Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000925-TA|BGIBMGA000925-PA|IPR006811|Ssu72-like protein
(179 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2027| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 7e-29
SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 31 0.41
SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6) 29 2.9
SB_46055| Best HMM Match : Prothymosin (HMM E-Value=9.4) 28 3.8
SB_24631| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 28 3.8
SB_5466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_2755| Best HMM Match : Vicilin_N (HMM E-Value=7.1) 28 3.8
SB_47064| Best HMM Match : Vicilin_N (HMM E-Value=2.4) 28 5.1
SB_59626| Best HMM Match : Ssu72 (HMM E-Value=8.1) 28 5.1
SB_44346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_54559| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_52952| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 27 6.7
SB_49392| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_48056| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 27 6.7
SB_44140| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 27 6.7
SB_41116| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 27 6.7
SB_40724| Best HMM Match : Vicilin_N (HMM E-Value=0.53) 27 6.7
SB_40603| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_39370| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_38749| Best HMM Match : SASP_gamma (HMM E-Value=4.1) 27 6.7
SB_28488| Best HMM Match : PAX (HMM E-Value=0) 27 6.7
SB_27788| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_19844| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 27 6.7
SB_13286| Best HMM Match : E-MAP-115 (HMM E-Value=4.8) 27 6.7
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 27 6.7
SB_10496| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 27 6.7
SB_9432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_6533| Best HMM Match : Vicilin_N (HMM E-Value=2.8) 27 6.7
SB_1122| Best HMM Match : E-MAP-115 (HMM E-Value=0.8) 27 6.7
SB_819| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_59783| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 27 6.7
SB_59627| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 27 6.7
SB_59182| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_58568| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 27 6.7
SB_55402| Best HMM Match : Vicilin_N (HMM E-Value=1) 27 6.7
SB_50971| Best HMM Match : Vicilin_N (HMM E-Value=4.9) 27 6.7
SB_50838| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 27 6.7
SB_50219| Best HMM Match : DUF1299 (HMM E-Value=9.7) 27 6.7
SB_48283| Best HMM Match : ABC-3 (HMM E-Value=2.4) 27 6.7
SB_43978| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_39343| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_36109| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 27 6.7
SB_34805| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_25966| Best HMM Match : E-MAP-115 (HMM E-Value=4.6) 27 6.7
SB_24905| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_22506| Best HMM Match : Vicilin_N (HMM E-Value=3.8) 27 6.7
SB_20026| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 27 6.7
SB_19668| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_18228| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_13490| Best HMM Match : Vicilin_N (HMM E-Value=0.97) 27 6.7
SB_8900| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_8541| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 27 6.7
SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15) 27 6.7
SB_2780| Best HMM Match : Vicilin_N (HMM E-Value=1) 27 6.7
SB_2471| Best HMM Match : Vicilin_N (HMM E-Value=0.85) 27 6.7
SB_623| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_468| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_35757| Best HMM Match : Extensin_2 (HMM E-Value=4.7) 27 8.8
SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15) 27 8.8
SB_32655| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_2027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 123 bits (297), Expect = 7e-29
Identities = 60/111 (54%), Positives = 80/111 (72%)
Query: 69 MLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQD 128
MLDRNRRIK PE+FQ E FD+IIT EERVYDQVIE + +PVHVVNIDI D
Sbjct: 1 MLDRNRRIKALPERFQEAVEHFDLIITAEERVYDQVIEHLEGLDAQSYKPVHVVNIDILD 60
Query: 129 NHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHRPILNCIMFY 179
NHEEAT+GAFLI ++ + + D++++I++++ +FE K R IL+ + FY
Sbjct: 61 NHEEATLGAFLICEICEAIEKLTDVEDEINDVVAKFEDKYKRNILHSVAFY 111
>SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/58 (34%), Positives = 25/58 (43%)
Query: 8 HAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNG 65
HAF NVK+ G K + S RP C+ G IY ++E KN NG
Sbjct: 421 HAFTSTSTRNVKTPGLKTKTDISSQSFSRPVCFATGDCSAMIYYQVIEWMKNPQDVNG 478
>SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 57 DKNYYTQNGLLHMLDRNRRI--KPCPEKF 83
DKN+Y ++GLL L +R+I K C EKF
Sbjct: 656 DKNFYCEDGLLMTLANHRQIAQKDCSEKF 684
