Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000925-TA|BGIBMGA000925-PA|IPR006811|Ssu72-like protein
(179 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BZS6 Cluster: SSU72 RNA polymerase II CTD phosphatase... 244 7e-64
UniRef50_Q22453 Cluster: Putative uncharacterized protein; n=2; ... 211 6e-54
UniRef50_UPI00005A3F7F Cluster: PREDICTED: similar to Ssu72 RNA ... 178 7e-44
UniRef50_O42868 Cluster: RNA polymerase II subunit A C-terminal ... 176 3e-43
UniRef50_UPI0000F31DDA Cluster: UPI0000F31DDA related cluster; n... 167 1e-40
UniRef50_P53538 Cluster: RNA polymerase II subunit A C-terminal ... 161 1e-38
UniRef50_Q4RXN5 Cluster: Chromosome 11 SCAF14979, whole genome s... 160 1e-38
UniRef50_Q2QX64 Cluster: Ssu72-like protein, expressed; n=3; Ory... 153 2e-36
UniRef50_Q558Z3 Cluster: Putative uncharacterized protein; n=1; ... 149 5e-35
UniRef50_Q5SV18 Cluster: SSU72 RNA polymerase II CTD phosphatase... 149 5e-35
UniRef50_Q8SRQ6 Cluster: SSU72 PROTEIN HOMOLOG; n=1; Encephalito... 139 4e-32
UniRef50_Q6BYP7 Cluster: RNA polymerase II subunit A C-terminal ... 134 1e-30
UniRef50_Q00U02 Cluster: Protein involved in transcription start... 128 1e-28
UniRef50_UPI00004982BE Cluster: conserved hypothetical protein; ... 126 4e-28
UniRef50_Q4WHY5 Cluster: RNA polymerase II subunit A C-terminal ... 126 4e-28
UniRef50_A2FVC5 Cluster: SSU72 protein-related protein; n=1; Tri... 101 1e-20
UniRef50_Q9H933 Cluster: CDNA FLJ13048 fis, clone NT2RP3001399, ... 87 3e-16
UniRef50_UPI0000F20D86 Cluster: PREDICTED: hypothetical protein;... 82 6e-15
UniRef50_A7AZY7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.71
UniRef50_Q6F7W4 Cluster: Putative uncharacterized protein; n=2; ... 35 0.94
UniRef50_A0UUR8 Cluster: Copper amine oxidase-like precursor; n=... 35 0.94
UniRef50_UPI00006CEB56 Cluster: hypothetical protein TTHERM_0037... 35 1.2
UniRef50_Q8N3P4-2 Cluster: Isoform 2 of Q8N3P4 ; n=2; Catarrhini... 33 2.9
UniRef50_Q93GC2 Cluster: GlyA; n=1; Xanthomonas campestris|Rep: ... 33 2.9
UniRef50_A5GAI1 Cluster: Putative uncharacterized protein precur... 33 2.9
UniRef50_Q6EQG2 Cluster: Probable NADH kinase; n=6; Oryza sativa... 33 2.9
UniRef50_UPI0000499114 Cluster: hypothetical protein 28.t00032; ... 33 3.8
UniRef50_A0Q5G6 Cluster: Putative uncharacterized protein; n=7; ... 33 3.8
UniRef50_Q23B16 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q6C425 Cluster: Similar to DEHA0F21252g Debaryomyces ha... 33 3.8
UniRef50_A5E7R8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q8IFP9 Cluster: Putative uncharacterized protein PFD103... 33 5.0
UniRef50_Q8I5D0 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q891C1 Cluster: Conserved protein; n=5; Clostridium|Rep... 32 6.6
UniRef50_A7AZP9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_A0DWS5 Cluster: Chromosome undetermined scaffold_67, wh... 32 6.6
UniRef50_Q15ZQ7 Cluster: Putative uncharacterized protein precur... 32 8.7
>UniRef50_Q9BZS6 Cluster: SSU72 RNA polymerase II CTD phosphatase
homolog; n=70; Eukaryota|Rep: SSU72 RNA polymerase II
CTD phosphatase homolog - Homo sapiens (Human)
Length = 194
Score = 244 bits (598), Expect = 7e-64
Identities = 108/178 (60%), Positives = 138/178 (77%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYY 61
NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F YD++YNDL+ KDK Y
Sbjct: 17 NRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELY 76
Query: 62 TQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHV 121
TQNG+LHMLDRN+RIKP PE+FQ C + FD+I+TCEERVYDQV+E SR QPVHV
