GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000926-TA|BGIBMGA000926-PA|IPR001585|Transaldolase,
IPR004730|Transaldolase AB
         (332 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 211 PGVV--SVTKIYNYYKKFGYKTQVMGASFRNTGEIRELA 247
           PGVV   V+     Y KF     + G +F  TG  ++LA
Sbjct: 165 PGVVYKCVSDNGESYAKFTISVTIDGETFEGTGPSKKLA 203


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 204 TYEGKEDPGVVSVTKIYNYYKKFGYKTQVMGASFRNTG 241
           TY G E+ G+V  T IY Y  + G +T     +  N G
Sbjct: 389 TYYG-EEIGMVDNTTIYKYDVRDGCRTPFQWDNSINAG 425


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.132    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,448
Number of Sequences: 429
Number of extensions: 2892
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 332
length of database: 140,377
effective HSP length: 58
effective length of query: 274
effective length of database: 115,495
effective search space: 31645630
effective search space used: 31645630
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)