Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000923-TA|BGIBMGA000923-PA|IPR004205|UcrQ
(82 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.07 |qcr8||ubiquinol-cytochrome-c reductase complex subu... 42 1e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 28 0.19
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 27 0.43
SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein L21|Sch... 26 0.57
SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein L21|Sc... 26 0.57
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 25 1.00
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 25 1.7
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 25 1.7
SPAC1687.12c |coq4||ubiquinone biosynthesis protein Coq4|Schizos... 24 3.0
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 23 4.0
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 23 5.3
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 23 7.0
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 22 9.3
SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF... 22 9.3
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 22 9.3
>SPAC1782.07 |qcr8||ubiquinol-cytochrome-c reductase complex
subunit 7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 92
Score = 41.5 bits (93), Expect = 1e-05
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 10 KIRGLVTYKISAHEQRAYAGAISNGIPNIFRRFRESVFKVVPPFIIGYLIY 60
K +G++TY +S +QR AG N+FRR V PF I Y IY
Sbjct: 21 KQKGIITYSLSPFQQRPMAGFFKTSTQNMFRRVMTEGLYVAIPFGIAYYIY 71
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 0.19
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 32 SNGIPNIFRRFRESVFKVVPPFIIGYLIYEGVEREHHRL 70
+ GI FR + ++ K++P I + YE V + H L
Sbjct: 279 TEGINGFFRGYSSNMLKIIPVMSITWYTYETVSKMLHDL 317
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 26.6 bits (56), Expect = 0.43
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 27 YAGAISNGIPNIFRRFRESVFKVVPPFIIGYLIYEGVER 65
Y + G +++ ++ KV P I YL+YE ++
Sbjct: 383 YKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKK 421
>SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 160
Score = 26.2 bits (55), Expect = 0.57
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 3 KHFGELAKIRGLVTYKISAHEQRAYAGAISNGIPNIFRRFRESVFKVVPPFIIGYLIYEG 62
+ G++ L TYK+ GA+ G+P+ + + V V +G LIY+
Sbjct: 20 REHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKV 79
Query: 63 V 63
V
Sbjct: 80 V 80
>SPBC365.03c |rpl2101|rpl21, rpl21-1|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 26.2 bits (55), Expect = 0.57
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 3 KHFGELAKIRGLVTYKISAHEQRAYAGAISNGIPNIFRRFRESVFKVVPPFIIGYLIYEG 62
+ G++ L TYK+ GA+ G+P+ + + V V +G LIY+
Sbjct: 20 REHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKV 79
Query: 63 V 63
V
Sbjct: 80 V 80
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 1.00
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 34 GIPNIFRRFRESVFKVVPPFIIGYLIYEGVEREHHRLSRKN 74
GI ++ F + +VVP I +L+YE V S K+
Sbjct: 236 GILGFYKGFLPHLLRVVPQTCITFLVYEQVGMHFKTQSSKS 276
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 24.6 bits (51), Expect = 1.7
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 22 HEQRAYAGAISNGIPNIFRRFRESVFKVVPPFIIGYLIYEGVEREHHRLSRKNPADFE 79
H R Y SNG+ I F+ +FK I L + + RE L DF+
Sbjct: 345 HSTRTYVEQFSNGVTIISYNFKPELFKNAAVTSINEL-FSQITREASLLYCLPSTDFQ 401
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 24.6 bits (51), Expect = 1.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 5 FGELAKIRGLVTYKISAHEQRAYAGAISNGIPNIF 39
FG++ ++R + +K +AH A IS G+ N F
Sbjct: 41 FGKVVQLRSFIPFKNAAHALE-NANDISEGVLNDF 74
>SPAC1687.12c |coq4||ubiquinone biosynthesis protein
Coq4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 23.8 bits (49), Expect = 3.0
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 48 KVVPPFIIGYLIYEGVEREHHRLSRKNPADFEND 81
+ +PP +G + + +++EH ++P F +D
Sbjct: 127 RTLPPNTLGKIYVDWIDKEHVGPDTRSPTRFVDD 160
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 23.4 bits (48), Expect = 4.0
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 34 GIPNIFRRFRESVFKVVPPFIIGYLIYEGVEREHHRLSRKNPA 76
GIP+ F+ R + +P + + YE + R+S+ + A
Sbjct: 261 GIPSFFKGIRPRMVVAMPATAVSWAAYEAGKEILIRVSKTSQA 303
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 23.0 bits (47), Expect = 5.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 22 HEQRAYAGAISNGIPNIFRRFRESVFKVVP 51
HE A A ++GIP F +++V + +P
Sbjct: 340 HEATTSARASASGIPGAFEEVQQTVQEDLP 369
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 32 SNGIPNIFRRFRESVFKVVPPFIIGYLIYEGVER 65
S G+ +FR F +F + ++ YEG+ R
Sbjct: 294 SEGLLGLFRGFGPRIFWTSSQSSLMFVFYEGIIR 327
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 22.2 bits (45), Expect = 9.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 54 IIGYLIYEGVEREHHRLSRKNP 75
I+ ++ G R +HRL+ K P
Sbjct: 1108 ILPIAVFMGRSRPYHRLAHKRP 1129
>SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF4E
4F complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 22.2 bits (45), Expect = 9.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1 MGKHFGELAKIRGLVTYKISAHEQRAYAGAI 31
+G F E+ I T + SAHE + AG++
Sbjct: 205 IGLRFKEVLGISDKETIEYSAHEDSSKAGSM 235
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 22.2 bits (45), Expect = 9.3
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 2 GKHFGELAKIRGLVTYKISAHEQRAYAGAISNGIPNIFRR 41
GKHF ELA G ++ +Q+ + +G + +R
Sbjct: 291 GKHFQELANDYGDNLVVVNLLDQKGREAPLRSGFEKLCKR 330
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.142 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,632
Number of Sequences: 5004
Number of extensions: 13274
Number of successful extensions: 37
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 16
length of query: 82
length of database: 2,362,478
effective HSP length: 60
effective length of query: 22
effective length of database: 2,062,238
effective search space: 45369236
effective search space used: 45369236
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)
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