Sbjct: 77 TQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDLNSREQETCQPVHV 136
Query: 122 VNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY 179
VN+DIQDNHEEAT+GAFLI ++ + ++D++N+IDELL EFE + R L+ + FY
Sbjct: 137 VNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEERVGRTFLHTVCFY 194
>UniRef50_Q22453 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 235
Score = 211 bits (516), Expect = 6e-54
Identities = 94/181 (51%), Positives = 131/181 (72%), Gaps = 2/181 (1%)
Query: 1 MNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFG-VLYDEIYNDLMEKDKN 59
MNRSMEAH L K+GFN++SYG+G +VK+PG + D+PNCYEFG Y++IY DL KD +
Sbjct: 55 MNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGPTTYEDIYADLTNKDLH 114
Query: 60 YYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPV 119
YTQNGLLHM+DRNRRIK P++FQ FD+++ EERV+DQV+++ PV
Sbjct: 115 LYTQNGLLHMVDRNRRIKSRPQRFQAETREFDIVLCLEERVFDQVVDFLNRSVGKSGNPV 174
Query: 120 HVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEF-ESKCHRPILNCIMF 178
HV+NIDI+DN EEAT GAF ++D+ K+ +S+D + DID+++ + E+ R +L+ I F
Sbjct: 175 HVINIDIEDNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEENNPKRNLLHTICF 234
Query: 179 Y 179
Y
Sbjct: 235 Y 235
>UniRef50_UPI00005A3F7F Cluster: PREDICTED: similar to Ssu72 RNA
polymerase II CTD phosphatase homolog; n=3;
Laurasiatheria|Rep: PREDICTED: similar to Ssu72 RNA
polymerase II CTD phosphatase homolog - Canis familiaris
Length = 246
Score = 178 bits (433), Expect = 7e-44
Identities = 83/173 (47%), Positives = 116/173 (67%)
Query: 1 MNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNY 60
MNRSMEAH L K+GF V+S+G +VKLPG + P Y+F Y ++Y DL K++
Sbjct: 41 MNRSMEAHDILQKRGFCVRSFGVARQVKLPGLIRNCPVLYDFSTTYKQMYKDLWRKNREC 100
Query: 61 YTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVH 120
Y+ NG+L +L RN+RIKP PE+FQ C++ FDVI TCEERVYD+V++ +R QP+H
Sbjct: 101 YSSNGILQLLGRNQRIKPHPERFQECSDPFDVIFTCEERVYDRVVQDLCAREQATFQPLH 160
Query: 121 VVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPIL 173
VVN+DI D EEAT+GAFLI + + Q+ D+++ + +LL E K + L
Sbjct: 161 VVNVDIVDTLEEATLGAFLIYRLCQSLQQAGDMEDSLGQLLLAAEEKTGKSFL 213
>UniRef50_O42868 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase ssu72; n=7; Fungi/Metazoa group|Rep:
RNA polymerase II subunit A C-terminal domain
phosphatase ssu72 - Schizosaccharomyces pombe (Fission
yeast)
Length = 197
Score = 176 bits (428), Expect = 3e-43
Identities = 84/180 (46%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYY 61
NRSMEAH L G+ V S+GTG V+LPG S D+PN Y+FG YDEIY +L +D Y
Sbjct: 18 NRSMEAHNVLKNAGYQVDSFGTGSAVRLPGPSIDKPNIYQFGYPYDEIYKELEAQDSRLY 77
Query: 62 TQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHV 121
T NGLL MLDRNRRIK P ++Q + ++++ITCEER YD + E R N+PV++
Sbjct: 78 TANGLLKMLDRNRRIKRAPCRWQDQDSIYNIVITCEERCYDAICEDLYRRGETLNRPVYL 137
Query: 122 VNIDIQDNHEEATIGAFLISDMVTKMAQSDD-LDNDIDELLHEFESKCHR-PILNCIMFY 179
+N+DI+DNHEEA++G I D+V K+ ++ D L+ ++ +F+S + P+L I F+
Sbjct: 138 INVDIKDNHEEASVGGKAILDLVNKLTEAQDKLEELFPSIMADFQSNHPKLPVLYTIHFF 197
>UniRef50_UPI0000F31DDA Cluster: UPI0000F31DDA related cluster; n=1;
Bos taurus|Rep: UPI0000F31DDA UniRef100 entry - Bos
Taurus
Length = 218
Score = 167 bits (406), Expect = 1e-40
Identities = 73/143 (51%), Positives = 100/143 (69%)
Query: 1 MNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNY 60
MNRSMEAH L +KGF V+S+G G +V+LPG + + P Y F Y+E+ DL+ KD+
Sbjct: 19 MNRSMEAHRILRRKGFRVRSFGAGSRVRLPGRARNLPVVYNFSTTYEEMRKDLVRKDRQR 78
Query: 61 YTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVH 120
