Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000919-TA|BGIBMGA000919-PA|IPR001214|SET
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 40 0.007
09_02_0368 - 7984894-7984905,7985250-7985301,7985947-7985969,798... 39 0.012
02_04_0581 - 24068122-24068355,24068693-24068906,24069675-240697... 38 0.027
03_01_0482 - 3686954-3688564 37 0.047
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 35 0.19
08_01_0695 + 6148873-6150051 35 0.19
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 35 0.19
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 33 0.77
09_04_0537 + 18410201-18410207,18410301-18410586,18410674-184107... 33 1.0
10_07_0166 - 13746208-13746326,13746461-13746532,13746925-137471... 31 2.3
03_01_0448 - 3444608-3444814,3446419-3446497,3446567-3446691,344... 31 3.1
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 30 7.2
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 29 9.5
>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 39.9 bits (89), Expect = 0.007
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 193 GPAAYINHDCRPTCT---FEATDRGKAFVRVLRDIEPGEEITCYY---GEDFFGNSNCYC 246
G A +INH C+P C + K R I PGEEIT Y ED C+C
Sbjct: 1695 GIARFINHSCQPNCVAKIISVRNEKKVVFFAERHINPGEEITYDYHFNREDEGQRIPCFC 1754
Query: 247 ECETCER 253
C R
Sbjct: 1755 RSRGCRR 1761
>09_02_0368 -
7984894-7984905,7985250-7985301,7985947-7985969,
7987006-7987071,7987155-7987206,7987617-7987820,
7987937-7988017,7988103-7988236
Length = 207
Score = 39.1 bits (87), Expect = 0.012
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 197 YINHDCRPTCTFEA-TDRGKAFVRV--LRDIEPGEEITCYYGEDFFG-NSNCYCECETCE 252
+INH C P + T G+ V + LRDI+ GEE+T Y FG + +C+C C
Sbjct: 31 FINHSCEPNTEMQKWTVEGETRVGIFALRDIKTGEELTYDYKFVQFGADQDCHCGSSNCR 90
Query: 253 R 253
+
Sbjct: 91 K 91
>02_04_0581 -
24068122-24068355,24068693-24068906,24069675-24069755,
24069853-24070024,24070806-24070884,24071384-24071477,
24072065-24072147,24072284-24072401,24072457-24072461
Length = 359
Score = 37.9 bits (84), Expect = 0.027
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 197 YINHDCRPTCTFEATD-RGKAFVRVL--RDIEPGEEITCYYGEDFFGNS-NCYCECETCE 252
++NH C P C E G+ V V R I+ GE +T Y FG CYC + C+
Sbjct: 170 FLNHSCDPNCKLEKWQVDGETRVGVFASRSIQVGEHLTYDYRFVHFGEKVKCYCGAQNCQ 229
>03_01_0482 - 3686954-3688564
Length = 536
Score = 37.1 bits (82), Expect = 0.047
Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 186 NCAQ-LWLGPAAYINHDCRPTCTFEATDRGK-AFVRVLRDIEPGEEITCYY 234
NC LW+ PA +INH C P T G A V RDI+ GEEIT Y
Sbjct: 309 NCGVGLWILPA-FINHSCHPNA--RRTHVGDHAIVHASRDIKAGEEITFAY 356
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 35.1 bits (77), Expect = 0.19
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 149 ERIDFLVGCIAEMTEEE--EKQLLHPGKNDFSVMYSCRKNC-----AQLWLGPAAYINHD 201
E+ DF++ + E+ ++E E++L + Y C+ A + NH
Sbjct: 396 EKDDFVIEFVGEVIDDETCEERLEDMRRRGDKNFYMCKVKKDFVIDATFKGNDCRFFNHS 455
Query: 202 CRPTCTFEATD-RGKAFVRVL--RDIEPGEEITC-YYGEDFFG-NSNCYCECETCE 252
C P C + GK + V + IE GE +T Y E +G C+C + C+
Sbjct: 456 CEPNCQLQKWQVNGKTRLGVFASKAIEVGEPLTYDYRFEQHYGPEIECFCGAQNCQ 511
>08_01_0695 + 6148873-6150051
Length = 392
Score = 35.1 bits (77), Expect = 0.19
Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 16/102 (15%)
Query: 195 AAYINHDCRPT-CTFEATDR---GKA--FVRVLRDIEPGEEITCYY----------GEDF 238
A+ +NHDC P C F+ DR G VR L DI G E+ Y +
Sbjct: 206 ASLLNHDCLPNACHFDYADRPGPGNTDIVVRALHDITEGREVCLSYFAANWQYKDRQQRL 265
Query: 239 FGNSNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETDN 280
+ CECE C+ K +S D T E N
Sbjct: 266 LEDYGFRCECERCQVESKWKQDDDSDGGDGDDTMEEEEEDGN 307
