE 120
Query: 131 EHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFV 190
GI +ER+LIK+AST+EGIQAAK+LE++ GIHCNLTLLFS QA+ACAEANVTLISPFV
Sbjct: 121 AEGIGRERVLIKIASTYEGIQAAKQLEEE-GIHCNLTLLFSFVQAVACAEANVTLISPFV 179
Query: 191 GRILDWYVEHTKKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIRELAGCD 250
GRILD+Y + Y +EDPGVVSV+ I+NYYKKFGYKT VMGASFRN GEI+ELAG D
Sbjct: 180 GRILDFYKAKNNRDYTAQEDPGVVSVSNIFNYYKKFGYKTIVMGASFRNVGEIKELAGVD 239
Query: 251 LLTISPKLLQELASSXXXXXXXXXXXXXXXNDIEKIS-LT-ESEFRWHLNEDHMATDKLS 308
LTISP LL++L +S ++EK+S LT E +FR+ N D MA KLS
Sbjct: 240 FLTISPALLEQLNNSTDAVPKKLDASKASSLNLEKVSYLTDEPKFRFDFNNDEMAVVKLS 299
Query: 309 DGIRRFAADTRKLESLIKTLL 329
GI FA D L +++K L
Sbjct: 300 TGIAAFAKDADTLRTILKAKL 320
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 2.1
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 141 IKLASTWEGIQAAKELEK-KHGIHCNLTLLFSLYQAIACAEANVTLISPFVGRILDWYVE 199
+K+AS E I+ A+ K K+ I+ + L Q + E N S + R+L+ Y++
Sbjct: 131 LKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNG---SGIIIRLLNQYID 187
Query: 200 H--TKKTYEGKEDPGVVSV 216
T EGKEDP V +V
Sbjct: 188 IKITMPQVEGKEDPNVQAV 206
>SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4
desaturase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 362
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 160 HGIHCNLTLLFSLYQAIACAEANVTLISPFVGRILDWYVEHTKKTYEG 207
H + NL +LY C AN+ + +PF +++EH Y+G
Sbjct: 110 HELSHNLGFKKTLYNRAYCLFANLPVGAPFAASFRPYHMEH--HAYQG 155
>SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 161 GIHCNLTLLFSLYQAIACAEANVTLISPFVGRILDWYVEHTKKTYEGKEDPGVV 214
GI C L FSL A+ +EA+V F+ IL E ++D GVV
Sbjct: 152 GIKCESILCFSLLTALLDSEADVIEFGDFLISIL----ESDGAVVNSEDDEGVV 201
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 23 TVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGSSIEEQVAE 82
T +AD + + + D T L+L + G+E Y D A N S+EE + +
Sbjct: 273 TTIADYKEVAIQNKIEDDDTWTAQELVLLSEGVEMYSD--DWAKVASHVNTKSVEECILK 330
Query: 83 TLDMLS 88
L++ S
Sbjct: 331 FLNLPS 336
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 128 LFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNL 166
L +G K I++ + T + IQ L +KH IHC+L
Sbjct: 788 LIKSNGFKGLPIVVIKSITRQLIQCLTLLNEKHVIHCDL 826
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 291 SEFRWHLNEDHMATDKLSDGIRRFAADTRKLESLIKTLL 329
S+F+W N ++ + + D R + RK++ +IK ++
Sbjct: 190 SKFKWDSNNNNDWSSLMKDCFRDVVNNNRKMKEIIKDVM 228
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 200 HTKKTYEGKEDPGVVSVTKIYNYYKKFGYK 229
HT T EG+E+ G VS T + + ++ K
Sbjct: 301 HTGNTGEGREEEGPVSFTALRSTFRNMDLK 330
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 124 KFINLFAEHGIKKERI-LIKLASTWEGIQAA 153
+ ++LF+ HG++KE + L+ AS + IQ A
Sbjct: 216 RILSLFSFHGVRKESLELLWRASKYPNIQGA 246
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,374,431
Number of Sequences: 5004
Number of extensions: 54527
Number of successful extensions: 157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 149
Number of HSP's gapped (non-prelim): 9
length of query: 332
length of database: 2,362,478
effective HSP length: 73
effective length of query: 259
effective length of database: 1,997,186
effective search space: 517271174
effective search space used: 517271174
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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