Y NG+LH+L RN RIKP PE+FQ C + FDVI TC E VY++V+E R QPVH
Sbjct: 79 YNSNGILHILGRNERIKPRPERFQECRDHFDVIFTCAESVYNKVVEELWVREQETFQPVH 138
Query: 121 VVNIDIQDNHEEATIGAFLISDM 143
V+N+D+ DN E+AT+G+F+I ++
Sbjct: 139 VINVDMADNLEDATLGSFIICEL 161
>UniRef50_P53538 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase SSU72; n=7; Saccharomycetales|Rep:
RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 206
Score = 161 bits (390), Expect = 1e-38
Identities = 82/173 (47%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYY 61
NRSME+H L + G+NV SYGTG V+LPG S D+PN Y FG Y++IYNDL+ + + Y
Sbjct: 20 NRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYNDIYNDLLSQSADRY 79
Query: 62 TQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHV 121
NGLL MLDRNRR+K PEK+Q + FD + TCEER +D V E +R N+ VHV
Sbjct: 80 KSNGLLQMLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFDAVCEDLMNRGGKLNKIVHV 139
Query: 122 VNIDIQDNHEEATIG--AFL-ISDMVT---KMAQSDDL--DNDIDELLHEFES 166
+N+DI+D+ E A IG A L ++DM+ + + DD+ ++ I ++L E++S
Sbjct: 140 INVDIKDDDENAKIGSKAILELADMLNDKIEQCEKDDIPFEDCIMDILTEWQS 192
>UniRef50_Q4RXN5 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 231
Score = 160 bits (389), Expect = 1e-38
Identities = 68/105 (64%), Positives = 86/105 (81%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYY 61
NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F Y ++YNDL+ KDK Y
Sbjct: 17 NRSMEAHNILSKRGFDVRSFGTGTHVKLPGPTPDKPNVYDFKTTYVQMYNDLVRKDKELY 76
Query: 62 TQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIE 106
TQNG+LHMLDRN+RIK PE+FQ C +RFD+++TCEERVYDQV+E
Sbjct: 77 TQNGILHMLDRNKRIKSKPERFQNCKDRFDLVVTCEERVYDQVVE 121
Score = 89.0 bits (211), Expect = 5e-17
Identities = 38/70 (54%), Positives = 53/70 (75%)
Query: 110 SRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCH 169
SR QPVHV+N+DIQDNHEEAT+GAFLI ++ + ++D++N+I+ELL EFE K +
Sbjct: 162 SREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIEHTEDMENEIEELLQEFEEKSN 221
Query: 170 RPILNCIMFY 179
RP L+ + FY
Sbjct: 222 RPFLHTVCFY 231
>UniRef50_Q2QX64 Cluster: Ssu72-like protein, expressed; n=3; Oryza
sativa|Rep: Ssu72-like protein, expressed - Oryza sativa
subsp. japonica (Rice)
Length = 200
Score = 153 bits (372), Expect = 2e-36
Identities = 79/182 (43%), Positives = 114/182 (62%), Gaps = 3/182 (1%)
Query: 1 MNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNY 60
MNRSMEAH+ L + G +V SYGTG VKLPG S PN Y+FG Y+ IY+DL KD +
Sbjct: 19 MNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVIYDDLRRKDPDL 78
Query: 61 YTQNGLLHMLDRNRRIKPCPEKFQ--VCNERFDVIITCEERVYDQVIEWFGSRRSIYNQP 118
Y +NGLL ML RN +K P+++Q + FDVI + EERV+D +++ +R +
Sbjct: 79 YKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHNREQRMLKN 138
Query: 119 VHVVNIDIQDNHEEATIGAFLISDMVTKMAQSD-DLDNDIDELLHEFESKCHRPILNCIM 177
++N+D++DNHEEA +GA L D+ K+ +D D + ID+L+ FE + R + +
Sbjct: 139 ALIINMDVKDNHEEAGVGAKLALDLCQKLEGADEDWEEIIDDLIITFEKQHKRKLTYNMA 198
Query: 178 FY 179
FY
Sbjct: 199 FY 200
>UniRef50_Q558Z3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 214
Score = 149 bits (360), Expect = 5e-35
Identities = 74/182 (40%), Positives = 114/182 (62%), Gaps = 4/182 (2%)
Query: 2 NRSMEAHAFLVKKGF-NVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNY 60
NRS+EAH VK GF N++S+GT KLPG S +PN + FG Y EIY L +D+
Sbjct: 33 NRSLEAHHLFVKNGFKNIRSFGTSAHCKLPGPSIHQPNIFSFGTPYQEIYTSLKNQDQEL 92
Query: 61 YTQNGLLHMLDRNRRIKPCPEKFQVCNE-RFDVIITCEERVYDQVIEWFGSR--RSIYNQ 117
Y +NGLL+ML+RN +K PEK+Q + +F+++ T ++RVYD VIE R S Q
Sbjct: 93 YIRNGLLNMLERNISVKLAPEKWQEEQQSKFEIVYTFDQRVYDAVIEDLLQRDVSSSLLQ 152
