Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000921-TA|BGIBMGA000921-PA|undefined
(196 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65270.3 68414.m07401 expressed protein 59 2e-09
At1g65270.2 68414.m07400 expressed protein 59 2e-09
At1g65270.1 68414.m07399 expressed protein 59 2e-09
At3g11920.1 68416.m01461 glutaredoxin-related contains INTERPRO ... 30 0.90
At5g40380.1 68418.m04898 protein kinase family protein contains ... 29 1.6
At3g15250.1 68416.m01926 expressed protein ; expression supporte... 29 2.8
At2g16365.2 68415.m06033 F-box family protein contains Pfam:PF00... 29 2.8
At2g16365.1 68415.m06032 F-box family protein contains Pfam:PF00... 29 2.8
At1g51370.1 68414.m05779 F-box family protein contains F-box dom... 29 2.8
At5g49930.1 68418.m06182 zinc knuckle (CCHC-type) family protein... 28 3.6
At3g42722.1 68416.m04458 F-box family protein contains F-box dom... 28 3.6
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 3.6
At3g16130.1 68416.m02037 expressed protein contains Pfam profile... 28 3.6
At2g30380.1 68415.m03697 expressed protein contains Pfam profile... 28 4.8
At3g56360.1 68416.m06268 expressed protein unknown protein 110K5... 27 6.4
At1g13635.1 68414.m01602 methyladenine glycosylase family protei... 27 6.4
At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identic... 27 8.4
At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identic... 27 8.4
At3g55060.1 68416.m06115 expressed protein contains weak similar... 27 8.4
At3g30640.1 68416.m03878 Ulp1 protease family protein contains P... 27 8.4
At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 8.4
At1g32350.1 68414.m03988 alternative oxidase, putative similar t... 27 8.4
>At1g65270.3 68414.m07401 expressed protein
Length = 292
Score = 58.8 bits (136), Expect = 2e-09
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 37 FNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEY-LSSVKAQAFLENGLSDVINAWIL 95
F+ + +A K L D+FY I+ + G E+ ++SV+A+ +GL + + I
Sbjct: 119 FSAEEKDAFKNLLKGDDFYRIRLPSNV-VSPPGREFVIASVRARCLPRDGLDE--HFIIH 175
Query: 96 PNGA-VIAVNFQVANSTQPLKQAT--NEYKLNSKFYLRYIEQAPVPDTASYIQKMERDRE 152
GA ++AV++ + Q +Q ++ NS L+ EQAP T + +++
Sbjct: 176 MEGANILAVSYGSPGACQYPRQLKLPAKWSFNSHTILKSSEQAP--RTPIFTEEILGSEN 233
Query: 153 AREKGEMKDNRSFLAKYWMYIVPVAIFVM--ISGATNPEASAPAG 195
+ E RSF AKYWMY++P+ + VM ++ A+N A PAG
Sbjct: 234 VEGEVEPPPERSFWAKYWMYLIPLGLVVMNAVTQASN-MAEEPAG 277
>At1g65270.2 68414.m07400 expressed protein
Length = 292
Score = 58.8 bits (136), Expect = 2e-09
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 37 FNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEY-LSSVKAQAFLENGLSDVINAWIL 95
F+ + +A K L D+FY I+ + G E+ ++SV+A+ +GL + + I
Sbjct: 119 FSAEEKDAFKNLLKGDDFYRIRLPSNV-VSPPGREFVIASVRARCLPRDGLDE--HFIIH 175
Query: 96 PNGA-VIAVNFQVANSTQPLKQAT--NEYKLNSKFYLRYIEQAPVPDTASYIQKMERDRE 152
GA ++AV++ + Q +Q ++ NS L+ EQAP T + +++
Sbjct: 176 MEGANILAVSYGSPGACQYPRQLKLPAKWSFNSHTILKSSEQAP--RTPIFTEEILGSEN 233
