Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000923-TA|BGIBMGA000923-PA|IPR004205|UcrQ
(82 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g61810.1 68418.m07756 mitochondrial substrate carrier family ... 29 0.29
At3g52940.1 68416.m05835 C-14 sterol reductase / delta(14)-stero... 28 0.89
At2g32295.1 68415.m03948 EXS family protein / ERD1/XPR1/SYG1 fam... 28 0.89
At2g35070.1 68415.m04302 expressed protein 27 1.2
At5g07320.1 68418.m00836 mitochondrial substrate carrier family ... 27 2.1
At2g35090.1 68415.m04305 hypothetical protein 27 2.1
At1g05840.1 68414.m00611 aspartyl protease family protein contai... 27 2.1
At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to hi... 26 3.6
At5g35730.1 68418.m04274 EXS family protein / ERD1/XPR1/SYG1 fam... 25 4.8
At1g78180.1 68414.m09110 mitochondrial substrate carrier family ... 25 4.8
At1g69170.2 68414.m07914 squamosa promoter-binding protein-like ... 25 4.8
At1g69170.1 68414.m07913 squamosa promoter-binding protein-like ... 25 4.8
At5g64970.1 68418.m08172 mitochondrial substrate carrier family ... 25 6.3
At4g10630.1 68417.m01737 glutaredoxin family protein contains Pf... 25 8.3
At2g37890.1 68415.m04651 mitochondrial substrate carrier family ... 25 8.3
At1g25380.1 68414.m03150 mitochondrial substrate carrier family ... 25 8.3
>At5g61810.1 68418.m07756 mitochondrial substrate carrier family
protein similar to peroxisomal Ca-dependent solute
carrier, Oryctolagus cuniculus,GI:2352427; contains
INTERPRO:IPR001993 Mitochondrial substrate carrier
family, INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 478
Score = 29.5 bits (63), Expect = 0.29
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 34 GIPNIFRRFRESVFKVVPPFIIGYLIYEGVER 65
G+ +R + FKV+P I YL+YE +++
Sbjct: 442 GLKGFYRGIFPNFFKVIPSASISYLVYEAMKK 473
>At3g52940.1 68416.m05835 C-14 sterol reductase / delta(14)-sterol
reductase / FACKEL (FK) identical to gi:9082182
Length = 369
Score = 27.9 bits (59), Expect = 0.89
Identities = 9/23 (39%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 53 FIIGYLIYEGVEREHHRLSRKNP 75
F+IGY+++ G ++ H + +KNP
Sbjct: 251 FLIGYMVFRGANKQKH-IFKKNP 272
>At2g32295.1 68415.m03948 EXS family protein / ERD1/XPR1/SYG1 family
protein low similarity to xenotropic and polytropic
murine leukemia virus receptor [Mustela vison]
GI:6093316; contains Pfam profile PF03124: EXS family
Length = 424
Score = 27.9 bits (59), Expect = 0.89
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 11 IRGLVTYKISAHEQRAYAGAISNGIPNIFRRFRESVFKVVPPFIIGYLIYEGVEREHHRL 70
+R TYK+SAH + Y I+RRF+ + F++ ++ + H
Sbjct: 344 LRWTWTYKLSAHLRNNYITVFIITALEIYRRFQWAFFRIEN-------VWYKINNPKHTA 396
Query: 71 SRKNPADFEND 81
+ NP ++D
Sbjct: 397 HQSNPLSLQHD 407
>At2g35070.1 68415.m04302 expressed protein
Length = 158
Score = 27.5 bits (58), Expect = 1.2
Identities = 10/47 (21%), Positives = 23/47 (48%)
Query: 2 GKHFGELAKIRGLVTYKISAHEQRAYAGAISNGIPNIFRRFRESVFK 48
G H +L ++ L + + + A GAI++G ++ + + + K
Sbjct: 25 GNHVDKLGMVKALEAINVPSTQAEALTGAITSGFESVMGKVKADIAK 71
>At5g07320.1 68418.m00836 mitochondrial substrate carrier family
protein similar to peroxisomal Ca-dependent solute
carrier [Oryctolagus cuniculus] GI:2352427
(mitochondrial carrier superfamily); contains
INTERPRO:IPR001993 Mitochondrial substrate carrier
family, INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 479
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 34 GIPNIFRRFRESVFKVVPPFIIGYLIYEGVER 65
G+ +R ++ KVVP I Y++YE +++
Sbjct: 443 GLRGFYRGLLPNLLKVVPAASITYIVYEAMKK 474
>At2g35090.1 68415.m04305 hypothetical protein
Length = 124
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 2 GKHFGELAKIRGLVTYKISAHEQRAYAGAISNGIPNIFRRFRES 45
G H +L ++ L + + + A GAI++G+ ++ + +S
Sbjct: 25 GNHVDKLGMVKALEAINVPSTQAEALTGAITSGLESVVEKEYQS 68
