GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000926-TA|BGIBMGA000926-PA|IPR001585|Transaldolase,
IPR004730|Transaldolase AB
         (332 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3740|AAF47106.2|  331|Drosophila melanogaster CG2827-PA...   443   e-124
AY118920-1|AAM50780.1|  320|Drosophila melanogaster LD23608p pro...   437   e-123
AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p pro...    30   3.9  
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P...    30   3.9  
BT010249-1|AAQ23567.1|  526|Drosophila melanogaster RE39287p pro...    30   5.1  

>AE013599-3740|AAF47106.2|  331|Drosophila melanogaster CG2827-PA
           protein.
          Length = 331

 Score =  443 bits (1091), Expect = e-124
 Identities = 215/330 (65%), Positives = 254/330 (76%), Gaps = 1/330 (0%)

Query: 1   MSGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQH 60
           M  +   K+ KMS L +LK+ +T+VADTGDFEA+  YKPTDATTNPSLILSA+ ME+YQ 
Sbjct: 1   MGSDRTLKKQKMSVLQELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQP 60

Query: 61  ILDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIA 120
           ++ KA++Y K    S+ EQVAE +D L VLFG EILK++PGRVS E+DARLSFD   S+ 
Sbjct: 61  LVQKAVEYAKGKKGSVSEQVAEAMDYLCVLFGTEILKVVPGRVSTEIDARLSFDTKKSVE 120

Query: 121 KAIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAE 180
           KA+K I L+   G+ KERILIKLASTWEGI+AA+ LE +HG+HCNLTLLFS  QA+ACAE
Sbjct: 121 KALKLIALYKSLGVDKERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAE 180

Query: 181 ANVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRN 239
           A VTLISPFVGRILDWYV +T  K +E  +DPGV+SVT IYNYYKKFGYKT VMGASFRN
Sbjct: 181 AGVTLISPFVGRILDWYVANTDTKKFEALKDPGVISVTNIYNYYKKFGYKTLVMGASFRN 240

Query: 240 TGEIRELAGCDLLTISPKLLQELASSXXXXXXXXXXXXXXXNDIEKISLTESEFRWHLNE 299
            GEI+ LAGCDLLTISP LL+EL +                 DIEKI++ ES FRW LNE
Sbjct: 241 VGEIKALAGCDLLTISPALLKELENETESVVTYLSVSNAKLQDIEKITVDESRFRWLLNE 300

Query: 300 DHMATDKLSDGIRRFAADTRKLESLIKTLL 329
           D MATDKLS+GIR+FA DT KLE+LIKT L
Sbjct: 301 DAMATDKLSEGIRKFAVDTVKLENLIKTYL 330


>AY118920-1|AAM50780.1|  320|Drosophila melanogaster LD23608p
           protein.
          Length = 320

 Score =  437 bits (1077), Expect = e-123
 Identities = 212/319 (66%), Positives = 249/319 (78%), Gaps = 1/319 (0%)

Query: 12  MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 71
           MS L +LK+ +T+VADTGDFEA+  YKPTDATTNPSLILSA+ ME+YQ ++ KA++Y K 
Sbjct: 1   MSVLQELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQPLVQKAVEYAKG 60

Query: 72  NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 131
              S+ EQVAE +D L VLFG EILK++PGRVS E+DARLSFD   S+ KA+K I L+  
Sbjct: 61  KKGSVSEQVAEAMDYLCVLFGTEILKVVPGRVSTEIDARLSFDTKKSVEKALKLIALYKS 120

Query: 132 HGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFVG 191
            G+ KERILIKLASTWEGI+AA+ LE +HG+HCNLTLLFS  QA+ACAEA VTLISPFVG
Sbjct: 121 LGVDKERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVG 180

Query: 192 RILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTGEIRELAGCD 250
           RILDWYV +T  K +E  +DPGV+SVT IYNYYKKFGYKT VMGASFRN GEI+ LAGCD
Sbjct: 181 RILDWYVANTDTKKFEALKDPGVISVTNIYNYYKKFGYKTLVMGASFRNVGEIKALAGCD 240

Query: 251 LLTISPKLLQELASSXXXXXXXXXXXXXXXNDIEKISLTESEFRWHLNEDHMATDKLSDG 310
           LLTISP LL+EL +                 DIEKI++ ES FRW LNED MATDKLS+G
Sbjct: 241 LLTISPALLKELENETESVVTYLSVSNAKLQDIEKITVDESRFRWLLNEDAMATDKLSEG 300

Query: 311 IRRFAADTRKLESLIKTLL 329
           IR+FA DT KLE+LIKT L
Sbjct: 301 IRKFAVDTVKLENLIKTYL 319


>AY095055-1|AAM11383.1| 1349|Drosophila melanogaster LD43045p
           protein.
          Length = 1349

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 62  LDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAK 121
           L +  +  K N S  EE+   T   + V+   +I++++ G  + +V     F+  A + +
Sbjct: 213 LQQESQLNKSNSSDAEEEYVPTAQFVPVIALPDIVEVVTGEENEDV----LFEHRAKLLR 268

Query: 122 AIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLL 169
             K  N + E G+   + L++  +    ++     E+ H + CN  LL
Sbjct: 269 WDKEANEWKERGLGNMK-LLRDRTDPNKVRLLMRREQVHKLCCNQRLL 315


>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
            protein.
          Length = 2695

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 62   LDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAK 121
            L +  +  K N S  EE+   T   + V+   +I++++ G  + +V     F+  A + +
Sbjct: 1582 LQQESQLNKSNSSDAEEEYVPTAQFVPVIALPDIVEVVTGEENEDV----LFEHRAKLLR 1637

Query: 122  AIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLL 169
              K  N + E G+   + L++  +    ++     E+ H + CN  LL
Sbjct: 1638 WDKEANEWKERGLGNMK-LLRDRTDPNKVRLLMRREQVHKLCCNQRLL 1684


>BT010249-1|AAQ23567.1|  526|Drosophila melanogaster RE39287p
           protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 15/56 (26%), Positives = 26/56 (46%)

Query: 21  HSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGSSI 76
           H  V  D+GD    + YK T + +N S + ++A     Q ++ +  + G   G  I
Sbjct: 102 HFLVNKDSGDKSDEENYKATSSNSNESNVQASAHKGDRQKLISEVAQVGDSKGGRI 157


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.132    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,055,618
Number of Sequences: 52641
Number of extensions: 536268
Number of successful extensions: 1312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1307
Number of HSP's gapped (non-prelim): 5
length of query: 332
length of database: 24,830,863
effective HSP length: 85
effective length of query: 247
effective length of database: 20,356,378
effective search space: 5028025366
effective search space used: 5028025366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)