GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000922-TA|BGIBMGA000922-PA|undefined
         (338 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87453-1|BAA13394.1|  415|Homo sapiens KIAA0264 protein.               52   2e-06
BC064902-1|AAH64902.1|  414|Homo sapiens mitochondrial ribosomal...    52   2e-06
U75296-1|AAC50966.1|  485|Homo sapiens fatty aldehyde dehydrogen...    31   4.4  
U75295-1|AAC50965.1|  508|Homo sapiens fatty aldehyde dehydrogen...    31   4.4  
U46689-1|AAC51121.1|  485|Homo sapiens aldehyde dehydrogenase pr...    31   4.4  
L47162-1|AAB01003.1|  485|Homo sapiens fatty aldehyde dehydrogen...    31   4.4  
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       31   4.4  
CR457422-1|CAG33703.1|  485|Homo sapiens ALDH3A2 protein.              31   4.4  
BC002430-1|AAH02430.1|  508|Homo sapiens aldehyde dehydrogenase ...    31   4.4  
AF273044-1|AAG34904.1|  761|Homo sapiens CTCL tumor antigen se2-...    31   4.4  
AB208894-1|BAD92131.1|  461|Homo sapiens aldehyde dehydrogenase ...    31   4.4  
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.             31   4.4  
BC013101-1|AAH13101.1|  428|Homo sapiens leucine rich repeat con...    31   5.8  
AK075201-1|BAC11466.1|  428|Homo sapiens  2.4.1.143).  protein.        31   5.8  
AK074521-1|BAC11038.1|  449|Homo sapiens protein ( Homo sapiens ...    31   5.8  

>D87453-1|BAA13394.1|  415|Homo sapiens KIAA0264 protein.
          Length = 415

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 20/66 (30%), Positives = 40/66 (60%)

Query: 5   TSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIAALI 64
           T H  +R  +K+D  D+ +  L + + YG+F D+++ N+L++  + K+NY  A  +   +
Sbjct: 109 TIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEV 168

Query: 65  MLQEEY 70
           M+QE +
Sbjct: 169 MMQEAF 174


>BC064902-1|AAH64902.1|  414|Homo sapiens mitochondrial ribosomal
           protein S27 protein.
          Length = 414

 Score = 52.4 bits (120), Expect = 2e-06
 Identities = 20/66 (30%), Positives = 40/66 (60%)

Query: 5   TSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIAALI 64
           T H  +R  +K+D  D+ +  L + + YG+F D+++ N+L++  + K+NY  A  +   +
Sbjct: 108 TIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEV 167

Query: 65  MLQEEY 70
           M+QE +
Sbjct: 168 MMQEAF 173


>U75296-1|AAC50966.1|  485|Homo sapiens fatty aldehyde dehydrogenase
           protein.
          Length = 485

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 299 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 334
           +ID  +E+  + V     KK VLT +DE YI P+ L
Sbjct: 67  EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102


>U75295-1|AAC50965.1|  508|Homo sapiens fatty aldehyde dehydrogenase
           protein.
          Length = 508

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 299 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 334
           +ID  +E+  + V     KK VLT +DE YI P+ L
Sbjct: 67  EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102


>U46689-1|AAC51121.1|  485|Homo sapiens aldehyde dehydrogenase
           protein.
          Length = 485

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 299 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 334
           +ID  +E+  + V     KK VLT +DE YI P+ L
Sbjct: 67  EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102


>L47162-1|AAB01003.1|  485|Homo sapiens fatty aldehyde dehydrogenase
           protein.
          Length = 485

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 299 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 334
           +ID  +E+  + V     KK VLT +DE YI P+ L
Sbjct: 67  EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102


>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)

Query: 209  SLLAKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQSHRL 268
            +LL   E + T  + + SLTDN+ +  N+ Q+K  A  K   IL EK    ++++++  L
Sbjct: 1797 NLLKLKEALKTSKNRENSLTDNLNDLNNELQKKQKAYNK---ILREKE---EIDQENDEL 1850

Query: 269  DR-VKRVXXXXXXXXXXXXXXXXXWFFENE-EKIDLQIEDKEKLVDKTQTKKK 319
             R +KR+                    + + +K++ Q+E K + VD    K+K
Sbjct: 1851 KRQIKRLTSGLQGKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLKPMKEK 1903


>CR457422-1|CAG33703.1|  485|Homo sapiens ALDH3A2 protein.
          Length = 485

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 299 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 334
           +ID  +E+  + V     KK VLT +DE YI P+ L
Sbjct: 67  EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102