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 122 VNIDIQDN-HEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESK 167
+++D +DN H EA A + ++ +K+AQS+ ND+ +H + K
Sbjct: 150 MSMDEKDNAHNEAKNTAKRVFELESKLAQSEQARNDLQAQVHSLQQK 196
>SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6)
Length = 208
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+EEA +GA
Sbjct: 175 VNIDEQDNNEEAPVGA 190
>SB_46055| Best HMM Match : Prothymosin (HMM E-Value=9.4)
Length = 221
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 96 CEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGA 137
CE+ + + S+R N+ V NID QDN+E+A +GA
Sbjct: 103 CEKGKSHHINKMSRSKRPRQNRQQDV-NIDEQDNNEDAPVGA 143
>SB_24631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 96 CEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGA 137
CE+ + + S+R N+ V NID QDN+E+A +GA
Sbjct: 103 CEKGKSHHINKMSRSKRPRQNRQQDV-NIDEQDNNEDAPVGA 143
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 116 NQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCH 169
N VH +N ++ D++ + + D+ TK+ + D++ ++H+ +K H
Sbjct: 151 NTIVHDLNTEVHDHNTQVHDLKTKVHDLNTKVHDLNTKVRDLNTMVHDLNTKVH 204
>SB_5466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 1/125 (0%)
Query: 44 VLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEERVYDQ 103
+ Y D+M + K NG +D ++ E E+ V++ C R Y
Sbjct: 278 ISYQWDVQDVMIQVKELLQANGYHVWMDIDQMEGSTLEAMANAVEKSAVVLMCASRKYKD 337
Query: 104 VIEWFGSRRSIYNQPVHVVNIDIQDNHE-EATIGAFLISDMVTKMAQSDDLDNDIDELLH 162
+ Y Q +V + +++ ++ + +G + S + A +++ ++L+
Sbjct: 338 SVNCRSEAEYAYTQKKPIVPLMMENGYKPDGWLGMIMGSKLYFNFAPGNNIRETAEKLMR 397
Query: 163 EFESK 167
E K
Sbjct: 398 EIGEK 402
>SB_2755| Best HMM Match : Vicilin_N (HMM E-Value=7.1)
Length = 166
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 96 CEERVYDQVIEWFGSRRSIYNQPVHVVNIDIQDNHEEATIGA 137
CE+ + + S+R N+ V NID QDN+E+A +GA
Sbjct: 103 CEKGKSHHINKMSRSKRPRQNRQQDV-NIDEQDNNEDAPVGA 143
>SB_47064| Best HMM Match : Vicilin_N (HMM E-Value=2.4)
Length = 175
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAAVGA 151
>SB_59626| Best HMM Match : Ssu72 (HMM E-Value=8.1)
Length = 144
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 122 VNIDIQDNHEEATIGA----FLISDMVTK-MAQSDDLDNDIDELL 161
VNID QDN+E+A +GA F + +T+ +A++ D N D ++
Sbjct: 33 VNIDEQDNNEDAPVGAENAIFESAQAITENVAKAKDGINSTDSIV 77
>SB_44346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 29
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QD HE+A +GA
Sbjct: 11 VNIDKQDKHEDAPVGA 26
>SB_54559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDKQDNNEDAPVGA 43
>SB_52952| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_49392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDEQDNNEDAPVGA 43
>SB_48056| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_44140| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_41116| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_40724| Best HMM Match : Vicilin_N (HMM E-Value=0.53)
Length = 174
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_40603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 13 VNIDKQDNNEDAPVGA 28
>SB_39370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 15 VNIDEQDNNEDAPVGA 30
>SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 112 RSIYNQPVHVVNI-DIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHR 170
RS + P + NI +++ E + + +D T + DD + D D + E CH+
Sbjct: 488 RSRFTGPFSISNILELESPEEAGKVSSDDYTDQETFEEKGDDEEFDNDPRPEDRELPCHK 547
Query: 171 P 171
P
Sbjct: 548 P 548
>SB_38749| Best HMM Match : SASP_gamma (HMM E-Value=4.1)
Length = 155
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 116 VNIDKQDNNEDAPVGA 131
>SB_28488| Best HMM Match : PAX (HMM E-Value=0)
Length = 551
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 112 RSIYNQPVHVVNI-DIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFESKCHR 170
RS + P + NI +++ E + + +D T + DD + D D + E CH+
Sbjct: 446 RSRFTGPFSISNILELESPEEAGKVSSDDYTDQETFEEKGDDEEFDNDPRPEDRELPCHK 505
Query: 171 P 171
P
Sbjct: 506 P 506
>SB_27788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDEQDNNEDAPVGA 43
>SB_19844| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 174
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_13286| Best HMM Match : E-MAP-115 (HMM E-Value=4.8)
Length = 176
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 137 VNIDEQDNNEDAPVGA 152
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 121 VVNIDIQDNHEEATIGAFLISDMVT--KMAQSDDLDNDIDELLHEFESKCHR 170
V I+ +D HEE +G D+VT K A+ + + + L E E++ R
Sbjct: 104 VAPIEDKDRHEEVMLGRTKCYDLVTKAKKAKEQKVQRNTEIFLKELETEKER 155
>SB_10496| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_9432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_6533| Best HMM Match : Vicilin_N (HMM E-Value=2.8)
Length = 154
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_1122| Best HMM Match : E-MAP-115 (HMM E-Value=0.8)
Length = 976
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 179 VNIDEQDNNEDAPVGA 194