Query: 118 PVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIM 177
PVH++N+ ++D HEEA GA ++ + + ++ + + +D++L +F + R L+ +M
Sbjct: 153 PVHIINLQVKDTHEEAVGGAQHALEITSIIEKTLNWEEKLDQILEDFYKQTSRQFLHTLM 212
Query: 178 FY 179
FY
Sbjct: 213 FY 214
>UniRef50_Q5SV18 Cluster: SSU72 RNA polymerase II CTD phosphatase
homolog; n=9; Euteleostomi|Rep: SSU72 RNA polymerase II
CTD phosphatase homolog - Homo sapiens (Human)
Length = 111
Score = 149 bits (360), Expect = 5e-35
Identities = 67/111 (60%), Positives = 85/111 (76%)
Query: 69 MLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQD 128
MLDRN+RIKP PE+FQ C + FD+I+TCEERVYDQV+E SR QPVHVVN+DIQD
Sbjct: 1 MLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQD 60
Query: 129 NHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY 179
NHEEAT+GAFLI ++ + ++D++N+IDELL EFE K R L+ + FY
Sbjct: 61 NHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY 111
>UniRef50_Q8SRQ6 Cluster: SSU72 PROTEIN HOMOLOG; n=1;
Encephalitozoon cuniculi|Rep: SSU72 PROTEIN HOMOLOG -
Encephalitozoon cuniculi
Length = 193
Score = 139 bits (336), Expect = 4e-32
Identities = 70/169 (41%), Positives = 104/169 (61%), Gaps = 4/169 (2%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYY 61
NRSM+ H L KKG VKS+GT +KLPG + D+PN Y FGV Y +IY+DL K++++Y
Sbjct: 15 NRSMQTHDLLAKKGIPVKSFGTNPVIKLPGETMDKPNVYNFGVTYQQIYDDLCMKNEDHY 74
Query: 62 TQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHV 121
++G+L++L+RN +K PE F +E FD++ITCEERV+ + E++ S Q +
Sbjct: 75 RESGILYLLERNMGVKERPENFFQRSEDFDLVITCEERVFTSIFEYYADAPSC-TQCFFM 133
Query: 122 VNIDIQDNHEEATIGAFLISDMVTKMAQSDD--LDNDIDELLHE-FESK 167
VN DI+D +A GA I + V + ++ L+ +D L FE K
Sbjct: 134 VNFDIRDTPSDAIAGAQEILEFVEDVLAKEEERLEYAVDSALRRYFERK 182
>UniRef50_Q6BYP7 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase SSU72; n=4; Saccharomycetales|Rep:
RNA polymerase II subunit A C-terminal domain
phosphatase SSU72 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 223
Score = 134 bits (323), Expect = 1e-30
Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKD-KNY 60
NRSME+H L G+NV+S+GTG V+LPG D+PN YEFG YD+IY DL ++
Sbjct: 17 NRSMESHKQLKDAGYNVRSFGTGSAVRLPGPLVDKPNVYEFGTPYDDIYRDLTSQEYHKM 76
Query: 61 YTQNGLLHMLDRNRRIKPCPEKF--QVCNERFDVIITCEERVYDQVIEWFGSR------- 111
Y NGL+ M++RNR IK PEK+ +FD++ITCEER +D V++ R
Sbjct: 77 YESNGLIRMINRNRHIKRAPEKWHNNASAGKFDLVITCEERCFDLVLDDLMVRLVNKDQA 136
Query: 112 RSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESK 167
+ Q VH++NIDI+D++E A IG I +V + + + N L H+F+ +
Sbjct: 137 DTEIKQAVHIINIDIKDDYENAVIGGKGILKLVNMIHEFRN-TNKQRRLDHDFDDE 191
>UniRef50_Q00U02 Cluster: Protein involved in transcription start
site selection; n=2; Ostreococcus|Rep: Protein involved
in transcription start site selection - Ostreococcus
tauri
Length = 205
Score = 128 bits (308), Expect = 1e-28
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 9/186 (4%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEF-GVLYDEIYNDLMEKDKNY 60
NRSMEAH L++ GF+VKSYG +VKLPGAS D PN Y+F G Y+EI DL + ++
Sbjct: 21 NRSMEAHRVLLENGFDVKSYGAASRVKLPGASRDDPNVYDFDGTSYEEILRDLRSQSEDL 80
Query: 61 ---YTQNGLLHMLDRNRRIKPCPEKFQVCNER---FDVIITCEERVYDQVIEWFGSRRSI 114
Y + G+ ML RN +IK CPE+++ ER FDVI+ EERV+D V+ +
Sbjct: 81 VKNYEERGMFDMLVRNAKIKRCPERWKTHRERGETFDVIVCFEERVFDLVVMDLRAAGGA 140
Query: 115 YNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDD-LDNDIDELLHEFESKCHRPIL 173
+ + VVN+D++D++E + A + ++ + ++ + +ID ++ EFE + L
Sbjct: 141 RDAAL-VVNLDVRDSYEGSAEAAPRALRLCERLERCEEGWEGEIDSIVDEFEREEGLRAL 199
Query: 174 NCIMFY 179
C+ FY
Sbjct: 200 YCVCFY 205