>BC002430-1|AAH02430.1|  508|Homo sapiens aldehyde dehydrogenase 3
           family, member A2 protein.
          Length = 508

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 299 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 334
           +ID  +E+  + V     KK VLT +DE YI P+ L
Sbjct: 67  EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 102


>AF273044-1|AAG34904.1|  761|Homo sapiens CTCL tumor antigen se2-2
           protein.
          Length = 761

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)

Query: 209 SLLAKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQSHRL 268
           +LL   E + T  + + SLTDN+ +  N+ Q+K  A  K   IL EK    ++++++  L
Sbjct: 172 NLLKLKEALKTSKNRENSLTDNLNDLNNELQKKQKAYNK---ILREKE---EIDQENDEL 225

Query: 269 DR-VKRVXXXXXXXXXXXXXXXXXWFFENE-EKIDLQIEDKEKLVDKTQTKKK 319
            R +KR+                    + + +K++ Q+E K + VD    K+K
Sbjct: 226 KRQIKRLTSGLQGKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLKPMKEK 278


>AB208894-1|BAD92131.1|  461|Homo sapiens aldehyde dehydrogenase 3A2
           variant protein.
          Length = 461

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 299 KIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEIL 334
           +ID  +E+  + V     KK VLT +DE YI P+ L
Sbjct: 43  EIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPL 78


>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
          Length = 1540

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)

Query: 209 SLLAKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQSHRL 268
           +LL   E + T  + + SLTDN+ +  N+ Q+K  A  K   IL EK    ++++++  L
Sbjct: 858 NLLKLKEALKTSKNRENSLTDNLNDLNNELQKKQKAYNK---ILREKE---EIDQENDEL 911

Query: 269 DR-VKRVXXXXXXXXXXXXXXXXXWFFENE-EKIDLQIEDKEKLVDKTQTKKK 319
            R +KR+                    + + +K++ Q+E K + VD    K+K
Sbjct: 912 KRQIKRLTSGLQGKPLTDNKQSLIEELQRKVKKLENQLEGKVEEVDLKPMKEK 964


>BC013101-1|AAH13101.1|  428|Homo sapiens leucine rich repeat
           containing 42 protein.
          Length = 428

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 5   TSHATVRHSIK--FDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQ-AADIA 61
           T    +R+S K  F  V   I    D ++  +   +  A  L +    ++ +T+  A + 
Sbjct: 77  TREGNLRYSAKSLFSLVLGFISDNVDHIDSLIGFPEQIAEKLFSAAEARQKFTEPGAGLR 136

Query: 62  ALIMLQEEYNNDILCSLCQYSSYMFIKNYVE 92
           AL    E Y + +LCSLC  + Y+ I   +E
Sbjct: 137 ALQKFTEAYGSLVLCSLCLRNRYLVISEKLE 167


>AK075201-1|BAC11466.1|  428|Homo sapiens  2.4.1.143).  protein.
          Length = 428

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 5   TSHATVRHSIK--FDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQ-AADIA 61
           T    +R+S K  F  V   I    D ++  +   +  A  L +    ++ +T+  A + 
Sbjct: 77  TREGNLRYSAKSLFSLVLGFISDNVDHIDSLIGFPEQIAEKLFSAAEARQKFTEPGAGLR 136

Query: 62  ALIMLQEEYNNDILCSLCQYSSYMFIKNYVE 92
           AL    E Y + +LCSLC  + Y+ I   +E
Sbjct: 137 ALQKFTEAYGSLVLCSLCLRNRYLVISEKLE 167


>AK074521-1|BAC11038.1|  449|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90040 fis, clone HEMBA1002164. ).
          Length = 449

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 5   TSHATVRHSIK--FDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQ-AADIA 61
           T    +R+S K  F  V   I    D ++  +   +  A  L +    ++ +T+  A + 
Sbjct: 77  TREGNLRYSAKSLFSLVLGFISDNVDHIDSLIGFPEQIAEKLFSAAEARQKFTEPGAGLR 136

Query: 62  ALIMLQEEYNNDILCSLCQYSSYMFIKNYVE 92
           AL    E Y + +LCSLC  + Y+ I   +E
Sbjct: 137 ALQKFTEAYGSLVLCSLCLRNRYLVISEKLE 167


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.135    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,565,857
Number of Sequences: 224733
Number of extensions: 1341530
Number of successful extensions: 3606
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3592
Number of HSP's gapped (non-prelim): 20
length of query: 338
length of database: 73,234,838
effective HSP length: 90
effective length of query: 248
effective length of database: 53,008,868
effective search space: 13146199264
effective search space used: 13146199264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)