Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000921-TA|BGIBMGA000921-PA|undefined
(196 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC622.01c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 31 0.086
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 29 0.35
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 29 0.46
SPBC21H7.07c |his5||imidazoleglycerol phosphate dehydratase|Schi... 29 0.46
SPAC19D5.02c |||peroxisomal membrane protein Pex22 |Schizosaccha... 27 1.4
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 27 2.4
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 25 5.6
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 25 5.6
SPAC1B2.04 |cox6||cytochrome c oxidase subunit VI|Schizosaccharo... 25 7.4
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 25 7.4
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 7.4
SPAC1782.03 |||microfibrillar-associated protein family protein|... 25 9.8
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 25 9.8
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 25 9.8
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 9.8
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 25 9.8
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 25 9.8
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 25 9.8
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 25 9.8
>SPCC622.01c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 149
Score = 31.5 bits (68), Expect = 0.086
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 105 FQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYIQKMERDREAREKGEM 159
FQ+ + Q + +E LN+ Y Y E+ P P S ++ E + E E EM
Sbjct: 89 FQLVDERQIEEPGEDEMALNAGGYYPYAEEVPPPSYPSLEEENEGNEEIEESEEM 143
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 29.5 bits (63), Expect = 0.35
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 84 NGLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYK 122
NG+ V+N W+L NG I + +A++ +K+ T K
Sbjct: 653 NGIQRVVNYWLLHNGFSIGIGDTIADA-DTMKEVTRTVK 690
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 29.1 bits (62), Expect = 0.46
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 71 EYLSSVKAQAFLENGLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLR 130
E +S++ +A ++ V A +LP+G +AV Q + + + YK Y +
Sbjct: 175 EVFASIEKRAAASASIAQVHRA-VLPSGEKVAVKIQKPDVAKQMSWDLLVYKYMMYVYDK 233
Query: 131 YIEQAPVPDTASYIQKMER 149
+I P+ T Y+ + R
Sbjct: 234 WIFHIPLYFTVDYVSERLR 252
>SPBC21H7.07c |his5||imidazoleglycerol phosphate
dehydratase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 29.1 bits (62), Expect = 0.46
Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 114 LKQATNEYKLNSKFYLRYIEQAPVPDTASYIQKMERDREAREKGE 158
+++ TNE K++ L ++AP+P+ +++I ++ + A +KGE
Sbjct: 6 VERNTNETKISVAIAL---DKAPLPEESNFIDELITSKHANQKGE 47
>SPAC19D5.02c |||peroxisomal membrane protein Pex22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 223
Score = 27.5 bits (58), Expect = 1.4
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 161 DNRSFLAKYWMYIVPVAIFVMISG 184
+ ++F KY +Y++P+ +++SG
Sbjct: 188 EEKTFFQKYGLYLIPILFLIIMSG 211
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 98 GAVIAVNFQVANSTQPLKQATNEYKLNSKF 127
GA IAV++ + T + ++ NE ++ S F
Sbjct: 251 GATIAVSWAITRGTSVIPKSVNEQRIKSNF 280
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 22 LKSIRTGVPIIDQILFNEKHL 42
L +R +PI+D+ F EKHL
Sbjct: 1380 LNFLRNFIPILDEQKFREKHL 1400
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 83 ENGLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKL 123
EN + + ++PNG IAVN Q N LK A E+KL
Sbjct: 477 ENRFGESVTVDLIPNGRNIAVNNQ--NKMNYLK-ALTEHKL 514
>SPAC1B2.04 |cox6||cytochrome c oxidase subunit
VI|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 25.0 bits (52), Expect = 7.4
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 49 ANEDEFYSIKTTITTGE-NSKGTEYLSSVKAQAFLENGLSDVINAWILPNGAVIAVNFQV 107
AN +S ++ E N+K ++ S+V+ Q L+ GL++ I+P+ VI +
Sbjct: 30 ANRQVRFSSNHGVSLEEINTKYNDFFSNVQDQFELQRGLNNCFAYDIVPSSDVIEQALRA 89
Query: 108 ANSTQPLKQATNEYK 122
A A ++
Sbjct: 90 ARRVNDFPTAVRIFE 104
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 66 NSKGTEYLSSVKAQAFLENGLSDVINAWILPNGAVIAVNFQVA 108
NS G E++ S + L + L I+ W PN + ++ F ++
Sbjct: 121 NSIGAEFVGSTSSLTGLMSQLHFFISKWKFPNFSDLSKGFYIS 163
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 61 ITTGENSKGTEYLSSVKAQAFLENGLSDVINAWILPN 97
+ EN+KG+E S K +++ S ++N ++ P+
Sbjct: 246 LANSENNKGSEAGVSAKTNPDMDSDSSAIVNEFLKPD 282
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 149 RDREAREKGEMKDNRSFLAKYW 170
+D EA +G+ K + FL KY+
Sbjct: 239 KDAEASRRGKKKSSMQFLQKYY 260
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 20 ITLKSIRTGVPIIDQILFNEKHLEALKKLANEDEFYS 56
+ + I T I+ L + KH+EA +LA FYS
Sbjct: 82 LQILGIATSYTILRSWLLSRKHIEAWIELAIRRMFYS 118
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 136 PVPDTASYIQKMERDREAREKGEMKDNRSF 165
P D + +MER+R+ RE E+++ + +
Sbjct: 375 PSDDDKRIMAEMERERKEREAAELEEAKKY 404
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 27 TGVPIIDQILFNEKHLEALKKLANEDEFY 55
TG+ I DQ + N+ +++ L + + +FY
Sbjct: 102 TGLWIADQFILNQDNIQCLLQSISHKDFY 130
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 81 FLENGLSDVINAWILPNGAVIAVNFQV 107
F + GL+++IN + LP G VN +V
Sbjct: 155 FTKEGLNNLINTFSLPGGFPSHVNAEV 181
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 131 YIEQAPVPDTASYIQKMERDREAREKGEMKDNRSF 165
YIE+ PD +Y+ +ER+ E+ + ++
Sbjct: 68 YIEEEEDPDLEAYLSDLEREELEHSLEELDEENNY 102
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 24.6 bits (51), Expect = 9.8
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 142 SYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNPEASAPAG 195
S+ Q R + E+ E KD+ + L K MY + VA + ++ + + A G
Sbjct: 392 SFPQYRNRFAKINERFEEKDSANDLLKMQMYFLDVAYELSLAKKRSSKVQAGLG 445
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 134 QAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKY 169
+AP+ T +Q + + +++KG M +RS + Y
Sbjct: 428 RAPLAMTPDLLQDLTEYKSSKDKGVMMASRSLITLY 463
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.131 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 910,164
Number of Sequences: 5004
Number of extensions: 37444
Number of successful extensions: 118
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 101
Number of HSP's gapped (non-prelim): 19
length of query: 196
length of database: 2,362,478
effective HSP length: 69
effective length of query: 127
effective length of database: 2,017,202
effective search space: 256184654
effective search space used: 256184654
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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