>UniRef50_UPI00004982BE Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 201
Score = 126 bits (303), Expect = 4e-28
Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKN-- 59
NRS+ AH L + G+NV S+GTG LPGA+ R ++FG+ Y +I N L + + +
Sbjct: 24 NRSISAHCRLKQLGYNVSSFGTGVYTILPGAT--RNFGFQFGIPYKDIKNSLPKDEASVE 81
Query: 60 YYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPV 119
YY +N + MLDRN +K PEKFQ C + F++IIT + V+ V+E+F SR S
Sbjct: 82 YYRKNKIYQMLDRNANLKSAPEKFQDCKKEFNIIITLDYSVFMDVLEYFDSRESSTGSLC 141
Query: 120 HVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY 179
+V N+ + D + A GA +S+ + M D N+ID ++ F SK +L+ + Y
Sbjct: 142 YVFNLTVMDQLDTAEKGAIEVSEFLKLMESDSDWMNNIDHVIKSFYSKTKINVLHSMQMY 201
>UniRef50_Q4WHY5 Cluster: RNA polymerase II subunit A C-terminal
domain phosphatase ssu72; n=16; Pezizomycotina|Rep: RNA
polymerase II subunit A C-terminal domain phosphatase
ssu72 - Aspergillus fumigatus (Sartorya fumigata)
Length = 287
Score = 126 bits (303), Expect = 4e-28
Identities = 72/170 (42%), Positives = 98/170 (57%), Gaps = 24/170 (14%)
Query: 2 NRSMEAHAFL--VKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVL-YDEIYNDLMEKDK 58
NRSMEAH L F V S+GTG V+LPG S +PN Y F Y ++Y++L+ KD+
Sbjct: 64 NRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSYSQMYDELLAKDE 123
Query: 59 NYYTQNGLLHMLDRNRRIKPCPEKFQ---------------------VCNERFDVIITCE 97
Y NGLL+MLDRNR +K PE+FQ DVIITCE
Sbjct: 124 RLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGTVDVIITCE 183
Query: 98 ERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKM 147
ER +D V++ ++ + N+PVHV N+DI+DNHEEA +G I ++ T++
Sbjct: 184 ERCWDAVVDDLMNKGAALNRPVHVFNVDIRDNHEEALVGGKAILELATRL 233
>UniRef50_A2FVC5 Cluster: SSU72 protein-related protein; n=1;
Trichomonas vaginalis G3|Rep: SSU72 protein-related
protein - Trichomonas vaginalis G3
Length = 204
Score = 101 bits (241), Expect = 1e-20
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Query: 1 MNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNY 60
+NRSME H L + GFNV SYGT + VK+PGAS + P ++FG Y EI + + ++ Y
Sbjct: 17 VNRSMEGHRVLKEAGFNVSSYGTNDYVKMPGAS-NVPLQFDFGATYKEILSKMESENNQY 75
Query: 61 YTQNGLLHMLDRNRRIKPCPEKFQ-----VCNERFDVIITCEERVYDQVIEWFGSRRSIY 115
Y + GL+ ML + K PE++ + FDVI T + V D+V+ F +
Sbjct: 76 YEEQGLIKMLRDDANTKEKPERWSSTFNPATLKYFDVIFTYDNNVMDRVLNEFRENGNRT 135
Query: 116 NQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRP 171
Q HVVNI D+ + A + + ++ + DL +++ ++ +F + P
Sbjct: 136 FQISHVVNIQTPDSRDNAILSRQYTLRLAQMLSAATDLTENLESIVDQFNMENGNP 191
>UniRef50_Q9H933 Cluster: CDNA FLJ13048 fis, clone NT2RP3001399,
weakly similar to SSU72 PROTEIN (Ssu72 RNA polymerase
II CTD phosphatase homolog (Yeast), isoform CRA_a);
n=1; Homo sapiens|Rep: CDNA FLJ13048 fis, clone
NT2RP3001399, weakly similar to SSU72 PROTEIN (Ssu72
RNA polymerase II CTD phosphatase homolog (Yeast),
isoform CRA_a) - Homo sapiens (Human)
Length = 153
Score = 86.6 bits (205), Expect = 3e-16
Identities = 36/60 (60%), Positives = 46/60 (76%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYY 61
NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F YD++YNDL+ KDK Y
Sbjct: 17 NRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELY 76
>UniRef50_UPI0000F20D86 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 228
Score = 82.2 bits (194), Expect = 6e-15
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 2 NRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDK 58
NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F Y+++YNDL+ KDK
Sbjct: 17 NRSMEAHNILSKRGFDVRSFGTGTHVKLPGPAPDKPNIYDFKTTYEQMYNDLVRKDK 73