>At1g05840.1 68414.m00611 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease
Length = 485
Score = 26.6 bits (56), Expect = 2.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 27 YAGAISNGIPNIFRRFRESVFKVVPP 52
Y+G + G PN+ F SVF V P
Sbjct: 356 YSGRVDEGFPNVTFHFENSVFLRVYP 381
>At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to
histidine kinase AHK2 [Arabidopsis thaliana]
gi|13537196|dbj|BAB40774
Length = 1176
Score = 25.8 bits (54), Expect = 3.6
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 45 SVFKVVPPFIIGYLIYEGVER 65
S+ +V F++GY++YE + R
Sbjct: 543 SILVLVITFLVGYILYEAINR 563
>At5g35730.1 68418.m04274 EXS family protein / ERD1/XPR1/SYG1 family
protein low similarity to xenotropic and polytropic
murine leukemia virus receptor [Mus spretus] GI:6093318;
contains Pfam profile PF03124: EXS family
Length = 457
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 16 TYKISAHEQRAYAGAISNGIPNIFRRFRESVFKV 49
TYK+SAH + Y + + RRF+ F+V
Sbjct: 392 TYKLSAHLRHNYITVFTMTAMEMLRRFQWVFFRV 425
>At1g78180.1 68414.m09110 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 34 GIPNIFRRFRESVFKVVPPFIIGYLIYE 61
GIP ++ S+ +V+P I Y +YE
Sbjct: 306 GIPALYAGLLPSLLQVLPSASISYFVYE 333
>At1g69170.2 68414.m07914 squamosa promoter-binding protein-like 6
(SPL6) identical to squamosa promoter binding
protein-like 6 [Arabidopsis thaliana] GI:5931683;
contains Pfam profile PF03110: SBP domain
Length = 405
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 41 RFRESVFKVVPPFIIGYLIYEGVEREHHRLSR 72
+F E+ V+P G L+Y ++ + HR SR
Sbjct: 221 KFLENSSLVLPESFPGSLLYRVIDEDDHRTSR 252
>At1g69170.1 68414.m07913 squamosa promoter-binding protein-like 6
(SPL6) identical to squamosa promoter binding
protein-like 6 [Arabidopsis thaliana] GI:5931683;
contains Pfam profile PF03110: SBP domain
Length = 405
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 41 RFRESVFKVVPPFIIGYLIYEGVEREHHRLSR 72
+F E+ V+P G L+Y ++ + HR SR
Sbjct: 221 KFLENSSLVLPESFPGSLLYRVIDEDDHRTSR 252
>At5g64970.1 68418.m08172 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 428
Score = 25.0 bits (52), Expect = 6.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 34 GIPNIFRRFRESVFKVVPPFIIGYLIYE 61
G+P ++ S+ +V+P I Y +YE
Sbjct: 389 GVPALYAGLIPSLLQVLPSAAISYFVYE 416
>At4g10630.1 68417.m01737 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 334
Score = 24.6 bits (51), Expect = 8.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 47 FKVVPPFIIGYLIYEGVEREHHRLSRKNPADFENDQ 82
F +P + Y ++ G +E+ SR+NP ND+
Sbjct: 97 FTPLPKTPVKYKVFGGENKENSDPSRRNPRKNLNDE 132
>At2g37890.1 68415.m04651 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 337
Score = 24.6 bits (51), Expect = 8.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 32 SNGIPNIFRRFRESVFKVVPPFIIGYLIYEGVER 65
S G I+R +KVVP I ++ Y+ + R
Sbjct: 297 SEGFKGIYRGILPEYYKVVPGVGIVFMTYDALRR 330
>At1g25380.1 68414.m03150 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 363
Score = 24.6 bits (51), Expect = 8.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 32 SNGIPNIFRRFRESVFKVVPPFIIGYLIYE 61
S GIP ++R ++ + P +I + YE
Sbjct: 271 SEGIPGLYRGCATNLLRTTPSAVITFTTYE 300
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.142 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,969,460
Number of Sequences: 28952
Number of extensions: 65836
Number of successful extensions: 119
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 104
Number of HSP's gapped (non-prelim): 16
length of query: 82
length of database: 12,070,560
effective HSP length: 61
effective length of query: 21
effective length of database: 10,304,488
effective search space: 216394248
effective search space used: 216394248
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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