>SB_819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_59783| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_59627| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_59182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 72 VNIDEQDNNEDAPVGA 87
>SB_58568| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 185
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_55402| Best HMM Match : Vicilin_N (HMM E-Value=1)
Length = 174
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_50971| Best HMM Match : Vicilin_N (HMM E-Value=4.9)
Length = 318
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 72 VNIDEQDNNEDAPVGA 87
>SB_50838| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 174
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_50219| Best HMM Match : DUF1299 (HMM E-Value=9.7)
Length = 80
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDEQDNNEDAPVGA 43
>SB_48283| Best HMM Match : ABC-3 (HMM E-Value=2.4)
Length = 745
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 68 HMLDRNRRIKPCPEKFQVCNERFDVIIT 95
+ LDR R PCP+K C + + ++++
Sbjct: 52 YRLDRFGRCSPCPDKSLKCEDDYAILVS 79
>SB_43978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 72 VNIDEQDNNEDAPVGA 87
>SB_39343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDEQDNNEDAPVGA 43
>SB_36109| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 174
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_34805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDKQDNNEDAPVGA 43
>SB_25966| Best HMM Match : E-MAP-115 (HMM E-Value=4.6)
Length = 154
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_24905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 70 VNIDEQDNNEDAPVGA 85
>SB_22506| Best HMM Match : Vicilin_N (HMM E-Value=3.8)
Length = 174
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
>SB_20026| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 167
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 129 VNIDEQDNNEDAPVGA 144
>SB_19668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 123 VNIDEQDNNEDAPVGA 138
>SB_18228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDEQDNNEDAPVGA 43
>SB_13490| Best HMM Match : Vicilin_N (HMM E-Value=0.97)
Length = 141
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 123 VNIDEQDNNEDAPVGA 138
>SB_8900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 28 VNIDEQDNNEDAPVGA 43
>SB_8541| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 165
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 126 VNIDEQDNNEDAPVGA 141
>SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15)
Length = 334
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 136 VNIDEQDNNEDAPVGA 151
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 278 VNIDEQDNNEDAPVGA 293
>SB_2780| Best HMM Match : Vicilin_N (HMM E-Value=1)
Length = 228
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 190 VNIDEQDNNEDAPVGA 205
>SB_2471| Best HMM Match : Vicilin_N (HMM E-Value=0.85)
Length = 160
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 123 VNIDEQDNNEDAPVGA 138
>SB_623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 60 VNIDKQDNNEDAPVGA 75
>SB_468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 122 VNIDIQDNHEEATIGA 137
VNID QDN+E+A +GA
Sbjct: 23 VNIDEQDNNEDAPVGA 38
>SB_35757| Best HMM Match : Extensin_2 (HMM E-Value=4.7)
Length = 211
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 79 CPEKFQVCNERFDVIITCEERVYDQVIEWFGSRRSIYNQPVHVVNIDI 126
C C + + + + VY+ I + S S+YN P+ V N+ I
Sbjct: 29 CLHLINQCLQLTNSVYNLQISVYNSPISVYISSISVYNSPISVYNLPI 76
>SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15)
Length = 715
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/63 (23%), Positives = 24/63 (38%)
Query: 40 YEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRRIKPCPEKFQVCNERFDVIITCEER 99
+ FG+L+D ND D Y + LL + + C + +F +
Sbjct: 344 HNFGMLHDGDENDCKRNDNTPYLMSALLQTTGKQQYWSECSRGYLRRFLKFRATVALPGT 403
Query: 100 VYD 102
VYD
Sbjct: 404 VYD 406
>SB_32655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 106 EWFGSRRSIYNQPVHVVNIDIQDNHEEATIGAFLISDMVTKMAQSDDL-----DNDIDEL 160
E+F ++ + + +N ++ N+ E T+ AFLI T D L + E
Sbjct: 290 EYFNKGADVFLESLARLNYQLKTNNSETTVVAFLIFPTKTNNFNVDSLRGQAVTKQLKET 349
Query: 161 LHEFESKCHRPIL-NCI 176
++E + K + I +C+
Sbjct: 350 VNEIQDKIGKRIYESCV 366
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.139 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,486,055
Number of Sequences: 59808
Number of extensions: 280767
Number of successful extensions: 739
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 652
Number of HSP's gapped (non-prelim): 93
length of query: 179
length of database: 16,821,457
effective HSP length: 78
effective length of query: 101
effective length of database: 12,156,433
effective search space: 1227799733
effective search space used: 1227799733
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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