Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000922-TA|BGIBMGA000922-PA|undefined
(338 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical p... 79 3e-15
Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical pr... 79 3e-15
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 30 2.0
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 30 2.0
Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical pr... 29 3.6
AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans alpha-1->3-fu... 29 3.6
AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl trans... 29 3.6
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 6.2
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 6.2
M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein. 28 8.2
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 79.4 bits (187), Expect = 3e-15
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 10/177 (5%)
Query: 2 LESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIA 61
LES+ +A VR +K+ + +I + DP+NYG+FL+ + A I+++ L N AA I
Sbjct: 105 LESSEYAIVRLLLKYQ-PETIITLANDPINYGVFLNQHLACIVIDHFLKTSNIQAAARIV 163
Query: 62 ALIMLQEEYNNDILCSLCQYSSYMFIKNYVEPEPAVMXXX------XXXXXXXXXRVKFL 115
++ QEE +N++L L Y +++ VE + + + +L
Sbjct: 164 TWMIQQEELDNELLNILGLYVCAKWVELPVEQQTLDLGGADDEEEDINDDDIRTFKFPYL 223
Query: 116 RNPYFDDHFDIKDRLKLAGKTLAWISEKT---SNTLNNNLQLIGWLIYKKYDQLLAT 169
+N FD+HFD+ + L GK+L W+S T + L ++L +G ++++K + +T
Sbjct: 224 KNDSFDEHFDLSNPHHLIGKSLQWLSRDTKFIDSQLKSSLNALGAVLFEKLAEANST 280
>Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 79.4 bits (187), Expect = 3e-15
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 10/177 (5%)
Query: 2 LESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIA 61
LES+ +A VR +K+ + +I + DP+NYG+FL+ + A I+++ L N AA I
Sbjct: 105 LESSEYAIVRLLLKYQ-PETIITLANDPINYGVFLNQHLACIVIDHFLKTSNIQAAARIV 163
Query: 62 ALIMLQEEYNNDILCSLCQYSSYMFIKNYVEPEPAVMXXX------XXXXXXXXXRVKFL 115
++ QEE +N++L L Y +++ VE + + + +L
Sbjct: 164 TWMIQQEELDNELLNILGLYVCAKWVELPVEQQTLDLGGADDEEEDINDDDIRTFKFPYL 223
Query: 116 RNPYFDDHFDIKDRLKLAGKTLAWISEKT---SNTLNNNLQLIGWLIYKKYDQLLAT 169
+N FD+HFD+ + L GK+L W+S T + L ++L +G ++++K + +T
Sbjct: 224 KNDSFDEHFDLSNPHHLIGKSLQWLSRDTKFIDSQLKSSLNALGAVLFEKLAEANST 280
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 3 ESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNEL 48
ES S V S+ +YVDELIQ L L Y + DD + + N++
Sbjct: 303 ESLSRKNV-DSVSREYVDELIQSLSIQLKYLTYHDDCKCDDIWNQM 347
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 116 RNPYFDDHFDIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYKKYDQLLATSEEL 173
RN Y DD + +R+K+ + L + K S T + +Q + L+ +K +QL +E+
Sbjct: 85 RNEYLDDLEEANERIKILDEELDKLEAKISKTEESLVQSVSMLL-EKDEQLKTIRKEM 141
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 116 RNPYFDDHFDIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYKKYDQLLATSEEL 173
RN Y DD + +R+K+ + L + K S T + +Q + L+ +K +QL +E+
Sbjct: 85 RNEYLDDLEEANERIKILDEKLDKLEAKISKTEESLVQSVSMLL-EKDEQLKTIRKEM 141
>Z46794-3|CAA86783.1| 429|Caenorhabditis elegans Hypothetical
protein R06F6.4 protein.
Length = 429
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 146 NTLNNNLQLIGWLIYKKYDQLLATSEELCTNTKFRIYNEVIDL 188
N N +L GW + K + +L T+EE + R+ N+ I L
Sbjct: 264 NKENGQCELCGWTMSKDHFELCRTAEEAGIAARSRLANDAIPL 306
>AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans
alpha-1->3-fucosyltransferase homologueprotein.
Length = 382
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 125 DIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYK 161
D+ L KT W+ NT NN +QLIG +I K
Sbjct: 174 DVNSIWSLKTKTATWLGSNC-NTPNNRIQLIGKMIQK 209
>AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl
transferase protein 4 protein.
Length = 382
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 125 DIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYK 161
D+ L KT W+ NT NN +QLIG +I K
Sbjct: 174 DVNSIWSLKTKTATWLGSNC-NTPNNRIQLIGKMIQK 209
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 212 AKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQ 264
AK++ + + + ++ + N + +T+EK + E+F L EK R+++ + +
Sbjct: 219 AKVKELEYEIRVAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNK 271
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 212 AKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQ 264
AK++ + + + ++ + N + +T+EK + E+F L EK R+++ + +
Sbjct: 219 AKVKELEYEIRVAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNK 271
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 212 AKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQ 264
AK++ + + + ++ + N + +T+EK + E+F L EK R+++ + +
Sbjct: 219 AKVKELEYEIRVAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNK 271
>M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein.
Length = 272
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/63 (23%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 212 AKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQL--KLEEQSHRLD 269
+K E+ K L+ + + +E A++ + +V AQK L L+++ +QL +++++ R +
Sbjct: 123 SKAELARAKKKLETDI-NQLEIALDHANKANVDAQKNLKKLFDQVKQLQGQVDDEQRRRE 181
Query: 270 RVK 272
++
Sbjct: 182 EIR 184
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 222 SLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQS 265
++ A ++N++ QEK V A+K+L L E +L LE QS
Sbjct: 81 NINAMKSENLQYQTQSHQEKKVFAEKKLQKLKENGAKLSLEIQS 124
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,448,611
Number of Sequences: 27539
Number of extensions: 278130
Number of successful extensions: 931
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 917
Number of HSP's gapped (non-prelim): 15
length of query: 338
length of database: 12,573,161
effective HSP length: 82
effective length of query: 256
effective length of database: 10,314,963
effective search space: 2640630528
effective search space used: 2640630528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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