GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000923-TA|BGIBMGA000923-PA|IPR004205|UcrQ
         (82 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   1.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   4.2  
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    21   4.2  

>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
          protein.
          Length = 298

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 61 EGVEREHHRLSRKNP 75
          E + +E HRL+RK P
Sbjct: 60 EQLNKEQHRLARKQP 74


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 8   LAKIRGLVTYKISAHEQRAYAGAISNG 34
           +AK+  LV YK   H  R+Y     +G
Sbjct: 626 IAKVFELVIYKNLLHACRSYLSPYQHG 652


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
          glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 35 IPNIFRRFRESVFKVVPPFIIGYL 58
          +  + R  R  +  ++P FIIG+L
Sbjct: 63 VERVRRAHRNDMENILPYFIIGFL 86


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.142    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,339
Number of Sequences: 2123
Number of extensions: 2601
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 82
length of database: 516,269
effective HSP length: 53
effective length of query: 29
effective length of database: 403,750
effective search space: 11708750
effective search space used: 11708750
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)