>UniRef50_A7AZY7 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 305
Score = 35.5 bits (78), Expect = 0.71
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 40 YEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEER 99
YEF V + Y D+++ KN+ ++ G+L++ + NR++ + F CN F ++ C
Sbjct: 118 YEFAVHETKTY-DVIQDVKNFKSEIGILYVNEFNRKV--LTKLFHECNLEFHELLKCSIY 174
Query: 100 VY 101
VY
Sbjct: 175 VY 176
>UniRef50_Q6F7W4 Cluster: Putative uncharacterized protein; n=2;
Acinetobacter|Rep: Putative uncharacterized protein -
Acinetobacter sp. (strain ADP1)
Length = 232
Score = 35.1 bits (77), Expect = 0.94
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 88 ERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHV-VNIDIQDNHEEATIGAFLISDMVTK 146
ERFDV+ ++ +Y + W G RSI V VN + + E +G +++
Sbjct: 146 ERFDVVKVRDDLLYLDLNRWLGKNRSIIETLAKVHVNHAVLRDAELVVMGNV---NLMAL 202
Query: 147 MAQSDDLDNDIDELLHEFESK 167
++S DLD++ +E L ES+
Sbjct: 203 FSKSSDLDDESEEKLEISESE 223
>UniRef50_A0UUR8 Cluster: Copper amine oxidase-like precursor; n=1;
Clostridium cellulolyticum H10|Rep: Copper amine
oxidase-like precursor - Clostridium cellulolyticum H10
Length = 934
Score = 35.1 bits (77), Expect = 0.94
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 88 ERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEA-TIGAFLISDMVTK 146
+R V + E ++VI+W S ++Y + +NI++++++E +G ++ ++ K
Sbjct: 110 QRLYVSVQVIESGLNKVIKWDSSENTLYISGQNTININVENSNESVIAVGNNILVNISNK 169
Query: 147 --MAQSDDLDNDIDELL 161
+ Q +D+ ND D++L
Sbjct: 170 YGVNQINDMINDADKIL 186
>UniRef50_UPI00006CEB56 Cluster: hypothetical protein
TTHERM_00370820; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00370820 - Tetrahymena
thermophila SB210
Length = 1792
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/63 (20%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 84 QVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVH-VVNIDIQDNHEEATIGAFLISD 142
+ C ++ +I C + Q++ +FG+++S + V+ + + I +NH+ + F++++
Sbjct: 447 KACKDKSQSLIVCSLTLLFQLLIYFGTQKSQFAPNVYRTLTLSIIENHQNVVVREFIMNN 506
Query: 143 MVT 145
+T
Sbjct: 507 FIT 509
>UniRef50_Q8N3P4-2 Cluster: Isoform 2 of Q8N3P4 ; n=2;
Catarrhini|Rep: Isoform 2 of Q8N3P4 - Homo sapiens
(Human)
Length = 1336
Score = 33.5 bits (73), Expect = 2.9
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 66 LLHMLDRNRRIKPCPE--KFQVCNERFDVIITC-EERVYDQVI 105
L H DR +K CP+ K QV + F V++ C E R+YD +I
Sbjct: 551 LFHYADR--ALKKCPDQGKIQVMEQHFQVVLMCWENRLYDAMI 591
>UniRef50_Q93GC2 Cluster: GlyA; n=1; Xanthomonas campestris|Rep:
GlyA - Xanthomonas campestris
Length = 374
Score = 33.5 bits (73), Expect = 2.9
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 13 KKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDR 72
+ GF VK Y TGE ++PGA P FG E +L K+ L H
Sbjct: 157 RPGFVVKDYDTGECWRVPGACPGYPENSTFGC--GESVAELQATRKSQIDPRRLFHNQQE 214
Query: 73 NRRIKPCPEKFQVCN-ERFDVIITCEERVY 101
K C + Q+ N + D++I R Y
Sbjct: 215 CIARKSCELRCQMDNCQWMDLVIPAFTRPY 244
>UniRef50_A5GAI1 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
Putative uncharacterized protein precursor - Geobacter
uraniumreducens Rf4
Length = 195
Score = 33.5 bits (73), Expect = 2.9
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 18 VKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIK 77
+ SYG G + L GA A P F L+D +++D + D +G H D N +
Sbjct: 114 IGSYGNGSHIDLSGAVASMPGNDFFDGLFDGLFDDFFDNDHGPGNNDGGGH--DNNAPV- 170
Query: 78 PCPEKF 83
P P F
Sbjct: 171 PEPASF 176
>UniRef50_Q6EQG2 Cluster: Probable NADH kinase; n=6; Oryza
sativa|Rep: Probable NADH kinase - Oryza sativa subsp.
