GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000921-TA|BGIBMGA000921-PA|undefined
         (196 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   3.5  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   6.1  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   8.1  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 93  WILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFY 128
           WI P  ++ A  ++  NST+P++   +   L  KFY
Sbjct: 143 WIAPIPSICAHYYRSTNSTEPVRFVQH---LEVKFY 175


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 93  WILPNGAVIAVNFQVANSTQPLK 115
           W +P     +  F V NST+P++
Sbjct: 160 WFMPVWTTYSAYFAVRNSTEPVE 182


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 73   LSSVKAQAFLENGLSDVINAWILPNGA-VIAVNFQVANSTQPLKQATNEYKLN 124
            L+S    A LEN ++ V +A ++ NG   ++      N+   L  AT    LN
Sbjct: 985  LTSYVLTALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMMLN 1037


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,263
Number of Sequences: 2123
Number of extensions: 7210
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 196
length of database: 516,269
effective HSP length: 61
effective length of query: 135
effective length of database: 386,766
effective search space: 52213410
effective search space used: 52213410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)