Query: 153 AREKGEMKDNRSFLAKYWMYIVPVAIFVM--ISGATNPEASAPAG 195
+ E RSF AKYWMY++P+ + VM ++ A+N A PAG
Sbjct: 234 VEGEVEPPPERSFWAKYWMYLIPLGLVVMNAVTQASN-MAEEPAG 277
>At1g65270.1 68414.m07399 expressed protein
Length = 292
Score = 58.8 bits (136), Expect = 2e-09
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 37 FNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEY-LSSVKAQAFLENGLSDVINAWIL 95
F+ + +A K L D+FY I+ + G E+ ++SV+A+ +GL + + I
Sbjct: 119 FSAEEKDAFKNLLKGDDFYRIRLPSNV-VSPPGREFVIASVRARCLPRDGLDE--HFIIH 175
Query: 96 PNGA-VIAVNFQVANSTQPLKQAT--NEYKLNSKFYLRYIEQAPVPDTASYIQKMERDRE 152
GA ++AV++ + Q +Q ++ NS L+ EQAP T + +++
Sbjct: 176 MEGANILAVSYGSPGACQYPRQLKLPAKWSFNSHTILKSSEQAP--RTPIFTEEILGSEN 233
Query: 153 AREKGEMKDNRSFLAKYWMYIVPVAIFVM--ISGATNPEASAPAG 195
+ E RSF AKYWMY++P+ + VM ++ A+N A PAG
Sbjct: 234 VEGEVEPPPERSFWAKYWMYLIPLGLVVMNAVTQASN-MAEEPAG 277
>At3g11920.1 68416.m01461 glutaredoxin-related contains INTERPRO
Domain IPR002109, Glutaredoxin (thioltransferase)
Length = 630
Score = 30.3 bits (65), Expect = 0.90
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 26 RTGVPIIDQILFNEKH---LEALKKLANEDEF 54
RTG + QI FNEKH L AL L N EF
Sbjct: 202 RTGSSQVPQIFFNEKHFGGLMALNSLRNSGEF 233
>At5g40380.1 68418.m04898 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 591
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 53 EFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWILPNGAVIAVNFQVANSTQ 112
+F + KT K T+Y S K L G + + ILPNG +AV V N+
Sbjct: 235 KFNNSKTKFKYETLEKATDYFSHKK---MLGQGGNGTVFLGILPNGKNVAVKRLVFNTRD 291
Query: 113 PLKQATNEYKLNS 125
+++ NE L S
Sbjct: 292 WVEEFFNEVNLIS 304
>At3g15250.1 68416.m01926 expressed protein ; expression supported
by MPSS
Length = 217
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 110 STQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKY 169
+ P+ Q + KL R + ++SY + R+A E RS+ ++
Sbjct: 105 NNSPINQEPLDLKLKPPIS-RCDKTVNTMSSSSYSSPQHKRRKAMEMATTSLYRSYSSQR 163
Query: 170 WMYIVPVAI 178
W YI PV +
Sbjct: 164 WQYITPVPV 172
>At2g16365.2 68415.m06033 F-box family protein contains Pfam:PF00646
F-box domain
Length = 455
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 100 VIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTAS-----YIQKMERDREAR 154
V +VN +S Q LK +T KL K + Y++ P D + +Q +E ++ +
Sbjct: 144 VDSVNLPKEDSHQLLKGSTVSMKLKGKIFGGYLDLFPNQDHSHNRGGVRLQSLESSKDTQ 203
Query: 155 EKGEMKDNRS 164
E G K+ S
Sbjct: 204 EDGPRKNESS 213
>At2g16365.1 68415.m06032 F-box family protein contains Pfam:PF00646
F-box domain
Length = 778
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 100 VIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTAS-----YIQKMERDREAR 154
V +VN +S Q LK +T KL K + Y++ P D + +Q +E ++ +
Sbjct: 144 VDSVNLPKEDSHQLLKGSTVSMKLKGKIFGGYLDLFPNQDHSHNRGGVRLQSLESSKDTQ 203
Query: 155 EKGEMKDNRS 164
E G K+ S
Sbjct: 204 EDGPRKNESS 213
>At1g51370.1 68414.m05779 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 105 FQVANSTQPLKQATNEYKLNSKFYLRYIEQAPV-----PDTASYIQKMERDREAREKGEM 159
F + + ++PL Q LN++FY+ +E P P S I +M +++ R GE