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 35.1 bits (77), Expect = 0.19
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 195 AAYINHDCRPTC-TFEATDRGKAFVRVL--RDIEPGEEITCYYGEDFFGNSNCYCECETC 251
A +INH C+P C T + G+ V + +DI G E++ Y ++FG + C C
Sbjct: 231 ARFINHSCQPNCETRKWNVLGEVRVGIFAKQDIPIGTELSYDYNFEWFGGAMVRCLCGAG 290
Query: 252 ERRGKGAFSVESSHNDEQSTRYRFRETDNRIN 283
G F S +++T Y + + D+R +
Sbjct: 291 SCSG---FLGAKSRGFQEAT-YLWEDDDDRFS 318
>02_05_0473 + 29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 33.1 bits (72), Expect = 0.77
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 197 YINHDCRPTCT-----FEATDRGKAFVRVL--RDIEPGEEITCYYGEDFFGNSNCYCECE 249
+INH C P + E+ D A + + +DI GEE+ YG+ C C C
Sbjct: 1090 FINHSCSPNLSTRLVSVESKDCQLAHIGLFANQDILMGEELAYDYGQKLLPGDGCPCHCG 1149
Query: 250 TCERRGK 256
RG+
Sbjct: 1150 AKNCRGR 1156
>09_04_0537 +
18410201-18410207,18410301-18410586,18410674-18410773,
18410881-18411147,18411286-18411363,18411444-18411545,
18411628-18411677,18411793-18411889,18412248-18412361,
18412495-18412666,18412865-18413217,18413812-18413898,
18413981-18414001
Length = 577
Score = 32.7 bits (71), Expect = 1.0
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 241 NSNCYCECETCERRGKGAFSVESSHNDEQST 271
+S+ +C CE+C+R+G + ESS + +QS+
Sbjct: 372 DSSTFCSCESCDRKGLPDVTPESSQSVQQSS 402
>10_07_0166 -
13746208-13746326,13746461-13746532,13746925-13747104,
13747737-13747785
Length = 139
Score = 31.5 bits (68), Expect = 2.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 196 AYINHDCRPTCTFEATDRGKAFVRVLRDIEPGEEI-TCY 233
++ NHDC P A ++ LR+IE GEE+ CY
Sbjct: 70 SFYNHDCDPNTHIVWLASADARLKALRNIEEGEELRICY 108
>03_01_0448 -
3444608-3444814,3446419-3446497,3446567-3446691,
3446765-3446809,3447070-3447165,3447344-3447417,
3447526-3447649,3447975-3448109,3448206-3448535,
3448610-3448762,3448840-3449391,3449569-3449648,
3450395-3450506,3450579-3450749,3450820-3450879
Length = 780
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 464 DIKPDLPIVNDNEHSSDLNSFVYTDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESK 523
+++ D PI++DNE SF Y + H+ ++KE + D + +D I+S
Sbjct: 422 ELENDYPILSDNEEIDAQQSFAYANDHMPYGTDNEKEK--DDDRELNQCEDDHETKIKSP 479
Query: 524 SKV 526
+K+
Sbjct: 480 AKI 482
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 29.9 bits (64), Expect = 7.2
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 8/63 (12%)
Query: 195 AAYINHDCRPTC---TFEATDRGKAFVRVLRDIEPGEEITCYYGEDFFGNSN---CYCEC 248
A INH C P C + RDI P EE+T Y F + CYC
Sbjct: 926 AHLINHSCEPNCYSRVISVLGDEHIIIFAKRDINPWEELT--YDYRFVSSDQRLPCYCGF 983
Query: 249 ETC 251
C
Sbjct: 984 PKC 986
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 29.5 bits (63), Expect = 9.5
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 253 RRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQNSSI 312
R+GK ++ S D + F E+D+ +R K K S N DK R + ++
Sbjct: 376 RKGK---RMDDSDTDSEGDG-SFSESDSDYDRKKKKSTNSSRNESKDDKPRRKAPKDKYS 431
Query: 313 VSPLSMKEMKQKGLTKY 329
P S + G +KY
Sbjct: 432 DGPESGSDSDHGGKSKY 448
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,965,657
Number of Sequences: 37544
Number of extensions: 758549
Number of successful extensions: 1311
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1305
Number of HSP's gapped (non-prelim): 14
length of query: 697
length of database: 14,793,348
effective HSP length: 87
effective length of query: 610
effective length of database: 11,527,020
effective search space: 7031482200
effective search space used: 7031482200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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