japonica (Rice)
Length = 325
Score = 33.5 bits (73), Expect = 2.9
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 86 CNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGA--FLISDM 143
C + I C+ + + I+W +R+ + P+H V++ I + + A FL S +
Sbjct: 50 CRVHKETINLCKSVLQRKSIDWISVQRNDMSNPIHDVDLVISVGGDGTLLRASHFLNSSI 109
Query: 144 VTKMAQSD-DLDNDIDELLHEFESK 167
SD +++DEL EF+++
Sbjct: 110 PVLGVNSDPTCPDEVDELTDEFDAR 134
>UniRef50_UPI0000499114 Cluster: hypothetical protein 28.t00032;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 28.t00032 - Entamoeba histolytica HM-1:IMSS
Length = 310
Score = 33.1 bits (72), Expect = 3.8
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 11 LVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNGLLHML 70
L+ + F+ ++ K K +R N E ++ D + N++ E +NY G+ +
Sbjct: 186 LLSREFDYQTIINKLKTKKDVPQTERIN--ENDIIVDHLRNEIKEIKENYQQLEGIFNK- 242
Query: 71 DRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQ 117
+ +++K + V E DV+ + ++ DQ+++ S + I +
Sbjct: 243 -KTKQVKKLKSEKAVLQESIDVLESENRQLKDQIVQLQSSLKKIQEE 288
>UniRef50_A0Q5G6 Cluster: Putative uncharacterized protein; n=7;
Gammaproteobacteria|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida (strain
U112)
Length = 172
Score = 33.1 bits (72), Expect = 3.8
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 27 VKLPGASADRPN-CYEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQV 85
V L G A + N +EF + + EK K +N L D + C E +
Sbjct: 86 VNLGGYDASKLNELHEFALFVAADKTEAKEKAKQSLLKNSLYQHKDNLMEVDDCLELSSI 145
Query: 86 CNERFDVIITCEERVYDQVIEWFGSR 111
+ +I++ ++VYD +WFG R
Sbjct: 146 DGKYIHLILS--DKVYDLKPDWFGYR 169
>UniRef50_Q23B16 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 530
Score = 33.1 bits (72), Expect = 3.8
Identities = 10/34 (29%), Positives = 24/34 (70%)
Query: 84 QVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQ 117
+V E++D+I+ ++VY +W+G++ ++YN+
Sbjct: 119 EVAEEQYDLIVHMGDQVYLDSDQWYGNKNNVYNR 152
>UniRef50_Q6C425 Cluster: Similar to DEHA0F21252g Debaryomyces
hansenii IPF 6452.1; n=1; Yarrowia lipolytica|Rep:
Similar to DEHA0F21252g Debaryomyces hansenii IPF 6452.1
- Yarrowia lipolytica (Candida lipolytica)
Length = 1318
Score = 33.1 bits (72), Expect = 3.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 97 EERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDND 156
++R D +IE G+ + N + I QD+ E+ + AFL++ V Q +D D+D
Sbjct: 824 QKRAADSMIEPSGAAKRFRNSNQNNNAITAQDDGEDPILAAFLLAKQVISQTQQED-DDD 882
Query: 157 I 157
+
Sbjct: 883 V 883
>UniRef50_A5E7R8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 479
Score = 33.1 bits (72), Expect = 3.8
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 55 EKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEER-VYDQVIEWFGSRRS 113
E K Y Q LH D+N EKFQ E + V+ E R +YDQ +
Sbjct: 21 ELRKAYRKQAIRLHP-DKNGNDPKAAEKFQDLGEAYGVLSNAESRKLYDQYGKEGMKNNG 79
Query: 114 IYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDEL 160
P +ID + E G+ D + K+ DDL + L
Sbjct: 80 GVGGPDGEADIDPSEFFEMVFGGSVAFRDWIGKLGMMDDLTKSAEVL 126
>UniRef50_Q8IFP9 Cluster: Putative uncharacterized protein PFD1030c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFD1030c - Plasmodium falciparum
(isolate 3D7)
Length = 1686
Score = 32.7 bits (71), Expect = 5.0
Identities = 23/123 (18%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 56 KDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIY 115