Sbjct: 293 FFLYSKSRPLLQFRYISHLNARFYISDLEMLPTLLESCPKLESLILEMVKNQSTRRHGEK 352
Query: 160 KD 161
++
Sbjct: 353 RE 354
>At5g49930.1 68418.m06182 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 1080
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 76 VKAQAFLENGLSDVINAWILPNGAVIAVNFQVANSTQP----LKQATNEY--KLNSKFYL 129
V+A E+ L D+IN +P G ++ +AN T +K+ +E+ L ++F
Sbjct: 264 VQAVIVFEDWLEDIINGQKVPEGYILMQKQILANDTTSESGGVKKMYDEFCSILLNQFKS 323
Query: 130 RYIEQAPVPDTA--SYIQKMERDREAREKGEMKDNRS 164
R E+ D A + K+E R +++ +D+ S
Sbjct: 324 RVYEKFETFDAALDEFYSKIESQRSEQQQKAKEDSAS 360
>At3g42722.1 68416.m04458 F-box family protein contains F-box
domain Pfam:PF00646 ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 129
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 5 HSLNCNDEKFCHRGSITLKSIRTGVPIIDQILFNEKHLEALKKLA 49
H+L+CND FCH KS R + + L N + +KKL+
Sbjct: 45 HNLDCNDSIFCHPRKNKRKSFRY---FLYKTLANLEGYSRIKKLS 86
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 28.3 bits (60), Expect = 3.6
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 58 KTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWILPNGAVIAVNFQVANSTQPLKQA 117
K+T T E + T+ S + L G ++ ILPNG IAV A S Q ++
Sbjct: 322 KSTFTYDELAAATQGFSQSR---LLGQGGFGYVHKGILPNGKEIAVKSLKAGSGQGEREF 378
Query: 118 TNEYKLNSKFYLRYI 132
E + S+ + R++
Sbjct: 379 QAEVDIISRVHHRFL 393
>At3g16130.1 68416.m02037 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 576
Score = 28.3 bits (60), Expect = 3.6
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 16/111 (14%)
Query: 38 NEKHLEALKKLANEDEFYSIKTTITTGENSKGTE-----YLSSVKAQAFLENGLSDVINA 92
+E L+ L K ++DEFY + ENS T +L VK GLS+ +
Sbjct: 239 DEMLLDCLDKFKDQDEFYYVTPGSPESENSNSTRNDDKWWLPIVKVP---PKGLSETLKR 295
Query: 93 WILPNGAVIAVNFQVANSTQPL-KQATNEYKLNSKFYLRYIEQAPVPDTAS 142
++L + QV NS + Q E ++ YI+ P AS
Sbjct: 296 FLLSQRECVC---QVLNSAMAINSQVLTEMEIPES----YIDSLPKKGRAS 339
>At2g30380.1 68415.m03697 expressed protein contains Pfam profile
PF04859: Plant protein of unknown function (DUF641);
expression supported by MPSS
Length = 519
Score = 27.9 bits (59), Expect = 4.8
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 34 QILFNEKHLEALKK--LANEDEFYSI--KTTITTGENSKGTEYLSSVKAQAFLENGLSDV 89
+I NEKHLE LK A E E +S+ K EN K + SV + F S
Sbjct: 150 EIEVNEKHLEKLKAQVRAKESEIHSLIKKQECLVAENRKLENRIVSVSSFEFAFRAASKS 209
Query: 90 INAWILP 96
++ + P
Sbjct: 210 VHDFAKP 216
>At3g56360.1 68416.m06268 expressed protein unknown protein 110K5.12
- Sorghum bicolor, TREMBL:AF124045_5
Length = 233
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 55 YSIKTT-ITTGENSKGTEYLSSVKAQAFLENGLSDVINAWILPNG 98
Y +KTT + +G + T + VK ++F E +S + N+W++ G
Sbjct: 189 YLLKTTRVRSGMGTVCTHFCL-VKVKSFRETAMSQLNNSWLVQTG 232
>At1g13635.1 68414.m01602 methyladenine glycosylase family protein
Contains Pfam profile PF03352: Methyladenine
glycosylase
Length = 311
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 147 MERDREAREKGEMKDNRSFLAKYWMYIVPVAI 178
+E+ + REK E+K N +F AK+ I P+ +
Sbjct: 12 VEKSKSVREK-EIKQNSNFFAKHLKRIYPITL 42
>At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 483
Score = 27.1 bits (57), Expect = 8.4
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 95 LPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYIQKMERDREAR 154
L N A +A + + Q L+ N Y LNS F+ P+PD + K ++ +A
Sbjct: 122 LGNWAEVAEHVGTKSKEQCLEHYRNIY-LNSPFF-------PLPDMSHVAGKNRKELQAM 173
Query: 155 EKGEMKDNRS 164
KG + D ++
Sbjct: 174 AKGRIDDKKA 183
>At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 487
Score = 27.1 bits (57), Expect = 8.4
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 95 LPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYIQKMERDREAR 154
L N A +A + + Q L+ N Y LNS F+ P+PD + K ++ +A
Sbjct: 122 LGNWAEVAEHVGTKSKEQCLEHYRNIY-LNSPFF-------PLPDMSHVAGKNRKELQAM 173
Query: 155 EKGEMKDNRS 164
KG + D ++
Sbjct: 174 AKGRIDDKKA 183
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 9 CNDEKFCHRGSITLKSIRTGVP--IIDQILFNEKHLEALKKLAN 50
C +KF H S + S + V ++D+ + E+HLE K+ +N
Sbjct: 109 CKADKFQHDSSGSSSSCSSNVSSKVLDRYIDGEEHLEPCKQKSN 152
>At3g30640.1 68416.m03878 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 661
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 47 KLANEDEFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWI 94
KL+ + Y I + K +YLSS + LENG+ + I A++
Sbjct: 438 KLSPDGRIYDSMAPIDPVKLQKLKDYLSSPDCKKSLENGIDEQIAAYM 485
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.1 bits (57), Expect = 8.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 58 KTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWILPNGAVIAVNFQVANSTQPLKQA 117
K+T T E S+ T S L G ++ ILP+G +AV A S Q ++
Sbjct: 265 KSTFTYEELSRATNGFSEAN---LLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREF 321
Query: 118 TNEYKLNSKFYLRYI 132
E ++ S+ + R++
Sbjct: 322 QAEVEIISRVHHRHL 336
>At1g32350.1 68414.m03988 alternative oxidase, putative similar to
Alternative oxidase 1a, mitochondrial precursor from
Arabidopsis thaliana [SP|Q39219], alternative oxidase 2,
mitochondrial precursor from Nicotiana tabacum
[SP|Q40578]; contains Pfam profile PF01786 Alternative
oxidase
Length = 318
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 70 TEYLSSVKAQAFLENGLSDV-INAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFY 128
TE+L + A F + + I+ W LP A + V + + + N Y + +F
Sbjct: 245 TEFLKDIDAGKFENSPAPAIAIDYWRLPKDATLRDVVYVIRADEAHHRDINHYASDIQFK 304
Query: 129 LRYIEQAPVP 138
+++AP P
Sbjct: 305 GHELKEAPAP 314
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,484,469
Number of Sequences: 28952
Number of extensions: 174004
Number of successful extensions: 520
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 513
Number of HSP's gapped (non-prelim): 22
length of query: 196
length of database: 12,070,560
effective HSP length: 77
effective length of query: 119
effective length of database: 9,841,256
effective search space: 1171109464
effective search space used: 1171109464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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