++ N+YT L N+ K EK + E++ I ++ +++ + + Y
Sbjct: 276 QENNFYTVVENLKRDLTNQMKKKIREKKNIIKEKWTNIKNTFTQINEEMKLFISNFEKKY 335
Query: 116 NQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDID--ELLHEFESKCHRPIL 173
N+ ++++NI+ +D ++ T + + + ++ +N + +LL+ F + +
Sbjct: 336 NESINMINIETEDFEKKLTQNIYFNKIEINNLIHKENENNKLFFLQLLNSFNDYIMK-LY 394
Query: 174 NCI 176
NCI
Sbjct: 395 NCI 397
>UniRef50_Q8I5D0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3209
Score = 32.7 bits (71), Expect = 5.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 47 DEIYNDLMEKDKNYYTQ---NGLLHMLDRNRRIKPCPE 81
D +YND ++ +KNY Q N + M ++N R++ C E
Sbjct: 1927 DNMYNDTLQNNKNYIMQSRSNYNVEMFNKNNRLEDCEE 1964
>UniRef50_Q891C1 Cluster: Conserved protein; n=5; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 362
Score = 32.3 bits (70), Expect = 6.6
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 48 EIYNDLMEKDKN--YYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVI 105
+ Y D ME+DK Y+ N L +L +++ E+F + N FD++ V +++
Sbjct: 298 DFYKDSMEQDKENFYFILNEALDILSTCKKLHDDLEEFYINNIDFDIVDNISSGVIQRIL 357
Query: 106 EWFGS 110
+ S
Sbjct: 358 NYKNS 362
>UniRef50_A7AZP9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 470
Score = 32.3 bits (70), Expect = 6.6
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 110 SRRSIYNQPVHVVNID-IQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKC 168
S+ I+ H++N D ++ H E + D VTK +LD +I EL+ ++K
Sbjct: 54 SKHPIFTSVYHLINEDMLKQCHRELDGNKAVGIDKVTKDEYGKNLDRNIKELVQRLKNKS 113
Query: 169 HRP 171
+P
Sbjct: 114 FKP 116
>UniRef50_A0DWS5 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 541
Score = 32.3 bits (70), Expect = 6.6
Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 76 IKPCPE--KFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEA 133
IK C E + Q N+ + E++ +Q+ + F ++ Q + + I I++ +E
Sbjct: 159 IKVCEEMRRLQEDNDDLSTALEVEKQHKEQLRQQFEQQKGQLQQEISELQIKIKNIQDEG 218
Query: 134 TIGAFLISDMVTKMAQSDDLDNDIDELLHEFESK 167
+ + D + + +D++ +HE +SK
Sbjct: 219 QLNTQKLEDRIRNQRDLELNASDLNTKIHELDSK 252
>UniRef50_Q15ZQ7 Cluster: Putative uncharacterized protein
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Putative uncharacterized protein precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 469
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 87 NERFDVIITCEERVYDQ--VIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMV 144
N FD + E ++D +++W + + + + NIDI+ EA++ + S ++
Sbjct: 335 NRDFDFVFLAVEAIHDDKPLLDW-QVLAPLSGRSIPIDNIDIEQFIPEASLDQSVDSVLI 393
Query: 145 TKMAQSDDLDNDIDELL 161
T A+ D N DE L
Sbjct: 394 TLAAEGYDYINSYDEFL 410
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.322 0.139 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,626,868
Number of Sequences: 1657284
Number of extensions: 8899088
Number of successful extensions: 21346
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 21304
Number of HSP's gapped (non-prelim): 42
length of query: 179
length of database: 575,637,011
effective HSP length: 96
effective length of query: 83
effective length of database: 416,537,747
effective search space: 34572633001
effective search space used: 34572633001
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 69 (31.9 bits)
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